RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 FARS2O95363 451 aaKnown RBP18.09■□□□□ 0.49
TMEM260-203ENST00000539559 ARRB1P49407 418 aaPredicted RBP18.09■□□□□ 0.49
TMEM260-203ENST00000539559 CCDC157Q569K6 752 aa18.09■□□□□ 0.49
TMEM260-203ENST00000539559 COX15Q7KZN9 410 aa18.09■□□□□ 0.49
TMEM260-203ENST00000539559 ADAT3Q96EY9 351 aaPredicted RBP18.09■□□□□ 0.49
TMEM260-203ENST00000539559 RTTNQ86VV8 2226 aa18.09■□□□□ 0.49
TMEM260-203ENST00000539559 METTL21EPA6NDL7 271 aa18.09■□□□□ 0.49
TMEM260-203ENST00000539559 TTLL8A6PVC2 850 aa18.09■□□□□ 0.49
TMEM260-203ENST00000539559 ZNF705EA8MWA4 302 aaPredicted RBP18.09■□□□□ 0.49
TMEM260-203ENST00000539559 IFNA6P05013 189 aa18.09■□□□□ 0.49
TMEM260-203ENST00000539559 VSIG8P0DPA2 414 aa18.09■□□□□ 0.49
TMEM260-203ENST00000539559 GP1BBP13224 206 aa18.09■□□□□ 0.49
TMEM260-203ENST00000539559 KCNJ3P48549 501 aa18.09■□□□□ 0.49
TMEM260-203ENST00000539559 GLO1Q04760 184 aa18.09■□□□□ 0.49
TMEM260-203ENST00000539559 AIMP2Q13155 320 aaKnown RBP18.09■□□□□ 0.49
TMEM260-203ENST00000539559 ZNF813Q6ZN06 617 aa18.09■□□□□ 0.49
TMEM260-203ENST00000539559 Q6ZS52 159 aa18.09■□□□□ 0.49
TMEM260-203ENST00000539559 TBL1XR1Q9BZK7 514 aa18.09■□□□□ 0.49
TMEM260-203ENST00000539559 HRH4Q9H3N8 390 aa18.09■□□□□ 0.49
TMEM260-203ENST00000539559 RAB19A4D1S5 217 aa18.08■□□□□ 0.49
TMEM260-203ENST00000539559 PRAMEF26H0Y7S4 382 aa18.08■□□□□ 0.49
TMEM260-203ENST00000539559 SSX5O60225 188 aa18.08■□□□□ 0.49
TMEM260-203ENST00000539559 NPY4RP50391 375 aa18.08■□□□□ 0.49
TMEM260-203ENST00000539559 AKIRIN2Q53H80 203 aa18.08■□□□□ 0.49
TMEM260-203ENST00000539559 C1orf140Q5VVS0 124 aa18.08■□□□□ 0.49
TMEM260-203ENST00000539559 C16orf47Q6ZP98 133 aaPredicted RBP18.08■□□□□ 0.49
TMEM260-203ENST00000539559 OR13C9Q8NGT0 318 aa18.08■□□□□ 0.49
TMEM260-203ENST00000539559 MED29Q9NX70 200 aa18.08■□□□□ 0.49
TMEM260-203ENST00000539559 VSX1Q9NZR4 365 aaPredicted RBP18.08■□□□□ 0.49
TMEM260-203ENST00000539559 LINC01387J3KSC0 135 aa18.08■□□□□ 0.48
TMEM260-203ENST00000539559 ZNF217O75362 1048 aa18.08■□□□□ 0.48
TMEM260-203ENST00000539559 H2AFB1P0C5Y9 115 aa18.08■□□□□ 0.48
TMEM260-203ENST00000539559 SRFP11831 508 aa18.08■□□□□ 0.48
TMEM260-203ENST00000539559 ZNF823P16415 610 aa18.08■□□□□ 0.48
TMEM260-203ENST00000539559 RABIFP47224 123 aa18.08■□□□□ 0.48
TMEM260-203ENST00000539559 C1orf100Q5SVJ3 147 aa18.08■□□□□ 0.48
TMEM260-203ENST00000539559 UQCC3Q6UW78 93 aa18.08■□□□□ 0.48
TMEM260-203ENST00000539559 TTLL10Q6ZVT0 673 aa18.08■□□□□ 0.48
TMEM260-203ENST00000539559 LYPD6Q86Y78 171 aa18.08■□□□□ 0.48
TMEM260-203ENST00000539559 ADIPOR1Q96A54 375 aa18.08■□□□□ 0.48
TMEM260-203ENST00000539559 TGM7Q96PF1 710 aa18.08■□□□□ 0.48
TMEM260-203ENST00000539559 USB1Q9BQ65 265 aaKnown RBP18.08■□□□□ 0.48
TMEM260-203ENST00000539559 SOX7Q9BT81 388 aa18.08■□□□□ 0.48
TMEM260-203ENST00000539559 CYTL1Q9NRR1 136 aa18.08■□□□□ 0.48
TMEM260-203ENST00000539559 OR5AC2Q9NZP5 309 aa18.08■□□□□ 0.48
TMEM260-203ENST00000539559 DHCR7Q9UBM7 475 aaKnown RBP18.08■□□□□ 0.48
TMEM260-203ENST00000539559 THADAQ6YHU6 1953 aa18.07■□□□□ 0.48
TMEM260-203ENST00000539559 PLPP3O14495 311 aa18.07■□□□□ 0.48
TMEM260-203ENST00000539559 FGF16O43320 207 aa18.07■□□□□ 0.48
TMEM260-203ENST00000539559 IGHV4-34P06331 123 aa18.07■□□□□ 0.48
TMEM260-203ENST00000539559 SPP1P10451 314 aa18.07■□□□□ 0.48
TMEM260-203ENST00000539559 RORAP35398 523 aa18.07■□□□□ 0.48
TMEM260-203ENST00000539559 RAB13P51153 203 aa18.07■□□□□ 0.48
TMEM260-203ENST00000539559 BAP18Q8IXM2 172 aa18.07■□□□□ 0.48
TMEM260-203ENST00000539559 SLC2A4RGQ9NR83 387 aa18.07■□□□□ 0.48
TMEM260-203ENST00000539559 SLC2A8Q9NY64 477 aa18.07■□□□□ 0.48
TMEM260-203ENST00000539559 RAB22AQ9UL26 194 aa18.07■□□□□ 0.48
TMEM260-203ENST00000539559 CYP8B1Q9UNU6 501 aa18.07■□□□□ 0.48
TMEM260-203ENST00000539559 SDK1Q7Z5N4 2213 aa18.07■□□□□ 0.48
TMEM260-203ENST00000539559 IGHV5-51A0A0C4DH38 117 aa18.07■□□□□ 0.48
TMEM260-203ENST00000539559 MEGF11A6BM72 1044 aa18.07■□□□□ 0.48
TMEM260-203ENST00000539559 IGLV3-19P01714 112 aa18.07■□□□□ 0.48
TMEM260-203ENST00000539559 CCR5P51681 352 aa18.07■□□□□ 0.48
TMEM260-203ENST00000539559 FZD2Q14332 565 aa18.07■□□□□ 0.48
TMEM260-203ENST00000539559 RAB11FIP2Q7L804 512 aa18.07■□□□□ 0.48
TMEM260-203ENST00000539559 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.07■□□□□ 0.48
TMEM260-203ENST00000539559 UBE2ZQ9H832 354 aaPredicted RBP18.07■□□□□ 0.48
TMEM260-203ENST00000539559 PHF3Q92576 2039 aaKnown RBP18.07■□□□□ 0.48
TMEM260-203ENST00000539559 A0A1W2PP11 408 aa18.06■□□□□ 0.48
TMEM260-203ENST00000539559 AGPAT2O15120 278 aa18.06■□□□□ 0.48
TMEM260-203ENST00000539559 THEGLP0DJG4 465 aa18.06■□□□□ 0.48
TMEM260-203ENST00000539559 TPT1P13693 172 aaKnown RBP18.06■□□□□ 0.48
TMEM260-203ENST00000539559 HLA-GP17693 338 aa18.06■□□□□ 0.48
TMEM260-203ENST00000539559 KIAA0895LQ68EN5 471 aa18.06■□□□□ 0.48
TMEM260-203ENST00000539559 C9orf40Q8IXQ3 194 aa18.06■□□□□ 0.48
TMEM260-203ENST00000539559 ST7LQ8TDW4 575 aa18.06■□□□□ 0.48
TMEM260-203ENST00000539559 EMC6Q9BV81 110 aa18.06■□□□□ 0.48
TMEM260-203ENST00000539559 LANCL2Q9NS86 450 aa18.06■□□□□ 0.48
TMEM260-203ENST00000539559 C10orf142B7Z368 130 aa18.06■□□□□ 0.48
TMEM260-203ENST00000539559 DXOO77932 396 aaKnown RBP18.06■□□□□ 0.48
TMEM260-203ENST00000539559 DDAH2O95865 285 aa18.06■□□□□ 0.48
TMEM260-203ENST00000539559 TDGQ13569 410 aa18.06■□□□□ 0.48
TMEM260-203ENST00000539559 ZNF528Q3MIS6 628 aa18.06■□□□□ 0.48
TMEM260-203ENST00000539559 COL13A1Q5TAT6 717 aaPredicted RBP18.06■□□□□ 0.48
TMEM260-203ENST00000539559 HIST2H2ABQ8IUE6 130 aaPredicted RBP18.06■□□□□ 0.48
TMEM260-203ENST00000539559 FOXRED2Q8IWF2 684 aa18.06■□□□□ 0.48
TMEM260-203ENST00000539559 ZDHHC22Q8N966 263 aa18.06■□□□□ 0.48
TMEM260-203ENST00000539559 SLC26A10Q8NG04 563 aa18.06■□□□□ 0.48
TMEM260-203ENST00000539559 OR51F2Q8NH61 342 aa18.06■□□□□ 0.48
TMEM260-203ENST00000539559 ARL11Q969Q4 196 aa18.06■□□□□ 0.48
TMEM260-203ENST00000539559 SLC46A1Q96NT5 459 aa18.06■□□□□ 0.48
TMEM260-203ENST00000539559 CNTNAP3BQ96NU0 1288 aa18.06■□□□□ 0.48
TMEM260-203ENST00000539559 BANF2Q9H503 90 aa18.06■□□□□ 0.48
TMEM260-203ENST00000539559 MED12Q93074 2177 aa18.06■□□□□ 0.48
TMEM260-203ENST00000539559 TMEM265A0A087WTH1 108 aa18.06■□□□□ 0.48
TMEM260-203ENST00000539559 LOC390937A0A1W2PQ73 354 aa18.06■□□□□ 0.48
TMEM260-203ENST00000539559 DUS4LO95620 317 aaKnown RBP18.06■□□□□ 0.48
TMEM260-203ENST00000539559 CRYBA1P05813 215 aa18.06■□□□□ 0.48
TMEM260-203ENST00000539559 H2BFMP0C1H6 154 aa18.06■□□□□ 0.48
TMEM260-203ENST00000539559 ANOS1P23352 680 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms