RNA–Protein interactions for RNA: ENST00000540537.5

CHFR-217, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 913 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-217ENST00000540537 GK2Q14410 553 aaPredicted RBP17.64■□□□□ 0.41
CHFR-217ENST00000540537 MICAQ29983 383 aa17.64■□□□□ 0.41
CHFR-217ENST00000540537 USP43Q70EL4 1123 aa17.64■□□□□ 0.41
CHFR-217ENST00000540537 MUC20Q8N307 709 aaPredicted RBP17.64■□□□□ 0.41
CHFR-217ENST00000540537 OR10S1Q8NGN2 331 aa17.64■□□□□ 0.41
CHFR-217ENST00000540537 NANPQ8TBE9 248 aa17.64■□□□□ 0.41
CHFR-217ENST00000540537 TSSK6Q9BXA6 273 aa17.64■□□□□ 0.41
CHFR-217ENST00000540537 C7orf69Q9H7B7 122 aa17.64■□□□□ 0.41
CHFR-217ENST00000540537 WDR76Q9H967 626 aa17.64■□□□□ 0.41
CHFR-217ENST00000540537 DDX28Q9NUL7 540 aaKnown RBP17.64■□□□□ 0.41
CHFR-217ENST00000540537 TMEM100Q9NV29 134 aa17.64■□□□□ 0.41
CHFR-217ENST00000540537 SAMHD1Q9Y3Z3 626 aaKnown RBP17.64■□□□□ 0.41
CHFR-217ENST00000540537 TVP23AA6NH52 213 aa17.63■□□□□ 0.41
CHFR-217ENST00000540537 H0YL77 283 aa17.63■□□□□ 0.41
CHFR-217ENST00000540537 M0R135 149 aa17.63■□□□□ 0.41
CHFR-217ENST00000540537 T-ENOLP0DO92 83 aa17.63■□□□□ 0.41
CHFR-217ENST00000540537 GK3PQ14409 553 aa17.63■□□□□ 0.41
CHFR-217ENST00000540537 BHLHE23Q8NDY6 225 aa17.63■□□□□ 0.41
CHFR-217ENST00000540537 OR2T33Q8NG76 320 aa17.63■□□□□ 0.41
CHFR-217ENST00000540537 ZNRF4Q8WWF5 429 aa17.63■□□□□ 0.41
CHFR-217ENST00000540537 SPTSSAQ969W0 71 aa17.63■□□□□ 0.41
CHFR-217ENST00000540537 ASB9Q96DX5 294 aa17.63■□□□□ 0.41
CHFR-217ENST00000540537 ZNF799Q96GE5 643 aa17.63■□□□□ 0.41
CHFR-217ENST00000540537 RBM4Q9BWF3 364 aaKnown RBP17.63■□□□□ 0.41
CHFR-217ENST00000540537 OPN4Q9UHM6 478 aa17.63■□□□□ 0.41
CHFR-217ENST00000540537 A8MXK9 166 aa17.62■□□□□ 0.41
CHFR-217ENST00000540537 F5H5P2 479 aa17.62■□□□□ 0.41
CHFR-217ENST00000540537 ADRA2CP18825 462 aa17.62■□□□□ 0.41
CHFR-217ENST00000540537 CPT2P23786 658 aa17.62■□□□□ 0.41
CHFR-217ENST00000540537 OTX1P32242 354 aaPredicted RBP17.62■□□□□ 0.41
CHFR-217ENST00000540537 SLC6A9P48067 706 aa17.62■□□□□ 0.41
CHFR-217ENST00000540537 SLC25A1P53007 311 aa17.62■□□□□ 0.41
CHFR-217ENST00000540537 ZNF181Q2M3W8 571 aa17.62■□□□□ 0.41
CHFR-217ENST00000540537 PGAP1Q75T13 922 aa17.62■□□□□ 0.41
CHFR-217ENST00000540537 NAA40Q86UY6 237 aa17.62■□□□□ 0.41
CHFR-217ENST00000540537 OR9Q1Q8NGQ5 310 aa17.62■□□□□ 0.41
CHFR-217ENST00000540537 ZNF420Q8TAQ5 688 aaPredicted RBP17.62■□□□□ 0.41
CHFR-217ENST00000540537 NMNAT2Q9BZQ4 307 aa17.62■□□□□ 0.41
CHFR-217ENST00000540537 C1orf21Q9H246 121 aa17.62■□□□□ 0.41
CHFR-217ENST00000540537 COMMD3-BMI1R4GMX3 469 aa17.62■□□□□ 0.41
CHFR-217ENST00000540537 U3KQV3 271 aa17.62■□□□□ 0.41
CHFR-217ENST00000540537 SOX14O95416 240 aa17.61■□□□□ 0.41
CHFR-217ENST00000540537 FSTL3O95633 263 aa17.61■□□□□ 0.41
CHFR-217ENST00000540537 FSHBP01225 129 aa17.61■□□□□ 0.41
CHFR-217ENST00000540537 RAP2AP10114 183 aa17.61■□□□□ 0.41
CHFR-217ENST00000540537 FMO3P31513 532 aa17.61■□□□□ 0.41
CHFR-217ENST00000540537 RPS27P42677 84 aaKnown RBP17.61■□□□□ 0.41
CHFR-217ENST00000540537 GATA4P43694 442 aa17.61■□□□□ 0.41
CHFR-217ENST00000540537 HILS1P60008 231 aa17.61■□□□□ 0.41
CHFR-217ENST00000540537 CRMP1Q14194 572 aa17.61■□□□□ 0.41
CHFR-217ENST00000540537 PCK2Q16822 640 aa17.61■□□□□ 0.41
CHFR-217ENST00000540537 LYPD4Q6UWN0 246 aa17.61■□□□□ 0.41
CHFR-217ENST00000540537 CD300LDQ6UXZ3 194 aa17.61■□□□□ 0.41
CHFR-217ENST00000540537 MOGAT3Q86VF5 341 aa17.61■□□□□ 0.41
CHFR-217ENST00000540537 CELF2-AS1Q8N7Q2 184 aa17.61■□□□□ 0.41
CHFR-217ENST00000540537 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17.61■□□□□ 0.41
CHFR-217ENST00000540537 OR51L1Q8NGJ5 315 aa17.61■□□□□ 0.41
CHFR-217ENST00000540537 OR4Q3Q8NH05 313 aa17.61■□□□□ 0.41
CHFR-217ENST00000540537 SLCO4A1Q96BD0 722 aa17.61■□□□□ 0.41
CHFR-217ENST00000540537 LRGUKQ96M69 825 aa17.61■□□□□ 0.41
CHFR-217ENST00000540537 ARMC1Q9NVT9 282 aa17.61■□□□□ 0.41
CHFR-217ENST00000540537 DOCK11Q5JSL3 2073 aa17.6■□□□□ 0.41
CHFR-217ENST00000540537 LRRC30A6NM36 301 aa17.6■□□□□ 0.41
CHFR-217ENST00000540537 CEACAM18A8MTB9 384 aa17.6■□□□□ 0.41
CHFR-217ENST00000540537 IFNGP01579 166 aa17.6■□□□□ 0.41
CHFR-217ENST00000540537 PSKH1P11801 424 aa17.6■□□□□ 0.41
CHFR-217ENST00000540537 ENTPD1P49961 510 aa17.6■□□□□ 0.41
CHFR-217ENST00000540537 SEC61A1P61619 476 aaKnown RBP17.6■□□□□ 0.41
CHFR-217ENST00000540537 ESCO2Q56NI9 601 aa17.6■□□□□ 0.41
CHFR-217ENST00000540537 MRPL21Q7Z2W9 205 aaKnown RBP17.6■□□□□ 0.41
CHFR-217ENST00000540537 DCXRQ7Z4W1 244 aa17.6■□□□□ 0.41
CHFR-217ENST00000540537 C1orf87Q8N0U7 546 aa17.6■□□□□ 0.41
CHFR-217ENST00000540537 DEFB108BQ8NET1 73 aa17.6■□□□□ 0.41
CHFR-217ENST00000540537 OR10G2Q8NGC3 310 aa17.6■□□□□ 0.41
CHFR-217ENST00000540537 CCDC124Q96CT7 223 aaKnown RBP17.6■□□□□ 0.41
CHFR-217ENST00000540537 JMJD8Q96S16 334 aa17.6■□□□□ 0.41
CHFR-217ENST00000540537 SUCNR1Q9BXA5 334 aa17.6■□□□□ 0.41
CHFR-217ENST00000540537 MMP26Q9NRE1 261 aa17.6■□□□□ 0.41
CHFR-217ENST00000540537 TAS2R1Q9NYW7 299 aa17.6■□□□□ 0.41
CHFR-217ENST00000540537 LRCH1Q9Y2L9 728 aa17.6■□□□□ 0.41
CHFR-217ENST00000540537 TRAPPC2LH3BP13 241 aa17.59■□□□□ 0.41
CHFR-217ENST00000540537 CYB5R3P00387 301 aaPredicted RBP17.59■□□□□ 0.41
CHFR-217ENST00000540537 HLA-DPB1P04440 258 aa17.59■□□□□ 0.41
CHFR-217ENST00000540537 GYPBP06028 91 aa17.59■□□□□ 0.41
CHFR-217ENST00000540537 ZNF12P17014 697 aa17.59■□□□□ 0.41
CHFR-217ENST00000540537 SPI1P17947 270 aa17.59■□□□□ 0.41
CHFR-217ENST00000540537 CD200P41217 278 aa17.59■□□□□ 0.41
CHFR-217ENST00000540537 BLVRAP53004 296 aa17.59■□□□□ 0.41
CHFR-217ENST00000540537 PRSS12P56730 875 aa17.59■□□□□ 0.41
CHFR-217ENST00000540537 ZNF154Q13106 437 aa17.59■□□□□ 0.41
CHFR-217ENST00000540537 TEX30Q5JUR7 227 aa17.59■□□□□ 0.41
CHFR-217ENST00000540537 DRAM2Q6UX65 266 aa17.59■□□□□ 0.41
CHFR-217ENST00000540537 ZNF511Q8NB15 262 aa17.59■□□□□ 0.41
CHFR-217ENST00000540537 SPRYD4Q8WW59 207 aaPredicted RBP17.59■□□□□ 0.41
CHFR-217ENST00000540537 ERGIC1Q969X5 290 aa17.59■□□□□ 0.41
CHFR-217ENST00000540537 CLPTM1LQ96KA5 538 aa17.59■□□□□ 0.41
CHFR-217ENST00000540537 COPS4Q9BT78 406 aa17.59■□□□□ 0.41
CHFR-217ENST00000540537 SLC22A4Q9H015 551 aa17.59■□□□□ 0.41
CHFR-217ENST00000540537 TMEM165Q9HC07 324 aa17.59■□□□□ 0.41
CHFR-217ENST00000540537 NOP16Q9Y3C1 178 aaKnown RBP17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms