RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 MMP7P09237 267 aaPredicted RBP10.73□□□□□ -0.69
AP003559.1-201ENST00000540906 ABOP16442 354 aa10.73□□□□□ -0.69
AP003559.1-201ENST00000540906 AGTR1P30556 359 aa10.73□□□□□ -0.69
AP003559.1-201ENST00000540906 RFX2P48378 723 aa10.73□□□□□ -0.69
AP003559.1-201ENST00000540906 EFNB2P52799 333 aa10.73□□□□□ -0.69
AP003559.1-201ENST00000540906 PRSS12P56730 875 aa10.73□□□□□ -0.69
AP003559.1-201ENST00000540906 GRB2P62993 217 aaKnown RBP10.73□□□□□ -0.69
AP003559.1-201ENST00000540906 SNAI3Q3KNW1 292 aa10.73□□□□□ -0.69
AP003559.1-201ENST00000540906 DMRTC1Q5HYR2 192 aa10.73□□□□□ -0.69
AP003559.1-201ENST00000540906 FAM166AQ6J272 317 aa10.73□□□□□ -0.69
AP003559.1-201ENST00000540906 IGFL3Q6UXB1 125 aa10.73□□□□□ -0.69
AP003559.1-201ENST00000540906 RHOUQ7L0Q8 258 aa10.73□□□□□ -0.69
AP003559.1-201ENST00000540906 LYPD6Q86Y78 171 aa10.73□□□□□ -0.69
AP003559.1-201ENST00000540906 ZADH2Q8N4Q0 377 aa10.73□□□□□ -0.69
AP003559.1-201ENST00000540906 GDPD1Q8N9F7 314 aa10.73□□□□□ -0.69
AP003559.1-201ENST00000540906 FAM71F1Q96KD3 344 aaPredicted RBP10.73□□□□□ -0.69
AP003559.1-201ENST00000540906 NIPAL2Q9H841 368 aa10.73□□□□□ -0.69
AP003559.1-201ENST00000540906 RNF122Q9H9V4 155 aa10.73□□□□□ -0.69
AP003559.1-201ENST00000540906 SLC17A5Q9NRA2 495 aa10.73□□□□□ -0.69
AP003559.1-201ENST00000540906 FAIMQ9NVQ4 179 aa10.73□□□□□ -0.69
AP003559.1-201ENST00000540906 PAQR5Q9NXK6 330 aaPredicted RBP10.73□□□□□ -0.69
AP003559.1-201ENST00000540906 EMC3Q9P0I2 261 aa10.73□□□□□ -0.69
AP003559.1-201ENST00000540906 BSNQ9UPA5 3926 aa10.73□□□□□ -0.69
AP003559.1-201ENST00000540906 DOCK7Q96N67 2140 aa10.73□□□□□ -0.69
AP003559.1-201ENST00000540906 ANKRD11Q6UB99 2663 aaPredicted RBP10.73□□□□□ -0.69
AP003559.1-201ENST00000540906 ISPDA4D126 451 aa10.72□□□□□ -0.69
AP003559.1-201ENST00000540906 C1QTNF9BB2RNN3 333 aa10.72□□□□□ -0.69
AP003559.1-201ENST00000540906 SGCEO43556 437 aa10.72□□□□□ -0.69
AP003559.1-201ENST00000540906 C1QTNF9P0C862 333 aa10.72□□□□□ -0.69
AP003559.1-201ENST00000540906 RIN1Q13671 783 aa10.72□□□□□ -0.69
AP003559.1-201ENST00000540906 RAB35Q15286 201 aa10.72□□□□□ -0.69
AP003559.1-201ENST00000540906 RNPS1Q15287 305 aaKnown RBP10.72□□□□□ -0.69
AP003559.1-201ENST00000540906 KRTAP27-1Q3LI81 207 aa10.72□□□□□ -0.69
AP003559.1-201ENST00000540906 RNASE12Q5GAN4 147 aaKnown RBP10.72□□□□□ -0.69
AP003559.1-201ENST00000540906 METAP1DQ6UB28 335 aaPredicted RBP10.72□□□□□ -0.69
AP003559.1-201ENST00000540906 Q6ZS92 163 aa10.72□□□□□ -0.69
AP003559.1-201ENST00000540906 CHMP1BQ7LBR1 199 aa10.72□□□□□ -0.69
AP003559.1-201ENST00000540906 ABHD12BQ7Z5M8 362 aaPredicted RBP10.72□□□□□ -0.69
AP003559.1-201ENST00000540906 OR51D1Q8NGF3 324 aa10.72□□□□□ -0.69
AP003559.1-201ENST00000540906 GCDHQ92947 438 aaPredicted RBP10.72□□□□□ -0.69
AP003559.1-201ENST00000540906 SLC25A28Q96A46 364 aa10.72□□□□□ -0.69
AP003559.1-201ENST00000540906 PGAM5Q96HS1 289 aa10.72□□□□□ -0.69
AP003559.1-201ENST00000540906 NEDD4LQ96PU5 975 aa10.72□□□□□ -0.69
AP003559.1-201ENST00000540906 OR2H1Q9GZK4 316 aa10.72□□□□□ -0.69
AP003559.1-201ENST00000540906 ADAM30Q9UKF2 790 aa10.72□□□□□ -0.69
AP003559.1-201ENST00000540906 LHX6Q9UPM6 363 aa10.72□□□□□ -0.69
AP003559.1-201ENST00000540906 FOXJ3Q9UPW0 622 aa10.72□□□□□ -0.69
AP003559.1-201ENST00000540906 A0A1B0GVI7 797 aa10.72□□□□□ -0.69
AP003559.1-201ENST00000540906 OR6C6A6NF89 314 aa10.72□□□□□ -0.69
AP003559.1-201ENST00000540906 RPL36A-HNRNPH2H7BZ11 118 aa10.72□□□□□ -0.69
AP003559.1-201ENST00000540906 M0R135 149 aa10.72□□□□□ -0.69
AP003559.1-201ENST00000540906 AQP7O14520 342 aa10.72□□□□□ -0.69
AP003559.1-201ENST00000540906 KRT33AO76009 404 aa10.72□□□□□ -0.69
AP003559.1-201ENST00000540906 APOA1P02647 267 aa10.72□□□□□ -0.69
AP003559.1-201ENST00000540906 CD37P11049 281 aa10.72□□□□□ -0.69
AP003559.1-201ENST00000540906 PTHLHP12272 177 aa10.72□□□□□ -0.69
AP003559.1-201ENST00000540906 CCL1P22362 96 aa10.72□□□□□ -0.69
AP003559.1-201ENST00000540906 SLC6A9P48067 706 aa10.72□□□□□ -0.69
AP003559.1-201ENST00000540906 FAPQ12884 760 aa10.72□□□□□ -0.69
AP003559.1-201ENST00000540906 PLEKHN1Q494U1 663 aaPredicted RBP10.72□□□□□ -0.69
AP003559.1-201ENST00000540906 MTFR2Q6P444 385 aa10.72□□□□□ -0.69
AP003559.1-201ENST00000540906 SLC16A14Q7RTX9 510 aa10.72□□□□□ -0.69
AP003559.1-201ENST00000540906 LUZP2Q86TE4 346 aa10.72□□□□□ -0.69
AP003559.1-201ENST00000540906 MCEMP1Q8IX19 187 aa10.72□□□□□ -0.69
AP003559.1-201ENST00000540906 GCNT2Q8N0V5 402 aa10.72□□□□□ -0.69
AP003559.1-201ENST00000540906 Q8N402 240 aa10.72□□□□□ -0.69
AP003559.1-201ENST00000540906 CPEB3Q8NE35 698 aaKnown RBP10.72□□□□□ -0.69
AP003559.1-201ENST00000540906 OR14K1Q8NGZ2 314 aa10.72□□□□□ -0.69
AP003559.1-201ENST00000540906 OR1F12Q8NHA8 337 aa10.72□□□□□ -0.69
AP003559.1-201ENST00000540906 APH1AQ96BI3 265 aa10.72□□□□□ -0.69
AP003559.1-201ENST00000540906 ZNF799Q96GE5 643 aa10.72□□□□□ -0.69
AP003559.1-201ENST00000540906 WACQ9BTA9 647 aa10.72□□□□□ -0.69
AP003559.1-201ENST00000540906 MOB1AQ9H8S9 216 aa10.72□□□□□ -0.69
AP003559.1-201ENST00000540906 PLSCR2Q9NRY7 297 aa10.72□□□□□ -0.69
AP003559.1-201ENST00000540906 STEAP1Q9UHE8 339 aa10.72□□□□□ -0.69
AP003559.1-201ENST00000540906 CACNA1AO00555 2505 aa10.71□□□□□ -0.69
AP003559.1-201ENST00000540906 HLA-HP01893 362 aa10.71□□□□□ -0.69
AP003559.1-201ENST00000540906 CD2P06729 351 aa10.71□□□□□ -0.69
AP003559.1-201ENST00000540906 DDOSTP39656 456 aa10.71□□□□□ -0.69
AP003559.1-201ENST00000540906 UBE2NLQ5JXB2 153 aa10.71□□□□□ -0.69
AP003559.1-201ENST00000540906 ZNF529Q6P280 563 aa10.71□□□□□ -0.69
AP003559.1-201ENST00000540906 COMMD2Q86X83 199 aa10.71□□□□□ -0.69
AP003559.1-201ENST00000540906 OR5AS1Q8N127 324 aa10.71□□□□□ -0.69
AP003559.1-201ENST00000540906 UBE2J2Q8N2K1 259 aa10.71□□□□□ -0.69
AP003559.1-201ENST00000540906 OR52N4Q8NGI2 321 aa10.71□□□□□ -0.69
AP003559.1-201ENST00000540906 OR13C9Q8NGT0 318 aa10.71□□□□□ -0.69
AP003559.1-201ENST00000540906 OR2AE1Q8NHA4 323 aa10.71□□□□□ -0.69
AP003559.1-201ENST00000540906 SYNPRQ8TBG9 265 aa10.71□□□□□ -0.69
AP003559.1-201ENST00000540906 TRIM63Q969Q1 353 aa10.71□□□□□ -0.69
AP003559.1-201ENST00000540906 TRIB1Q96RU8 372 aa10.71□□□□□ -0.69
AP003559.1-201ENST00000540906 C11orf54Q9H0W9 315 aaPredicted RBP10.71□□□□□ -0.69
AP003559.1-201ENST00000540906 PARPBPQ9NWS1 579 aa10.71□□□□□ -0.69
AP003559.1-201ENST00000540906 B3GNT2Q9NY97 397 aa10.71□□□□□ -0.69
AP003559.1-201ENST00000540906 DMXL2Q8TDJ6 3036 aa10.71□□□□□ -0.69
AP003559.1-201ENST00000540906 PRRC2CQ9Y520 2896 aaKnown RBP10.71□□□□□ -0.7
AP003559.1-201ENST00000540906 ZNF587BE7ETH6 402 aa10.7□□□□□ -0.7
AP003559.1-201ENST00000540906 CALCBP10092 127 aa10.7□□□□□ -0.7
AP003559.1-201ENST00000540906 CFPP27918 469 aa10.7□□□□□ -0.7
AP003559.1-201ENST00000540906 GNALP38405 381 aa10.7□□□□□ -0.7
AP003559.1-201ENST00000540906 HTR5AP47898 357 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms