RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 RAG2P55895 527 aa9.99□□□□□ -0.81
CBX3P4-202ENST00000540428 MALLQ13021 153 aa9.99□□□□□ -0.81
CBX3P4-202ENST00000540428 GK2Q14410 553 aaPredicted RBP9.99□□□□□ -0.81
CBX3P4-202ENST00000540428 KCNJ8Q15842 424 aa9.99□□□□□ -0.81
CBX3P4-202ENST00000540428 MEP1BQ16820 701 aa9.99□□□□□ -0.81
CBX3P4-202ENST00000540428 RSPO1Q2MKA7 263 aaPredicted RBP9.99□□□□□ -0.81
CBX3P4-202ENST00000540428 SLC36A3Q495N2 470 aa9.99□□□□□ -0.81
CBX3P4-202ENST00000540428 CLEC12AQ5QGZ9 265 aa9.99□□□□□ -0.81
CBX3P4-202ENST00000540428 FAM201AQ5SY85 155 aa9.99□□□□□ -0.81
CBX3P4-202ENST00000540428 SLC18B1Q6NT16 456 aa9.99□□□□□ -0.81
CBX3P4-202ENST00000540428 C8orf82Q6P1X6 216 aaPredicted RBP9.99□□□□□ -0.81
CBX3P4-202ENST00000540428 SMARCD3Q6STE5 483 aa9.99□□□□□ -0.81
CBX3P4-202ENST00000540428 LYPD2Q6UXB3 125 aa9.99□□□□□ -0.81
CBX3P4-202ENST00000540428 BRD3OSQ6XYD6 125 aa9.99□□□□□ -0.81
CBX3P4-202ENST00000540428 C17orf107Q6ZR85 190 aa9.99□□□□□ -0.81
CBX3P4-202ENST00000540428 PLPP7Q8NBV4 271 aa9.99□□□□□ -0.81
CBX3P4-202ENST00000540428 SLC26A10Q8NG04 563 aa9.99□□□□□ -0.81
CBX3P4-202ENST00000540428 TAF15Q92804 592 aaKnown RBP eCLIP9.99□□□□□ -0.81
CBX3P4-202ENST00000540428 FAM162AQ96A26 154 aa9.99□□□□□ -0.81
CBX3P4-202ENST00000540428 ATF6BQ99941 703 aa9.99□□□□□ -0.81
CBX3P4-202ENST00000540428 CDADC1Q9BWV3 514 aa9.99□□□□□ -0.81
CBX3P4-202ENST00000540428 WDR76Q9H967 626 aa9.99□□□□□ -0.81
CBX3P4-202ENST00000540428 NDUFAF4Q9P032 175 aa9.99□□□□□ -0.81
CBX3P4-202ENST00000540428 KIF17Q9P2E2 1029 aa9.99□□□□□ -0.81
CBX3P4-202ENST00000540428 B9D1Q9UPM9 204 aa9.99□□□□□ -0.81
CBX3P4-202ENST00000540428 POMT1Q9Y6A1 747 aa9.99□□□□□ -0.81
CBX3P4-202ENST00000540428 IGHV3-64DA0A0J9YX35 117 aa9.98□□□□□ -0.81
CBX3P4-202ENST00000540428 CLPSL1A2RUU4 121 aa9.98□□□□□ -0.81
CBX3P4-202ENST00000540428 UNC119BA6NIH7 251 aa9.98□□□□□ -0.81
CBX3P4-202ENST00000540428 ZNF879B4DU55 563 aa9.98□□□□□ -0.81
CBX3P4-202ENST00000540428 C22orf46C9J442 243 aa9.98□□□□□ -0.81
CBX3P4-202ENST00000540428 FAM20BO75063 409 aa9.98□□□□□ -0.81
CBX3P4-202ENST00000540428 PTBP3O95758 552 aaKnown RBP9.98□□□□□ -0.81
CBX3P4-202ENST00000540428 RENP00797 406 aa9.98□□□□□ -0.81
CBX3P4-202ENST00000540428 OMGP23515 440 aa9.98□□□□□ -0.81
CBX3P4-202ENST00000540428 CFHR2P36980 270 aa9.98□□□□□ -0.81
CBX3P4-202ENST00000540428 CENPAP49450 140 aa9.98□□□□□ -0.81
CBX3P4-202ENST00000540428 C11orf91Q3C1V1 193 aa9.98□□□□□ -0.81
CBX3P4-202ENST00000540428 MIDNQ504T8 468 aa9.98□□□□□ -0.81
CBX3P4-202ENST00000540428 FGD3Q5JSP0 725 aa9.98□□□□□ -0.81
CBX3P4-202ENST00000540428 OLFML2AQ68BL7 652 aa9.98□□□□□ -0.81
CBX3P4-202ENST00000540428 CORO6Q6QEF8 472 aa9.98□□□□□ -0.81
CBX3P4-202ENST00000540428 FIP1L1Q6UN15 594 aaKnown RBP9.98□□□□□ -0.81
CBX3P4-202ENST00000540428 HACD2Q6Y1H2 254 aa9.98□□□□□ -0.81
CBX3P4-202ENST00000540428 PGAP1Q75T13 922 aa9.98□□□□□ -0.81
CBX3P4-202ENST00000540428 OR6V1Q8N148 313 aa9.98□□□□□ -0.81
CBX3P4-202ENST00000540428 DHRS1Q96LJ7 313 aa9.98□□□□□ -0.81
CBX3P4-202ENST00000540428 TSSK2Q96PF2 358 aa9.98□□□□□ -0.81
CBX3P4-202ENST00000540428 ERMAPQ96PL5 475 aaPredicted RBP9.98□□□□□ -0.81
CBX3P4-202ENST00000540428 PITX2Q99697 317 aa9.98□□□□□ -0.81
CBX3P4-202ENST00000540428 FN3KRPQ9HA64 309 aa9.98□□□□□ -0.81
CBX3P4-202ENST00000540428 TRIM36Q9NQ86 728 aa9.98□□□□□ -0.81
CBX3P4-202ENST00000540428 ARGLU1Q9NWB6 273 aaPredicted RBP9.98□□□□□ -0.81
CBX3P4-202ENST00000540428 C1RLQ9NZP8 487 aa9.98□□□□□ -0.81
CBX3P4-202ENST00000540428 ARMCX1Q9P291 453 aa9.98□□□□□ -0.81
CBX3P4-202ENST00000540428 ERVK-18Q9QC07 812 aa9.98□□□□□ -0.81
CBX3P4-202ENST00000540428 F5H5K5 113 aa9.97□□□□□ -0.81
CBX3P4-202ENST00000540428 LGALS8O00214 317 aa9.97□□□□□ -0.81
CBX3P4-202ENST00000540428 NDUFA2O43678 99 aa9.97□□□□□ -0.81
CBX3P4-202ENST00000540428 GMDSO60547 372 aa9.97□□□□□ -0.81
CBX3P4-202ENST00000540428 MELTFP08582 738 aa9.97□□□□□ -0.81
CBX3P4-202ENST00000540428 COX4I1P13073 169 aa9.97□□□□□ -0.81
CBX3P4-202ENST00000540428 MMP9P14780 707 aa9.97□□□□□ -0.81
CBX3P4-202ENST00000540428 SLC6A6P31641 620 aa9.97□□□□□ -0.81
CBX3P4-202ENST00000540428 TPTEP56180 551 aa9.97□□□□□ -0.81
CBX3P4-202ENST00000540428 SF3A3Q12874 501 aaKnown RBP eCLIP9.97□□□□□ -0.81
CBX3P4-202ENST00000540428 TRAP1Q12931 704 aaKnown RBP9.97□□□□□ -0.81
CBX3P4-202ENST00000540428 PDCD1Q15116 288 aa9.97□□□□□ -0.81
CBX3P4-202ENST00000540428 SEC23BQ15437 767 aa9.97□□□□□ -0.81
CBX3P4-202ENST00000540428 RFX4Q33E94 735 aa9.97□□□□□ -0.81
CBX3P4-202ENST00000540428 CFAP77Q6ZQR2 320 aa9.97□□□□□ -0.81
CBX3P4-202ENST00000540428 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.97□□□□□ -0.81
CBX3P4-202ENST00000540428 ZBTB46Q86UZ6 589 aa9.97□□□□□ -0.81
CBX3P4-202ENST00000540428 KIR3DL3Q8N743 410 aa9.97□□□□□ -0.81
CBX3P4-202ENST00000540428 PNLDC1Q8NA58 520 aaKnown RBP9.97□□□□□ -0.81
CBX3P4-202ENST00000540428 OR2AJ1Q8NGZ0 328 aa9.97□□□□□ -0.81
CBX3P4-202ENST00000540428 SPRYD4Q8WW59 207 aaPredicted RBP9.97□□□□□ -0.81
CBX3P4-202ENST00000540428 SSMEM1Q8WWF3 244 aa9.97□□□□□ -0.81
CBX3P4-202ENST00000540428 GATAD2BQ8WXI9 593 aa9.97□□□□□ -0.81
CBX3P4-202ENST00000540428 SLCO4A1Q96BD0 722 aa9.97□□□□□ -0.81
CBX3P4-202ENST00000540428 C7orf34Q96L11 122 aa9.97□□□□□ -0.81
CBX3P4-202ENST00000540428 NMNAT3Q96T66 252 aa9.97□□□□□ -0.81
CBX3P4-202ENST00000540428 CITED1Q99966 193 aa9.97□□□□□ -0.81
CBX3P4-202ENST00000540428 KCTD14Q9BQ13 255 aaPredicted RBP9.97□□□□□ -0.81
CBX3P4-202ENST00000540428 PCGF1Q9BSM1 259 aa9.97□□□□□ -0.81
CBX3P4-202ENST00000540428 FUZQ9BT04 418 aa9.97□□□□□ -0.81
CBX3P4-202ENST00000540428 CHIAQ9BZP6 476 aa9.97□□□□□ -0.81
CBX3P4-202ENST00000540428 EFCAB1Q9HAE3 211 aa9.97□□□□□ -0.81
CBX3P4-202ENST00000540428 SRA1Q9HD15 236 aaKnown RBP9.97□□□□□ -0.81
CBX3P4-202ENST00000540428 PNRC2Q9NPJ4 139 aaKnown RBP9.97□□□□□ -0.81
CBX3P4-202ENST00000540428 RNF7Q9UBF6 113 aa9.97□□□□□ -0.81
CBX3P4-202ENST00000540428 ABCD2Q9UBJ2 740 aa9.97□□□□□ -0.81
CBX3P4-202ENST00000540428 CYB5R1Q9UHQ9 305 aa9.97□□□□□ -0.81
CBX3P4-202ENST00000540428 KCNG2Q9UJ96 466 aa9.97□□□□□ -0.81
CBX3P4-202ENST00000540428 TMCC3Q9ULS5 477 aa9.97□□□□□ -0.81
CBX3P4-202ENST00000540428 SAMD4AQ9UPU9 718 aaKnown RBP9.97□□□□□ -0.81
CBX3P4-202ENST00000540428 TRAV38-1A0A0B4J264 116 aa9.96□□□□□ -0.82
CBX3P4-202ENST00000540428 A0A0G2JK05 382 aa9.96□□□□□ -0.82
CBX3P4-202ENST00000540428 TRBV4-1A0A0J9YWV2 114 aa9.96□□□□□ -0.82
CBX3P4-202ENST00000540428 CENPVL3A0A0U1RRI6 287 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms