RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 RPS18P62269 152 aaKnown RBP14.46□□□□□ -0.1
VARS2-212ENST00000542001 ZNF141Q15928 474 aa14.46□□□□□ -0.1
VARS2-212ENST00000542001 AKR7LQ8NHP1 331 aa14.46□□□□□ -0.1
VARS2-212ENST00000542001 UBALD1Q8TB05 177 aa14.46□□□□□ -0.1
VARS2-212ENST00000542001 TCRBV16S1A1N1A0A5B0 115 aa14.45□□□□□ -0.1
VARS2-212ENST00000542001 MED19A0JLT2 244 aaPredicted RBP14.45□□□□□ -0.1
VARS2-212ENST00000542001 SLC17A2O00624 439 aa14.45□□□□□ -0.1
VARS2-212ENST00000542001 MED6O75586 246 aa14.45□□□□□ -0.1
VARS2-212ENST00000542001 ADH6P28332 368 aa14.45□□□□□ -0.1
VARS2-212ENST00000542001 DUSP3P51452 185 aaPredicted RBP14.45□□□□□ -0.1
VARS2-212ENST00000542001 CLINT1Q14677 625 aa14.45□□□□□ -0.1
VARS2-212ENST00000542001 RSPO4Q2I0M5 234 aaPredicted RBP14.45□□□□□ -0.1
VARS2-212ENST00000542001 OR2AE1Q8NHA4 323 aa14.45□□□□□ -0.1
VARS2-212ENST00000542001 LIN37Q96GY3 246 aaPredicted RBP14.45□□□□□ -0.1
VARS2-212ENST00000542001 TAS2R5Q9NYW4 299 aa14.45□□□□□ -0.1
VARS2-212ENST00000542001 SCN8AQ9UQD0 1980 aa14.45□□□□□ -0.1
VARS2-212ENST00000542001 SLC22A23A1A5C7 686 aa14.45□□□□□ -0.1
VARS2-212ENST00000542001 TSPAN15O95858 294 aa14.45□□□□□ -0.1
VARS2-212ENST00000542001 SSR4P51571 173 aa14.45□□□□□ -0.1
VARS2-212ENST00000542001 LTC4SQ16873 150 aa14.45□□□□□ -0.1
VARS2-212ENST00000542001 ZNF813Q6ZN06 617 aa14.45□□□□□ -0.1
VARS2-212ENST00000542001 ATG4DQ86TL0 474 aaPredicted RBP14.45□□□□□ -0.1
VARS2-212ENST00000542001 MESP1Q9BRJ9 268 aa14.45□□□□□ -0.1
VARS2-212ENST00000542001 ELF5Q9UKW6 265 aaPredicted RBP14.45□□□□□ -0.1
VARS2-212ENST00000542001 ATP6V1G2-DDX39BF2Z307 99 aa14.45□□□□□ -0.1
VARS2-212ENST00000542001 TNFSF14O43557 240 aa14.45□□□□□ -0.1
VARS2-212ENST00000542001 CXCL13O43927 109 aa14.45□□□□□ -0.1
VARS2-212ENST00000542001 CTAG2O75638 210 aa14.45□□□□□ -0.1
VARS2-212ENST00000542001 ZBTB44Q8NCP5 570 aa14.45□□□□□ -0.1
VARS2-212ENST00000542001 DUSP23Q9BVJ7 150 aa14.45□□□□□ -0.1
VARS2-212ENST00000542001 S1PR5Q9H228 398 aa14.45□□□□□ -0.1
VARS2-212ENST00000542001 RGCCQ9H4X1 137 aa14.45□□□□□ -0.1
VARS2-212ENST00000542001 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.45□□□□□ -0.1
VARS2-212ENST00000542001 ST6GALNAC2Q9UJ37 374 aa14.45□□□□□ -0.1
VARS2-212ENST00000542001 MED13LQ71F56 2210 aa14.44□□□□□ -0.1
VARS2-212ENST00000542001 UBBP0CG47 229 aa14.44□□□□□ -0.1
VARS2-212ENST00000542001 B4GALT1P15291 398 aa14.44□□□□□ -0.1
VARS2-212ENST00000542001 SLC25A30Q5SVS4 291 aa14.44□□□□□ -0.1
VARS2-212ENST00000542001 PDSS1Q5T2R2 415 aa14.44□□□□□ -0.1
VARS2-212ENST00000542001 TIGD3Q6B0B8 471 aa14.44□□□□□ -0.1
VARS2-212ENST00000542001 FBXW12Q6X9E4 464 aa14.44□□□□□ -0.1
VARS2-212ENST00000542001 STK35Q8TDR2 534 aa14.44□□□□□ -0.1
VARS2-212ENST00000542001 C12orf49Q9H741 205 aa14.44□□□□□ -0.1
VARS2-212ENST00000542001 CA10Q9NS85 328 aa14.44□□□□□ -0.1
VARS2-212ENST00000542001 CSAG2Q9Y5P2 127 aa14.44□□□□□ -0.1
VARS2-212ENST00000542001 R4GMQ9 66 aa14.44□□□□□ -0.1
VARS2-212ENST00000542001 A0A0B4J293 547 aa14.44□□□□□ -0.1
VARS2-212ENST00000542001 TMEM272A0A1B0GTI8 110 aa14.44□□□□□ -0.1
VARS2-212ENST00000542001 ZNF254O75437 659 aa14.44□□□□□ -0.1
VARS2-212ENST00000542001 PET100P0DJ07 73 aa14.44□□□□□ -0.1
VARS2-212ENST00000542001 CBR1P16152 277 aa14.44□□□□□ -0.1
VARS2-212ENST00000542001 TUBG1P23258 451 aa14.44□□□□□ -0.1
VARS2-212ENST00000542001 CARD18P57730 90 aa14.44□□□□□ -0.1
VARS2-212ENST00000542001 EGR3Q06889 387 aa14.44□□□□□ -0.1
VARS2-212ENST00000542001 SP6Q3SY56 376 aa14.44□□□□□ -0.1
VARS2-212ENST00000542001 OR5L1Q8NGL2 311 aa14.44□□□□□ -0.1
VARS2-212ENST00000542001 NAT6Q93015 286 aa14.44□□□□□ -0.1
VARS2-212ENST00000542001 ZNF764Q96H86 408 aaPredicted RBP14.44□□□□□ -0.1
VARS2-212ENST00000542001 RSPO3Q9BXY4 272 aaPredicted RBP14.44□□□□□ -0.1
VARS2-212ENST00000542001 TMPRSS13Q9BYE2 586 aa14.44□□□□□ -0.1
VARS2-212ENST00000542001 OR4C45A6NMZ5 311 aa14.44□□□□□ -0.1
VARS2-212ENST00000542001 SNRNP70P08621 437 aaKnown RBP14.44□□□□□ -0.1
VARS2-212ENST00000542001 GIPP09681 153 aaPredicted RBP14.44□□□□□ -0.1
VARS2-212ENST00000542001 TMEM217Q8N7C4 229 aa14.44□□□□□ -0.1
VARS2-212ENST00000542001 OR56B1Q8NGI3 324 aa14.44□□□□□ -0.1
VARS2-212ENST00000542001 ARL11Q969Q4 196 aa14.44□□□□□ -0.1
VARS2-212ENST00000542001 TM4SF19Q96DZ7 209 aa14.44□□□□□ -0.1
VARS2-212ENST00000542001 CCDC74BQ96LY2 380 aa14.44□□□□□ -0.1
VARS2-212ENST00000542001 CCNL2Q96S94 520 aaPredicted RBP14.44□□□□□ -0.1
VARS2-212ENST00000542001 PKDREJQ9NTG1 2253 aa14.44□□□□□ -0.1
VARS2-212ENST00000542001 A0A1B0GUH1 482 aa14.43□□□□□ -0.1
VARS2-212ENST00000542001 ADAM10O14672 748 aa14.43□□□□□ -0.1
VARS2-212ENST00000542001 PIN1P1O15428 100 aa14.43□□□□□ -0.1
VARS2-212ENST00000542001 OGG1O15527 345 aa14.43□□□□□ -0.1
VARS2-212ENST00000542001 SPRY1O43609 319 aaPredicted RBP14.43□□□□□ -0.1
VARS2-212ENST00000542001 MRPL33O75394 65 aaKnown RBP14.43□□□□□ -0.1
VARS2-212ENST00000542001 DIRAS3O95661 229 aa14.43□□□□□ -0.1
VARS2-212ENST00000542001 PMS2P2O95744 297 aa14.43□□□□□ -0.1
VARS2-212ENST00000542001 TPT1P13693 172 aaKnown RBP14.43□□□□□ -0.1
VARS2-212ENST00000542001 IL9P15248 144 aa14.43□□□□□ -0.1
VARS2-212ENST00000542001 NAGAP17050 411 aa14.43□□□□□ -0.1
VARS2-212ENST00000542001 APOBEC1P41238 236 aaKnown RBP14.43□□□□□ -0.1
VARS2-212ENST00000542001 FAM209AQ5JX71 171 aa14.43□□□□□ -0.1
VARS2-212ENST00000542001 CLVS2Q5SYC1 327 aa14.43□□□□□ -0.1
VARS2-212ENST00000542001 SLC25A21Q9BQT8 299 aaPredicted RBP14.43□□□□□ -0.1
VARS2-212ENST00000542001 C20orf24Q9BUV8 137 aa14.43□□□□□ -0.1
VARS2-212ENST00000542001 NARFLQ9H6Q4 476 aa14.43□□□□□ -0.1
VARS2-212ENST00000542001 RPS10P5Q9NQ39 176 aa14.43□□□□□ -0.1
VARS2-212ENST00000542001 PI4KAP42356 2102 aa14.43□□□□□ -0.1
VARS2-212ENST00000542001 BORCS7-ASMTA0A0B4J1R7 106 aa14.43□□□□□ -0.1
VARS2-212ENST00000542001 LMX1BO60663 402 aa14.43□□□□□ -0.1
VARS2-212ENST00000542001 RRASP10301 218 aa14.43□□□□□ -0.1
VARS2-212ENST00000542001 LGALSLQ3ZCW2 172 aaPredicted RBP14.43□□□□□ -0.1
VARS2-212ENST00000542001 GPR157Q5UAW9 335 aa14.43□□□□□ -0.1
VARS2-212ENST00000542001 SIGIRRQ6IA17 410 aa14.43□□□□□ -0.1
VARS2-212ENST00000542001 Q7L0L9 218 aa14.43□□□□□ -0.1
VARS2-212ENST00000542001 GALNT16Q8N428 558 aa14.43□□□□□ -0.1
VARS2-212ENST00000542001 LSMEM1Q8N8F7 131 aa14.43□□□□□ -0.1
VARS2-212ENST00000542001 OR14J1Q9UGF5 321 aa14.43□□□□□ -0.1
VARS2-212ENST00000542001 PHF3Q92576 2039 aaKnown RBP14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms