RNA–Protein interactions for RNA: ENST00000540804.5

MSRB3-209, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 2 BASIC

Gene MSRB3, Length 884 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-209ENST00000540804 KLBQ86Z14 1044 aa12.12□□□□□ -0.47
MSRB3-209ENST00000540804 OR9Q1Q8NGQ5 310 aa12.12□□□□□ -0.47
MSRB3-209ENST00000540804 OR2AJ1Q8NGZ0 328 aa12.12□□□□□ -0.47
MSRB3-209ENST00000540804 C1orf147Q96MC9 270 aaPredicted RBP12.12□□□□□ -0.47
MSRB3-209ENST00000540804 DDOQ99489 341 aa12.12□□□□□ -0.47
MSRB3-209ENST00000540804 ATF6BQ99941 703 aa12.12□□□□□ -0.47
MSRB3-209ENST00000540804 TMEM246Q9BRR3 403 aa12.12□□□□□ -0.47
MSRB3-209ENST00000540804 NSRP1Q9H0G5 558 aaKnown RBP12.12□□□□□ -0.47
MSRB3-209ENST00000540804 TMEM100Q9NV29 134 aa12.12□□□□□ -0.47
MSRB3-209ENST00000540804 VNN3Q9NY84 501 aa12.12□□□□□ -0.47
MSRB3-209ENST00000540804 POLR3KQ9Y2Y1 108 aaPredicted RBP12.12□□□□□ -0.47
MSRB3-209ENST00000540804 LYVE1Q9Y5Y7 322 aa12.12□□□□□ -0.47
MSRB3-209ENST00000540804 A8MXK9 166 aa12.11□□□□□ -0.47
MSRB3-209ENST00000540804 GASTP01350 101 aa12.11□□□□□ -0.47
MSRB3-209ENST00000540804 IGHV4-38-2P0DP08 117 aa12.11□□□□□ -0.47
MSRB3-209ENST00000540804 RPS2P15880 293 aaKnown RBP12.11□□□□□ -0.47
MSRB3-209ENST00000540804 FPR2P25090 351 aa12.11□□□□□ -0.47
MSRB3-209ENST00000540804 SRP9P49458 86 aaKnown RBP12.11□□□□□ -0.47
MSRB3-209ENST00000540804 COMPP49747 757 aaPredicted RBP12.11□□□□□ -0.47
MSRB3-209ENST00000540804 MXRA7P84157 204 aa12.11□□□□□ -0.47
MSRB3-209ENST00000540804 PAX2Q02962 417 aa12.11□□□□□ -0.47
MSRB3-209ENST00000540804 MPPED2Q15777 294 aa12.11□□□□□ -0.47
MSRB3-209ENST00000540804 SNAI3Q3KNW1 292 aa12.11□□□□□ -0.47
MSRB3-209ENST00000540804 SLC36A3Q495N2 470 aa12.11□□□□□ -0.47
MSRB3-209ENST00000540804 ESCO2Q56NI9 601 aa12.11□□□□□ -0.47
MSRB3-209ENST00000540804 ZNF362Q5T0B9 420 aaPredicted RBP12.11□□□□□ -0.47
MSRB3-209ENST00000540804 SLC27A4Q6P1M0 643 aa12.11□□□□□ -0.47
MSRB3-209ENST00000540804 PGM2L1Q6PCE3 622 aa12.11□□□□□ -0.47
MSRB3-209ENST00000540804 C3orf56Q8N813 242 aa12.11□□□□□ -0.47
MSRB3-209ENST00000540804 SLC37A3Q8NCC5 494 aa12.11□□□□□ -0.47
MSRB3-209ENST00000540804 OR4C15Q8NGM1 316 aa12.11□□□□□ -0.47
MSRB3-209ENST00000540804 OR2AE1Q8NHA4 323 aa12.11□□□□□ -0.47
MSRB3-209ENST00000540804 POP5Q969H6 163 aaKnown RBP12.11□□□□□ -0.47
MSRB3-209ENST00000540804 JMJD8Q96S16 334 aa12.11□□□□□ -0.47
MSRB3-209ENST00000540804 RBM4Q9BWF3 364 aaKnown RBP12.11□□□□□ -0.47
MSRB3-209ENST00000540804 HCAR1Q9BXC0 346 aa12.11□□□□□ -0.47
MSRB3-209ENST00000540804 UFSP2Q9NUQ7 469 aa12.11□□□□□ -0.47
MSRB3-209ENST00000540804 NUP50Q9UKX7 468 aa12.11□□□□□ -0.47
MSRB3-209ENST00000540804 DYSFO75923 2080 aa12.1□□□□□ -0.47
MSRB3-209ENST00000540804 A0A1B0GWJ7 208 aa12.1□□□□□ -0.47
MSRB3-209ENST00000540804 TNFRSF11BO00300 401 aa12.1□□□□□ -0.47
MSRB3-209ENST00000540804 BHLHE40O14503 412 aa12.1□□□□□ -0.47
MSRB3-209ENST00000540804 FAM20BO75063 409 aa12.1□□□□□ -0.47
MSRB3-209ENST00000540804 GYPBP06028 91 aa12.1□□□□□ -0.47
MSRB3-209ENST00000540804 CLUP10909 449 aa12.1□□□□□ -0.47
MSRB3-209ENST00000540804 CA6P23280 308 aa12.1□□□□□ -0.47
MSRB3-209ENST00000540804 PAX8Q06710 450 aa12.1□□□□□ -0.47
MSRB3-209ENST00000540804 TUSC1Q2TAM9 212 aa12.1□□□□□ -0.47
MSRB3-209ENST00000540804 AWAT1Q58HT5 328 aa12.1□□□□□ -0.47
MSRB3-209ENST00000540804 PIGWQ7Z7B1 504 aa12.1□□□□□ -0.47
MSRB3-209ENST00000540804 MUC20Q8N307 709 aaPredicted RBP12.1□□□□□ -0.47
MSRB3-209ENST00000540804 PROKR2Q8NFJ6 384 aa12.1□□□□□ -0.47
MSRB3-209ENST00000540804 OR4Q3Q8NH05 313 aa12.1□□□□□ -0.47
MSRB3-209ENST00000540804 MRI1Q9BV20 369 aa12.1□□□□□ -0.47
MSRB3-209ENST00000540804 SSBP3Q9BWW4 388 aaPredicted RBP12.1□□□□□ -0.47
MSRB3-209ENST00000540804 OR5V1Q9UGF6 321 aa12.1□□□□□ -0.47
MSRB3-209ENST00000540804 ARL2BPQ9Y2Y0 163 aa12.1□□□□□ -0.47
MSRB3-209ENST00000540804 N6AMT1Q9Y5N5 214 aa12.1□□□□□ -0.47
MSRB3-209ENST00000540804 CDH10Q9Y6N8 788 aa12.1□□□□□ -0.47
MSRB3-209ENST00000540804 NBEAL1Q6ZS30 2694 aa12.1□□□□□ -0.47
MSRB3-209ENST00000540804 MDFIC2A0A1B0GVS7 189 aa12.09□□□□□ -0.47
MSRB3-209ENST00000540804 TCRBV5S2A0A599 114 aa12.09□□□□□ -0.47
MSRB3-209ENST00000540804 DNAJC9-AS1A6NH13 148 aa12.09□□□□□ -0.47
MSRB3-209ENST00000540804 M0R135 149 aa12.09□□□□□ -0.47
MSRB3-209ENST00000540804 ATP8B1O43520 1251 aa12.09□□□□□ -0.47
MSRB3-209ENST00000540804 IDH3BO43837 385 aa12.09□□□□□ -0.47
MSRB3-209ENST00000540804 SOX14O95416 240 aa12.09□□□□□ -0.47
MSRB3-209ENST00000540804 SLC2A1P11166 492 aa12.09□□□□□ -0.47
MSRB3-209ENST00000540804 ZNF823P16415 610 aa12.09□□□□□ -0.47
MSRB3-209ENST00000540804 EGR1P18146 543 aa12.09□□□□□ -0.47
MSRB3-209ENST00000540804 IFNGR2P38484 337 aa12.09□□□□□ -0.47
MSRB3-209ENST00000540804 TPTEP56180 551 aa12.09□□□□□ -0.47
MSRB3-209ENST00000540804 GNB2P62879 340 aa12.09□□□□□ -0.47
MSRB3-209ENST00000540804 ZNF92Q03936 586 aa12.09□□□□□ -0.47
MSRB3-209ENST00000540804 ZNF404Q494X3 552 aa12.09□□□□□ -0.47
MSRB3-209ENST00000540804 ZNF770Q6IQ21 691 aaPredicted RBP12.09□□□□□ -0.47
MSRB3-209ENST00000540804 C16orf89Q6UX73 402 aa12.09□□□□□ -0.47
MSRB3-209ENST00000540804 SPATC1Q76KD6 591 aa12.09□□□□□ -0.47
MSRB3-209ENST00000540804 BOLLQ8N9W6 283 aaKnown RBP12.09□□□□□ -0.47
MSRB3-209ENST00000540804 ZNF511Q8NB15 262 aa12.09□□□□□ -0.47
MSRB3-209ENST00000540804 ZNF799Q96GE5 643 aa12.09□□□□□ -0.47
MSRB3-209ENST00000540804 DDX28Q9NUL7 540 aaKnown RBP12.09□□□□□ -0.47
MSRB3-209ENST00000540804 ARMC1Q9NVT9 282 aa12.09□□□□□ -0.47
MSRB3-209ENST00000540804 LRCH1Q9Y2L9 728 aa12.09□□□□□ -0.47
MSRB3-209ENST00000540804 IGHV2-70DA0A0C4DH43 119 aa12.08□□□□□ -0.48
MSRB3-209ENST00000540804 CCNB2O95067 398 aa12.08□□□□□ -0.48
MSRB3-209ENST00000540804 PRKXP51817 358 aa12.08□□□□□ -0.48
MSRB3-209ENST00000540804 HMGA2P52926 109 aa12.08□□□□□ -0.48
MSRB3-209ENST00000540804 RAD23AP54725 363 aa12.08□□□□□ -0.48
MSRB3-209ENST00000540804 ECH1Q13011 328 aa12.08□□□□□ -0.48
MSRB3-209ENST00000540804 MALLQ13021 153 aa12.08□□□□□ -0.48
MSRB3-209ENST00000540804 BAMBIQ13145 260 aa12.08□□□□□ -0.48
MSRB3-209ENST00000540804 CRMP1Q14194 572 aa12.08□□□□□ -0.48
MSRB3-209ENST00000540804 GLYATL3Q5SZD4 288 aa12.08□□□□□ -0.48
MSRB3-209ENST00000540804 SFRP4Q6FHJ7 346 aaPredicted RBP12.08□□□□□ -0.48
MSRB3-209ENST00000540804 PGAP1Q75T13 922 aa12.08□□□□□ -0.48
MSRB3-209ENST00000540804 DOK3Q7L591 496 aa12.08□□□□□ -0.48
MSRB3-209ENST00000540804 MRPL21Q7Z2W9 205 aaKnown RBP12.08□□□□□ -0.48
MSRB3-209ENST00000540804 DCXRQ7Z4W1 244 aa12.08□□□□□ -0.48
MSRB3-209ENST00000540804 PARP8Q8N3A8 854 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms