RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 C5orf34Q96MH7 638 aa9.81□□□□□ -0.84
CLSTN3-207ENST00000537408 STEAP1Q9UHE8 339 aa9.81□□□□□ -0.84
CLSTN3-207ENST00000537408 RALGAPA2Q2PPJ7 1873 aa9.81□□□□□ -0.84
CLSTN3-207ENST00000537408 TDRD15B5MCY1 1934 aaKnown RBP9.81□□□□□ -0.84
CLSTN3-207ENST00000537408 ETHE1O95571 254 aa9.81□□□□□ -0.84
CLSTN3-207ENST00000537408 CD1AP06126 327 aa9.81□□□□□ -0.84
CLSTN3-207ENST00000537408 SNCAP37840 140 aa9.81□□□□□ -0.84
CLSTN3-207ENST00000537408 TAS2R31P59538 309 aa9.81□□□□□ -0.84
CLSTN3-207ENST00000537408 AMZ1Q400G9 498 aa9.81□□□□□ -0.84
CLSTN3-207ENST00000537408 PRSS54Q6PEW0 395 aa9.81□□□□□ -0.84
CLSTN3-207ENST00000537408 TMEM105Q8N8V8 129 aa9.81□□□□□ -0.84
CLSTN3-207ENST00000537408 ACOT4Q8N9L9 421 aa9.81□□□□□ -0.84
CLSTN3-207ENST00000537408 SMPDL3AQ92484 453 aa9.81□□□□□ -0.84
CLSTN3-207ENST00000537408 MRGPRX1Q96LB2 322 aa9.81□□□□□ -0.84
CLSTN3-207ENST00000537408 OR52D1Q9H346 318 aa9.81□□□□□ -0.84
CLSTN3-207ENST00000537408 FAM157AC9JC47 383 aa9.81□□□□□ -0.84
CLSTN3-207ENST00000537408 KCNAB3O43448 404 aa9.81□□□□□ -0.84
CLSTN3-207ENST00000537408 JTBO76095 146 aa9.81□□□□□ -0.84
CLSTN3-207ENST00000537408 SCAF4O95104 1147 aaKnown RBP9.81□□□□□ -0.84
CLSTN3-207ENST00000537408 ST6GAL1P15907 406 aa9.81□□□□□ -0.84
CLSTN3-207ENST00000537408 APLNRP35414 380 aa9.81□□□□□ -0.84
CLSTN3-207ENST00000537408 WBP2Q969T9 261 aa9.81□□□□□ -0.84
CLSTN3-207ENST00000537408 DNAJC4Q9NNZ3 241 aa9.81□□□□□ -0.84
CLSTN3-207ENST00000537408 MYO10Q9HD67 2058 aa9.8□□□□□ -0.84
CLSTN3-207ENST00000537408 A0A1B0GVT2 93 aa9.8□□□□□ -0.84
CLSTN3-207ENST00000537408 FAM171A2A8MVW0 826 aa9.8□□□□□ -0.84
CLSTN3-207ENST00000537408 PLRG1O43660 514 aaKnown RBP9.8□□□□□ -0.84
CLSTN3-207ENST00000537408 NME2P1O60361 137 aa9.8□□□□□ -0.84
CLSTN3-207ENST00000537408 KLK1P06870 262 aa9.8□□□□□ -0.84
CLSTN3-207ENST00000537408 S100A10P60903 97 aa9.8□□□□□ -0.84
CLSTN3-207ENST00000537408 PAX5Q02548 391 aa9.8□□□□□ -0.84
CLSTN3-207ENST00000537408 ZNF774Q6NX45 483 aa9.8□□□□□ -0.84
CLSTN3-207ENST00000537408 ANKRD16Q6P6B7 361 aa9.8□□□□□ -0.84
CLSTN3-207ENST00000537408 FAM220AQ7Z4H9 259 aa9.8□□□□□ -0.84
CLSTN3-207ENST00000537408 OR2L3Q8NG85 312 aa9.8□□□□□ -0.84
CLSTN3-207ENST00000537408 FAM210BQ96KR6 192 aa9.8□□□□□ -0.84
CLSTN3-207ENST00000537408 SNX22Q96L94 193 aa9.8□□□□□ -0.84
CLSTN3-207ENST00000537408 TM7SF3Q9NS93 570 aa9.8□□□□□ -0.84
CLSTN3-207ENST00000537408 STARD10Q9Y365 291 aa9.8□□□□□ -0.84
CLSTN3-207ENST00000537408 C4orf47A7E2U8 309 aa9.8□□□□□ -0.84
CLSTN3-207ENST00000537408 B4DGG1 531 aa9.8□□□□□ -0.84
CLSTN3-207ENST00000537408 HMGN4O00479 90 aa9.8□□□□□ -0.84
CLSTN3-207ENST00000537408 RRP8O43159 456 aaKnown RBP9.8□□□□□ -0.84
CLSTN3-207ENST00000537408 SCGB1D1O95968 90 aa9.8□□□□□ -0.84
CLSTN3-207ENST00000537408 CEBPGP53567 150 aa9.8□□□□□ -0.84
CLSTN3-207ENST00000537408 EIF4EBP2Q13542 120 aaPredicted RBP9.8□□□□□ -0.84
CLSTN3-207ENST00000537408 C4orf17Q53FE4 359 aa9.8□□□□□ -0.84
CLSTN3-207ENST00000537408 WDR88Q6ZMY6 472 aa9.8□□□□□ -0.84
CLSTN3-207ENST00000537408 MBOAT2Q6ZWT7 520 aa9.8□□□□□ -0.84
CLSTN3-207ENST00000537408 ZNF627Q7L945 461 aa9.8□□□□□ -0.84
CLSTN3-207ENST00000537408 SLC25A42Q86VD7 318 aa9.8□□□□□ -0.84
CLSTN3-207ENST00000537408 ZNF584Q8IVC4 421 aa9.8□□□□□ -0.84
CLSTN3-207ENST00000537408 ZNF321PQ8N8H1 164 aa9.8□□□□□ -0.84
CLSTN3-207ENST00000537408 CADM4Q8NFZ8 388 aa9.8□□□□□ -0.84
CLSTN3-207ENST00000537408 GLYATL1Q969I3 302 aa9.8□□□□□ -0.84
CLSTN3-207ENST00000537408 TMEM18Q96B42 140 aa9.8□□□□□ -0.84
CLSTN3-207ENST00000537408 CMBLQ96DG6 245 aa9.8□□□□□ -0.84
CLSTN3-207ENST00000537408 CNN2Q99439 309 aaKnown RBP9.8□□□□□ -0.84
CLSTN3-207ENST00000537408 PDCD1LG2Q9BQ51 273 aa9.8□□□□□ -0.84
CLSTN3-207ENST00000537408 VPS25Q9BRG1 176 aa9.8□□□□□ -0.84
CLSTN3-207ENST00000537408 ZNF2Q9BSG1 426 aaPredicted RBP9.8□□□□□ -0.84
CLSTN3-207ENST00000537408 OR8D2Q9GZM6 311 aa9.8□□□□□ -0.84
CLSTN3-207ENST00000537408 CHRNA9Q9UGM1 479 aa9.8□□□□□ -0.84
CLSTN3-207ENST00000537408 ATG4BQ9Y4P1 393 aa9.8□□□□□ -0.84
CLSTN3-207ENST00000537408 COLEC10Q9Y6Z7 277 aa9.8□□□□□ -0.84
CLSTN3-207ENST00000537408 NYNRINQ9P2P1 1898 aaKnown RBP9.8□□□□□ -0.84
CLSTN3-207ENST00000537408 A0A087WWC5 75 aa9.8□□□□□ -0.84
CLSTN3-207ENST00000537408 TRBV6-7A0A0A0MS04 114 aa9.8□□□□□ -0.84
CLSTN3-207ENST00000537408 SAP18O00422 153 aaKnown RBP9.8□□□□□ -0.84
CLSTN3-207ENST00000537408 CDC14BO60729 498 aa9.8□□□□□ -0.84
CLSTN3-207ENST00000537408 WNT11O96014 354 aa9.8□□□□□ -0.84
CLSTN3-207ENST00000537408 TK1P04183 234 aa9.8□□□□□ -0.84
CLSTN3-207ENST00000537408 LINC00271P0C7V0 271 aa9.8□□□□□ -0.84
CLSTN3-207ENST00000537408 AKR1C4P17516 323 aa9.8□□□□□ -0.84
CLSTN3-207ENST00000537408 ZNF10P21506 573 aaPredicted RBP9.8□□□□□ -0.84
CLSTN3-207ENST00000537408 FCARP24071 287 aa9.8□□□□□ -0.84
CLSTN3-207ENST00000537408 PTTG1IPP53801 180 aa9.8□□□□□ -0.84
CLSTN3-207ENST00000537408 PHF19Q5T6S3 580 aa9.8□□□□□ -0.84
CLSTN3-207ENST00000537408 RPL7L1Q6DKI1 246 aaKnown RBP9.8□□□□□ -0.84
CLSTN3-207ENST00000537408 OPN5Q6U736 354 aa9.8□□□□□ -0.84
CLSTN3-207ENST00000537408 MMP21Q8N119 569 aa9.8□□□□□ -0.84
CLSTN3-207ENST00000537408 CCDC74BQ96LY2 380 aa9.8□□□□□ -0.84
CLSTN3-207ENST00000537408 ICKQ9UPZ9 632 aa9.8□□□□□ -0.84
CLSTN3-207ENST00000537408 BORCS7-ASMTA0A0B4J1R7 106 aa9.79□□□□□ -0.84
CLSTN3-207ENST00000537408 NPIPB15A6NHN6 443 aaPredicted RBP9.79□□□□□ -0.84
CLSTN3-207ENST00000537408 PRRT4C9JH25 899 aa9.79□□□□□ -0.84
CLSTN3-207ENST00000537408 SPINT3P49223 89 aa9.79□□□□□ -0.84
CLSTN3-207ENST00000537408 PFN3P60673 137 aa9.79□□□□□ -0.84
CLSTN3-207ENST00000537408 RBX1P62877 108 aa9.79□□□□□ -0.84
CLSTN3-207ENST00000537408 PPP1R1AQ13522 171 aa9.79□□□□□ -0.84
CLSTN3-207ENST00000537408 COL5A1-AS1Q5SY13 56 aa9.79□□□□□ -0.84
CLSTN3-207ENST00000537408 C11orf42Q8N5U0 333 aa9.79□□□□□ -0.84
CLSTN3-207ENST00000537408 FAM160A2Q8N612 972 aaPredicted RBP9.79□□□□□ -0.84
CLSTN3-207ENST00000537408 ZSCAN4Q8NAM6 433 aaPredicted RBP9.79□□□□□ -0.84
CLSTN3-207ENST00000537408 CLEC1AQ8NC01 280 aa9.79□□□□□ -0.84
CLSTN3-207ENST00000537408 OR52N4Q8NGI2 321 aa9.79□□□□□ -0.84
CLSTN3-207ENST00000537408 WFDC5Q8TCV5 224 aa9.79□□□□□ -0.84
CLSTN3-207ENST00000537408 Q8WTZ3 238 aa9.79□□□□□ -0.84
CLSTN3-207ENST00000537408 ASB11Q8WXH4 323 aa9.79□□□□□ -0.84
CLSTN3-207ENST00000537408 AQP10Q96PS8 301 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms