RNA–Protein interactions for RNA: ENST00000541770.1

CLSTN3-212, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-212ENST00000541770 HGFACQ04756 655 aa7.44□□□□□ -1.22
CLSTN3-212ENST00000541770 ECH1Q13011 328 aa7.44□□□□□ -1.22
CLSTN3-212ENST00000541770 TMED1Q13445 227 aa7.44□□□□□ -1.22
CLSTN3-212ENST00000541770 ADIPOQQ15848 244 aa7.44□□□□□ -1.22
CLSTN3-212ENST00000541770 OCLNQ16625 522 aa7.44□□□□□ -1.22
CLSTN3-212ENST00000541770 PDLIM3Q53GG5 364 aaPredicted RBP7.44□□□□□ -1.22
CLSTN3-212ENST00000541770 ELFN2Q5R3F8 820 aa7.44□□□□□ -1.22
CLSTN3-212ENST00000541770 MEDAGQ5VYS4 303 aa7.44□□□□□ -1.22
CLSTN3-212ENST00000541770 OTPQ5XKR4 325 aa7.44□□□□□ -1.22
CLSTN3-212ENST00000541770 ZNF774Q6NX45 483 aa7.44□□□□□ -1.22
CLSTN3-212ENST00000541770 LYPD4Q6UWN0 246 aa7.44□□□□□ -1.22
CLSTN3-212ENST00000541770 RHOUQ7L0Q8 258 aa7.44□□□□□ -1.22
CLSTN3-212ENST00000541770 BCDIN3DQ7Z5W3 292 aaKnown RBP7.44□□□□□ -1.22
CLSTN3-212ENST00000541770 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.44□□□□□ -1.22
CLSTN3-212ENST00000541770 ERI1Q8IV48 349 aaKnown RBP7.44□□□□□ -1.22
CLSTN3-212ENST00000541770 C1orf174Q8IYL3 243 aa7.44□□□□□ -1.22
CLSTN3-212ENST00000541770 DHRSXQ8N5I4 330 aa7.44□□□□□ -1.22
CLSTN3-212ENST00000541770 OR6N2Q8NGY6 317 aa7.44□□□□□ -1.22
CLSTN3-212ENST00000541770 OR1F12Q8NHA8 337 aa7.44□□□□□ -1.22
CLSTN3-212ENST00000541770 RHOXF1Q8NHV9 184 aa7.44□□□□□ -1.22
CLSTN3-212ENST00000541770 UBASH3BQ8TF42 649 aa7.44□□□□□ -1.22
CLSTN3-212ENST00000541770 NRG4Q8WWG1 115 aa7.44□□□□□ -1.22
CLSTN3-212ENST00000541770 IPCEF1Q8WWN9 437 aaPredicted RBP7.44□□□□□ -1.22
CLSTN3-212ENST00000541770 NEU4Q8WWR8 484 aaPredicted RBP7.44□□□□□ -1.22
CLSTN3-212ENST00000541770 RFKQ969G6 155 aa7.44□□□□□ -1.22
CLSTN3-212ENST00000541770 DCLRE1CQ96SD1 692 aaKnown RBP7.44□□□□□ -1.22
CLSTN3-212ENST00000541770 COQ7Q99807 217 aa7.44□□□□□ -1.22
CLSTN3-212ENST00000541770 APOL4Q9BPW4 351 aa7.44□□□□□ -1.22
CLSTN3-212ENST00000541770 VCX3BQ9H321 246 aa7.44□□□□□ -1.22
CLSTN3-212ENST00000541770 TPK1Q9H3S4 243 aa7.44□□□□□ -1.22
CLSTN3-212ENST00000541770 PLK3Q9H4B4 646 aa7.44□□□□□ -1.22
CLSTN3-212ENST00000541770 ZNF442Q9H7R0 627 aa7.44□□□□□ -1.22
CLSTN3-212ENST00000541770 CDH20Q9HBT6 801 aa7.44□□□□□ -1.22
CLSTN3-212ENST00000541770 PNRC2Q9NPJ4 139 aaKnown RBP7.44□□□□□ -1.22
CLSTN3-212ENST00000541770 GRIP1Q9Y3R0 1128 aa7.44□□□□□ -1.22
CLSTN3-212ENST00000541770 SPEF1Q9Y4P9 236 aa7.44□□□□□ -1.22
CLSTN3-212ENST00000541770 VSTM5A8MXK1 200 aa7.43□□□□□ -1.22
CLSTN3-212ENST00000541770 B4DSR2 109 aa7.43□□□□□ -1.22
CLSTN3-212ENST00000541770 J3QW42 95 aa7.43□□□□□ -1.22
CLSTN3-212ENST00000541770 SPARCP09486 303 aa7.43□□□□□ -1.22
CLSTN3-212ENST00000541770 PSKH1P11801 424 aa7.43□□□□□ -1.22
CLSTN3-212ENST00000541770 GIFP27352 417 aa7.43□□□□□ -1.22
CLSTN3-212ENST00000541770 GLRXP35754 106 aa7.43□□□□□ -1.22
CLSTN3-212ENST00000541770 CAPGP40121 348 aa7.43□□□□□ -1.22
CLSTN3-212ENST00000541770 RPS27P42677 84 aaKnown RBP7.43□□□□□ -1.22
CLSTN3-212ENST00000541770 RPS23P62266 143 aaKnown RBP7.43□□□□□ -1.22
CLSTN3-212ENST00000541770 ADARB1P78563 741 aaKnown RBP7.43□□□□□ -1.22
CLSTN3-212ENST00000541770 GALK2Q01415 458 aa7.43□□□□□ -1.22
CLSTN3-212ENST00000541770 POU4F2Q12837 409 aa7.43□□□□□ -1.22
CLSTN3-212ENST00000541770 IL18R1Q13478 541 aa7.43□□□□□ -1.22
CLSTN3-212ENST00000541770 EFNB3Q15768 340 aa7.43□□□□□ -1.22
CLSTN3-212ENST00000541770 SNCBQ16143 134 aa7.43□□□□□ -1.22
CLSTN3-212ENST00000541770 KRTAP27-1Q3LI81 207 aa7.43□□□□□ -1.22
CLSTN3-212ENST00000541770 AWAT1Q58HT5 328 aa7.43□□□□□ -1.22
CLSTN3-212ENST00000541770 ZNF691Q5VV52 312 aa7.43□□□□□ -1.22
CLSTN3-212ENST00000541770 FAHD2BQ6P2I3 314 aaPredicted RBP7.43□□□□□ -1.22
CLSTN3-212ENST00000541770 CORO6Q6QEF8 472 aa7.43□□□□□ -1.22
CLSTN3-212ENST00000541770 UNQ6126/PRO20091Q6UXV3 157 aa7.43□□□□□ -1.22
CLSTN3-212ENST00000541770 CFAP77Q6ZQR2 320 aa7.43□□□□□ -1.22
CLSTN3-212ENST00000541770 SLC16A9Q7RTY1 509 aa7.43□□□□□ -1.22
CLSTN3-212ENST00000541770 DPY19L4Q7Z388 723 aa7.43□□□□□ -1.22
CLSTN3-212ENST00000541770 DCXRQ7Z4W1 244 aa7.43□□□□□ -1.22
CLSTN3-212ENST00000541770 LINC00346Q8IVM7 164 aa7.43□□□□□ -1.22
CLSTN3-212ENST00000541770 ENTHD1Q8IYW4 607 aa7.43□□□□□ -1.22
CLSTN3-212ENST00000541770 ZNF786Q8N393 782 aa7.43□□□□□ -1.22
CLSTN3-212ENST00000541770 PAQR4Q8N4S7 273 aaPredicted RBP7.43□□□□□ -1.22
CLSTN3-212ENST00000541770 ZNF454Q8N9F8 522 aa7.43□□□□□ -1.22
CLSTN3-212ENST00000541770 OTOSQ8NHW6 89 aa7.43□□□□□ -1.22
CLSTN3-212ENST00000541770 ST7LQ8TDW4 575 aa7.43□□□□□ -1.22
CLSTN3-212ENST00000541770 FAM216AQ8WUB2 273 aa7.43□□□□□ -1.22
CLSTN3-212ENST00000541770 UBE2FQ969M7 185 aa7.43□□□□□ -1.22
CLSTN3-212ENST00000541770 FAHD2AQ96GK7 314 aa7.43□□□□□ -1.22
CLSTN3-212ENST00000541770 MAP6Q96JE9 813 aa7.43□□□□□ -1.22
CLSTN3-212ENST00000541770 ZNF582Q96NG8 517 aaPredicted RBP7.43□□□□□ -1.22
CLSTN3-212ENST00000541770 MNTQ99583 582 aa7.43□□□□□ -1.22
CLSTN3-212ENST00000541770 ATF6BQ99941 703 aa7.43□□□□□ -1.22
CLSTN3-212ENST00000541770 ADI1Q9BV57 179 aa7.43□□□□□ -1.22
CLSTN3-212ENST00000541770 BCL2L14Q9BZR8 327 aa7.43□□□□□ -1.22
CLSTN3-212ENST00000541770 YIPF3Q9GZM5 350 aa7.43□□□□□ -1.22
CLSTN3-212ENST00000541770 RASSF4Q9H2L5 321 aa7.43□□□□□ -1.22
CLSTN3-212ENST00000541770 DDX28Q9NUL7 540 aaKnown RBP7.43□□□□□ -1.22
CLSTN3-212ENST00000541770 TBCCD1Q9NVR7 557 aa7.43□□□□□ -1.22
CLSTN3-212ENST00000541770 HIF1ANQ9NWT6 349 aa7.43□□□□□ -1.22
CLSTN3-212ENST00000541770 WARS2Q9UGM6 360 aaKnown RBP7.43□□□□□ -1.22
CLSTN3-212ENST00000541770 PCDHGB1Q9Y5G3 927 aa7.43□□□□□ -1.22
CLSTN3-212ENST00000541770 C5orf49A4QMS7 147 aa7.42□□□□□ -1.22
CLSTN3-212ENST00000541770 SNTNA6NMZ2 147 aa7.42□□□□□ -1.22
CLSTN3-212ENST00000541770 ZNF878C9JN71 531 aa7.42□□□□□ -1.22
CLSTN3-212ENST00000541770 SELENOFO60613 162 aa7.42□□□□□ -1.22
CLSTN3-212ENST00000541770 ENTPD6O75354 484 aa7.42□□□□□ -1.22
CLSTN3-212ENST00000541770 LYNP07948 512 aa7.42□□□□□ -1.22
CLSTN3-212ENST00000541770 ADRA2AP08913 450 aa7.42□□□□□ -1.22
CLSTN3-212ENST00000541770 CCL2P13500 99 aa7.42□□□□□ -1.22
CLSTN3-212ENST00000541770 EPHA1P21709 976 aa7.42□□□□□ -1.22
CLSTN3-212ENST00000541770 TUBG1P23258 451 aa7.42□□□□□ -1.22
CLSTN3-212ENST00000541770 OTX1P32242 354 aaPredicted RBP7.42□□□□□ -1.22
CLSTN3-212ENST00000541770 THBS4P35443 961 aa7.42□□□□□ -1.22
CLSTN3-212ENST00000541770 WNT5AP41221 380 aa7.42□□□□□ -1.22
CLSTN3-212ENST00000541770 RAD52P43351 418 aa7.42□□□□□ -1.22
CLSTN3-212ENST00000541770 RGS6P49758 472 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms