RNA–Protein interactions for RNA: ENST00000540931.1

CLSTN3-210, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-210ENST00000540931 OR10A2Q9H208 303 aa15.1■□□□□ 0.01
CLSTN3-210ENST00000540931 MS4A5Q9H3V2 200 aa15.1■□□□□ 0.01
CLSTN3-210ENST00000540931 PLK3Q9H4B4 646 aa15.1■□□□□ 0.01
CLSTN3-210ENST00000540931 NOP16Q9Y3C1 178 aaKnown RBP15.1■□□□□ 0.01
CLSTN3-210ENST00000540931 TACC2O95359 2948 aa15.1■□□□□ 0.01
CLSTN3-210ENST00000540931 ZFHX3Q15911 3703 aa15.09■□□□□ 0.01
CLSTN3-210ENST00000540931 A0A1W2PQL4 384 aaPredicted RBP15.09■□□□□ 0.01
CLSTN3-210ENST00000540931 METTL15A6NJ78 407 aa15.09■□□□□ 0.01
CLSTN3-210ENST00000540931 J3QRE1 110 aa15.09■□□□□ 0.01
CLSTN3-210ENST00000540931 PLAUP00749 431 aa15.09■□□□□ 0.01
CLSTN3-210ENST00000540931 IGHA1P01876 353 aa15.09■□□□□ 0.01
CLSTN3-210ENST00000540931 OR4A8P0C604 315 aa15.09■□□□□ 0.01
CLSTN3-210ENST00000540931 RAC2P15153 192 aa15.09■□□□□ 0.01
CLSTN3-210ENST00000540931 DNASE1P24855 282 aa15.09■□□□□ 0.01
CLSTN3-210ENST00000540931 CX3CR1P49238 355 aa15.09■□□□□ 0.01
CLSTN3-210ENST00000540931 KLF3P57682 345 aaPredicted RBP15.09■□□□□ 0.01
CLSTN3-210ENST00000540931 PSMA6P60900 246 aaKnown RBP15.09■□□□□ 0.01
CLSTN3-210ENST00000540931 SPOCK1Q08629 439 aa15.09■□□□□ 0.01
CLSTN3-210ENST00000540931 GALEQ14376 348 aa15.09■□□□□ 0.01
CLSTN3-210ENST00000540931 FAM209AQ5JX71 171 aa15.09■□□□□ 0.01
CLSTN3-210ENST00000540931 C6orf141Q5SZD1 244 aa15.09■□□□□ 0.01
CLSTN3-210ENST00000540931 PAMR1Q6UXH9 720 aa15.09■□□□□ 0.01
CLSTN3-210ENST00000540931 TMPRSS11AQ6ZMR5 421 aa15.09■□□□□ 0.01
CLSTN3-210ENST00000540931 CCDC54Q8NEL0 328 aa15.09■□□□□ 0.01
CLSTN3-210ENST00000540931 LILRB1Q8NHL6 650 aaPredicted RBP15.09■□□□□ 0.01
CLSTN3-210ENST00000540931 TMEM80Q96HE8 168 aa15.09■□□□□ 0.01
CLSTN3-210ENST00000540931 LURAP1Q96LR2 239 aa15.09■□□□□ 0.01
CLSTN3-210ENST00000540931 YTHDF1Q9BYJ9 559 aaKnown RBP15.09■□□□□ 0.01
CLSTN3-210ENST00000540931 DIMT1Q9UNQ2 313 aaKnown RBP15.09■□□□□ 0.01
CLSTN3-210ENST00000540931 LRP12Q9Y561 859 aa15.09■□□□□ 0.01
CLSTN3-210ENST00000540931 ITPR3Q14573 2671 aa15.09■□□□□ 0.01
CLSTN3-210ENST00000540931 PRR14LQ5THK1 2151 aa15.08■□□□□ 0.01
CLSTN3-210ENST00000540931 CADP27708 2225 aa15.08■□□□□ 0
CLSTN3-210ENST00000540931 DCHS2Q6V1P9 2916 aa15.08■□□□□ 0
CLSTN3-210ENST00000540931 TMEM269A0A1B0GVZ9 245 aa15.08■□□□□ 0
CLSTN3-210ENST00000540931 FAM20BO75063 409 aa15.08■□□□□ 0
CLSTN3-210ENST00000540931 DANCRP0C864 163 aa15.08■□□□□ 0
CLSTN3-210ENST00000540931 FAM157BP0CG42 384 aa15.08■□□□□ 0
CLSTN3-210ENST00000540931 THBS4P35443 961 aa15.08■□□□□ 0
CLSTN3-210ENST00000540931 DDOSTP39656 456 aa15.08■□□□□ 0
CLSTN3-210ENST00000540931 WNT5AP41221 380 aa15.08■□□□□ 0
CLSTN3-210ENST00000540931 ADIPOQQ15848 244 aa15.08■□□□□ 0
CLSTN3-210ENST00000540931 RBM48Q5RL73 367 aaKnown RBP15.08■□□□□ 0
CLSTN3-210ENST00000540931 OTPQ5XKR4 325 aa15.08■□□□□ 0
CLSTN3-210ENST00000540931 FBXW12Q6X9E4 464 aa15.08■□□□□ 0
CLSTN3-210ENST00000540931 STX19Q8N4C7 294 aa15.08■□□□□ 0
CLSTN3-210ENST00000540931 FTMTQ8N4E7 242 aa15.08■□□□□ 0
CLSTN3-210ENST00000540931 ZNF540Q8NDQ6 660 aa15.08■□□□□ 0
CLSTN3-210ENST00000540931 TRMT61AQ96FX7 289 aaKnown RBP15.08■□□□□ 0
CLSTN3-210ENST00000540931 CCL19Q99731 98 aa15.08■□□□□ 0
CLSTN3-210ENST00000540931 MED13LQ71F56 2210 aa15.07■□□□□ 0
CLSTN3-210ENST00000540931 IGLV3-9A0A075B6K5 115 aa15.07■□□□□ 0
CLSTN3-210ENST00000540931 PLSCR5A0PG75 271 aa15.07■□□□□ 0
CLSTN3-210ENST00000540931 MRPS14O60783 128 aaKnown RBP15.07■□□□□ 0
CLSTN3-210ENST00000540931 ATE1O95260 518 aa15.07■□□□□ 0
CLSTN3-210ENST00000540931 IGHV3-13P01766 116 aa15.07■□□□□ 0
CLSTN3-210ENST00000540931 ANXA2P07355 339 aaKnown RBP15.07■□□□□ 0
CLSTN3-210ENST00000540931 DBHP09172 617 aa15.07■□□□□ 0
CLSTN3-210ENST00000540931 ATP6V1B1P15313 513 aa15.07■□□□□ 0
CLSTN3-210ENST00000540931 PRKXP51817 358 aa15.07■□□□□ 0
CLSTN3-210ENST00000540931 RSPO1Q2MKA7 263 aaPredicted RBP15.07■□□□□ 0
CLSTN3-210ENST00000540931 CDONQ4KMG0 1287 aa15.07■□□□□ 0
CLSTN3-210ENST00000540931 VHLLQ6RSH7 139 aa15.07■□□□□ 0
CLSTN3-210ENST00000540931 LRRN1Q6UXK5 716 aa15.07■□□□□ 0
CLSTN3-210ENST00000540931 ZNF101Q8IZC7 436 aa15.07■□□□□ 0
CLSTN3-210ENST00000540931 PAQR4Q8N4S7 273 aaPredicted RBP15.07■□□□□ 0
CLSTN3-210ENST00000540931 YIPF7Q8N8F6 280 aa15.07■□□□□ 0
CLSTN3-210ENST00000540931 BPIFB6Q8NFQ5 453 aa15.07■□□□□ 0
CLSTN3-210ENST00000540931 OR52I1Q8NGK6 324 aa15.07■□□□□ 0
CLSTN3-210ENST00000540931 MARS2Q96GW9 593 aaKnown RBP15.07■□□□□ 0
CLSTN3-210ENST00000540931 DIRC2Q96SL1 478 aa15.07■□□□□ 0
CLSTN3-210ENST00000540931 SLC22A4Q9H015 551 aa15.07■□□□□ 0
CLSTN3-210ENST00000540931 AMBNQ9NP70 447 aa15.07■□□□□ 0
CLSTN3-210ENST00000540931 BEX4Q9NWD9 120 aaPredicted RBP15.07■□□□□ 0
CLSTN3-210ENST00000540931 PSORS1C1Q9UIG5 152 aa15.07■□□□□ 0
CLSTN3-210ENST00000540931 ST6GALNAC2Q9UJ37 374 aa15.07■□□□□ 0
CLSTN3-210ENST00000540931 CAB39Q9Y376 341 aaPredicted RBP15.07■□□□□ 0
CLSTN3-210ENST00000540931 SNX5Q9Y5X3 404 aa15.07■□□□□ 0
CLSTN3-210ENST00000540931 A0A0U1RQV5 110 aa15.06■□□□□ 0
CLSTN3-210ENST00000540931 PPOXP50336 477 aa15.06■□□□□ 0
CLSTN3-210ENST00000540931 DBPQ10586 325 aaPredicted RBP15.06■□□□□ 0
CLSTN3-210ENST00000540931 ST3GAL4Q11206 333 aa15.06■□□□□ 0
CLSTN3-210ENST00000540931 RNLSQ5VYX0 342 aa15.06■□□□□ 0
CLSTN3-210ENST00000540931 PGAP1Q75T13 922 aa15.06■□□□□ 0
CLSTN3-210ENST00000540931 SLC25A40Q8TBP6 338 aa15.06■□□□□ 0
CLSTN3-210ENST00000540931 KLF14Q8TD94 323 aaPredicted RBP15.06■□□□□ 0
CLSTN3-210ENST00000540931 SLC7A6Q92536 515 aa15.06■□□□□ 0
CLSTN3-210ENST00000540931 HAVCR1Q96D42 359 aa15.06■□□□□ 0
CLSTN3-210ENST00000540931 MBD6Q96DN6 1003 aa15.06■□□□□ 0
CLSTN3-210ENST00000540931 PGAM5Q96HS1 289 aa15.06■□□□□ 0
CLSTN3-210ENST00000540931 CNBD2Q96M20 576 aa15.06■□□□□ 0
CLSTN3-210ENST00000540931 TRAF4Q9BUZ4 470 aaPredicted RBP15.06■□□□□ 0
CLSTN3-210ENST00000540931 OR2J1Q9GZK6 312 aa15.06■□□□□ 0
CLSTN3-210ENST00000540931 COPS3Q9UNS2 423 aa15.06■□□□□ 0
CLSTN3-210ENST00000540931 STARD10Q9Y365 291 aa15.06■□□□□ 0
CLSTN3-210ENST00000540931 PCDHGB5Q9Y5G0 923 aa15.06■□□□□ 0
CLSTN3-210ENST00000540931 R4GMQ9 66 aa15.06■□□□□ 0
CLSTN3-210ENST00000540931 NF1P21359 2839 aa15.06■□□□□ 0
CLSTN3-210ENST00000540931 AKAP9Q99996 3911 aa15.05■□□□□ 0
CLSTN3-210ENST00000540931 LOC110117498-PIK3R3F6TDL0 507 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms