RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 EDARADDQ8WWZ3 215 aa7.84□□□□□ -1.16
DDB1-217ENST00000540166 OR6C1Q96RD1 312 aa7.84□□□□□ -1.16
DDB1-217ENST00000540166 MTHFD2LQ9H903 347 aaPredicted RBP7.84□□□□□ -1.16
DDB1-217ENST00000540166 BCL2L10Q9HD36 194 aa7.84□□□□□ -1.16
DDB1-217ENST00000540166 FAM212BQ9NTI7 297 aaPredicted RBP7.84□□□□□ -1.16
DDB1-217ENST00000540166 LAMP5Q9UJQ1 280 aa7.84□□□□□ -1.16
DDB1-217ENST00000540166 IER3IP1Q9Y5U9 82 aa7.84□□□□□ -1.16
DDB1-217ENST00000540166 SPACA6W5XKT8 324 aa7.84□□□□□ -1.16
DDB1-217ENST00000540166 NUP210Q8TEM1 1887 aaPredicted RBP7.84□□□□□ -1.16
DDB1-217ENST00000540166 SPTBP11277 2137 aa7.83□□□□□ -1.16
DDB1-217ENST00000540166 LOC390937A0A1W2PQ73 354 aa7.83□□□□□ -1.16
DDB1-217ENST00000540166 ZNF726A6NNF4 738 aa7.83□□□□□ -1.16
DDB1-217ENST00000540166 KCNAB3O43448 404 aa7.83□□□□□ -1.16
DDB1-217ENST00000540166 HEXBP07686 556 aa7.83□□□□□ -1.16
DDB1-217ENST00000540166 OR8G3PP0DMU2 310 aa7.83□□□□□ -1.16
DDB1-217ENST00000540166 FOLR2P14207 255 aa7.83□□□□□ -1.16
DDB1-217ENST00000540166 CD82P27701 267 aa7.83□□□□□ -1.16
DDB1-217ENST00000540166 SLC36A1Q7Z2H8 476 aa7.83□□□□□ -1.16
DDB1-217ENST00000540166 ZNF679Q8IYX0 411 aa7.83□□□□□ -1.16
DDB1-217ENST00000540166 KDM8Q8N371 416 aa7.83□□□□□ -1.16
DDB1-217ENST00000540166 AMER3Q8N944 861 aa7.83□□□□□ -1.16
DDB1-217ENST00000540166 SLC25A38Q96DW6 304 aa7.83□□□□□ -1.16
DDB1-217ENST00000540166 LMLNQ96KR4 655 aa7.83□□□□□ -1.16
DDB1-217ENST00000540166 NUDT22Q9BRQ3 303 aa7.83□□□□□ -1.16
DDB1-217ENST00000540166 NELFAQ9H3P2 528 aa7.83□□□□□ -1.16
DDB1-217ENST00000540166 PELI2Q9HAT8 420 aa7.83□□□□□ -1.16
DDB1-217ENST00000540166 COL4A3Q01955 1670 aa7.83□□□□□ -1.16
DDB1-217ENST00000540166 A0A1W2PPE3 182 aa7.83□□□□□ -1.16
DDB1-217ENST00000540166 OR52A4PA6NMU1 304 aa7.83□□□□□ -1.16
DDB1-217ENST00000540166 SPINT1O43278 529 aa7.83□□□□□ -1.16
DDB1-217ENST00000540166 UBE2KP61086 200 aa7.83□□□□□ -1.16
DDB1-217ENST00000540166 ZNF85Q03923 595 aa7.83□□□□□ -1.16
DDB1-217ENST00000540166 SURF2Q15527 256 aaPredicted RBP7.83□□□□□ -1.16
DDB1-217ENST00000540166 TMEM244Q5VVB8 128 aa7.83□□□□□ -1.16
DDB1-217ENST00000540166 MRM1Q6IN84 353 aaKnown RBP7.83□□□□□ -1.16
DDB1-217ENST00000540166 FAM180AQ6UWF9 173 aa7.83□□□□□ -1.16
DDB1-217ENST00000540166 C6orf15Q6UXA7 325 aaPredicted RBP7.83□□□□□ -1.16
DDB1-217ENST00000540166 ETV3LQ6ZN32 361 aa7.83□□□□□ -1.16
DDB1-217ENST00000540166 RERGQ96A58 199 aaPredicted RBP7.83□□□□□ -1.16
DDB1-217ENST00000540166 WDR13Q9H1Z4 485 aa7.83□□□□□ -1.16
DDB1-217ENST00000540166 MKKSQ9NPJ1 570 aaPredicted RBP7.83□□□□□ -1.16
DDB1-217ENST00000540166 LUZP4Q9P127 313 aa7.83□□□□□ -1.16
DDB1-217ENST00000540166 RALYQ9UKM9 306 aaKnown RBP7.83□□□□□ -1.16
DDB1-217ENST00000540166 KCNE3Q9Y6H6 103 aa7.83□□□□□ -1.16
DDB1-217ENST00000540166 DENND4AQ7Z401 1863 aa7.83□□□□□ -1.16
DDB1-217ENST00000540166 NPIPA5A0A0B4J1W7 369 aa7.83□□□□□ -1.16
DDB1-217ENST00000540166 NPIPA7E9PJI5 369 aa7.83□□□□□ -1.16
DDB1-217ENST00000540166 SULT2B1O00204 365 aa7.83□□□□□ -1.16
DDB1-217ENST00000540166 CDC42EP2O14613 210 aa7.83□□□□□ -1.16
DDB1-217ENST00000540166 FCMRO60667 390 aa7.83□□□□□ -1.16
DDB1-217ENST00000540166 DNAJB6O75190 326 aa7.83□□□□□ -1.16
DDB1-217ENST00000540166 PLGP00747 810 aaPredicted RBP7.83□□□□□ -1.16
DDB1-217ENST00000540166 CELA2BP08218 269 aaPredicted RBP7.83□□□□□ -1.16
DDB1-217ENST00000540166 NPIPA8P0DM63 369 aa7.83□□□□□ -1.16
DDB1-217ENST00000540166 OTX2P32243 289 aa7.83□□□□□ -1.16
DDB1-217ENST00000540166 OR3A2P47893 321 aa7.83□□□□□ -1.16
DDB1-217ENST00000540166 CDX1P47902 265 aaPredicted RBP7.83□□□□□ -1.16
DDB1-217ENST00000540166 ERV3-1Q14264 604 aa7.83□□□□□ -1.16
DDB1-217ENST00000540166 LYG2Q86SG7 212 aa7.83□□□□□ -1.16
DDB1-217ENST00000540166 PRSS58Q8IYP2 241 aa7.83□□□□□ -1.16
DDB1-217ENST00000540166 SLC22A18ASQ8N1D0 253 aa7.83□□□□□ -1.16
DDB1-217ENST00000540166 OR13C9Q8NGT0 318 aa7.83□□□□□ -1.16
DDB1-217ENST00000540166 OR5K2Q8NHB8 316 aa7.83□□□□□ -1.16
DDB1-217ENST00000540166 THRSPQ92748 146 aa7.83□□□□□ -1.16
DDB1-217ENST00000540166 DIO2Q92813 273 aa7.83□□□□□ -1.16
DDB1-217ENST00000540166 SLC22A18Q96BI1 424 aa7.83□□□□□ -1.16
DDB1-217ENST00000540166 PGLYRP3Q96LB9 341 aa7.83□□□□□ -1.16
DDB1-217ENST00000540166 ZNF71Q9NQZ8 489 aaPredicted RBP7.83□□□□□ -1.16
DDB1-217ENST00000540166 SIRT3Q9NTG7 399 aaPredicted RBP7.83□□□□□ -1.16
DDB1-217ENST00000540166 FBXO7Q9Y3I1 522 aa7.83□□□□□ -1.16
DDB1-217ENST00000540166 ATG4BQ9Y4P1 393 aa7.83□□□□□ -1.16
DDB1-217ENST00000540166 PCYT1BQ9Y5K3 369 aaPredicted RBP7.83□□□□□ -1.16
DDB1-217ENST00000540166 SPTAN1Q13813 2472 aaKnown RBP7.82□□□□□ -1.16
DDB1-217ENST00000540166 TRAV14DV4A0A0A6YYC5 116 aa7.82□□□□□ -1.16
DDB1-217ENST00000540166 A0A1W2PPE2 198 aa7.82□□□□□ -1.16
DDB1-217ENST00000540166 TMEM127O75204 238 aa7.82□□□□□ -1.16
DDB1-217ENST00000540166 QDPRP09417 244 aa7.82□□□□□ -1.16
DDB1-217ENST00000540166 HPGDP15428 266 aa7.82□□□□□ -1.16
DDB1-217ENST00000540166 ZNF25P17030 456 aaPredicted RBP7.82□□□□□ -1.16
DDB1-217ENST00000540166 FGF7P21781 194 aa7.82□□□□□ -1.16
DDB1-217ENST00000540166 CMPK1P30085 196 aa7.82□□□□□ -1.16
DDB1-217ENST00000540166 SULT1A1P50225 295 aa7.82□□□□□ -1.16
DDB1-217ENST00000540166 OR2T2Q6IF00 324 aa7.82□□□□□ -1.16
DDB1-217ENST00000540166 ZNF813Q6ZN06 617 aa7.82□□□□□ -1.16
DDB1-217ENST00000540166 OR6N2Q8NGY6 317 aa7.82□□□□□ -1.16
DDB1-217ENST00000540166 PFN4Q8NHR9 129 aa7.82□□□□□ -1.16
DDB1-217ENST00000540166 CDS1Q92903 461 aa7.82□□□□□ -1.16
DDB1-217ENST00000540166 FAM3DQ96BQ1 224 aa7.82□□□□□ -1.16
DDB1-217ENST00000540166 ARSGQ96EG1 525 aa7.82□□□□□ -1.16
DDB1-217ENST00000540166 C14orf144Q96I85 54 aa7.82□□□□□ -1.16
DDB1-217ENST00000540166 SCGB3A2Q96PL1 93 aa7.82□□□□□ -1.16
DDB1-217ENST00000540166 ADGRL4Q9HBW9 690 aa7.82□□□□□ -1.16
DDB1-217ENST00000540166 KCNG2Q9UJ96 466 aa7.82□□□□□ -1.16
DDB1-217ENST00000540166 PTPRQQ9UMZ3 2332 aa7.82□□□□□ -1.16
DDB1-217ENST00000540166 OR10H2O60403 315 aa7.82□□□□□ -1.16
DDB1-217ENST00000540166 STK17BO94768 372 aa7.82□□□□□ -1.16
DDB1-217ENST00000540166 IFNA21P01568 189 aa7.82□□□□□ -1.16
DDB1-217ENST00000540166 TMIGD3P0DMS9 266 aaPredicted RBP7.82□□□□□ -1.16
DDB1-217ENST00000540166 HIST1H1TP22492 207 aaPredicted RBP7.82□□□□□ -1.16
DDB1-217ENST00000540166 DPP4P27487 766 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms