RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 AQP2P41181 271 aa6.67□□□□□ -1.34
CLIP1-206ENST00000535290 CD200P41217 278 aa6.67□□□□□ -1.34
CLIP1-206ENST00000535290 DAP3P51398 398 aaKnown RBP6.67□□□□□ -1.34
CLIP1-206ENST00000535290 BLCAPP62952 87 aa6.67□□□□□ -1.34
CLIP1-206ENST00000535290 CNN3Q15417 329 aaKnown RBP6.67□□□□□ -1.34
CLIP1-206ENST00000535290 INTS11Q5TA45 600 aaKnown RBP6.67□□□□□ -1.34
CLIP1-206ENST00000535290 OTPQ5XKR4 325 aa6.67□□□□□ -1.34
CLIP1-206ENST00000535290 ZNF826PQ6ZT77 177 aa6.67□□□□□ -1.34
CLIP1-206ENST00000535290 FOXL2NBQ6ZUU3 175 aa6.67□□□□□ -1.34
CLIP1-206ENST00000535290 NANOGNBQ7Z5D8 188 aa6.67□□□□□ -1.34
CLIP1-206ENST00000535290 CNPY4Q8N129 248 aa6.67□□□□□ -1.34
CLIP1-206ENST00000535290 C4orf33Q8N1A6 199 aa6.67□□□□□ -1.34
CLIP1-206ENST00000535290 PCYOX1LQ8NBM8 494 aa6.67□□□□□ -1.34
CLIP1-206ENST00000535290 BBS10Q8TAM1 723 aa6.67□□□□□ -1.34
CLIP1-206ENST00000535290 AENQ8WTP8 325 aaKnown RBP6.67□□□□□ -1.34
CLIP1-206ENST00000535290 MYDGFQ969H8 173 aa6.67□□□□□ -1.34
CLIP1-206ENST00000535290 RASD2Q96D21 266 aa6.67□□□□□ -1.34
CLIP1-206ENST00000535290 ZNF583Q96ND8 569 aa6.67□□□□□ -1.34
CLIP1-206ENST00000535290 CCL13Q99616 98 aa6.67□□□□□ -1.34
CLIP1-206ENST00000535290 EMC7Q9NPA0 242 aa6.67□□□□□ -1.34
CLIP1-206ENST00000535290 KAAG1Q9UBP8 84 aa6.67□□□□□ -1.34
CLIP1-206ENST00000535290 ANGPT4Q9Y264 503 aa6.67□□□□□ -1.34
CLIP1-206ENST00000535290 TSSC4Q9Y5U2 329 aaPredicted RBP6.67□□□□□ -1.34
CLIP1-206ENST00000535290 CAPN7Q9Y6W3 813 aa6.67□□□□□ -1.34
CLIP1-206ENST00000535290 STARD9Q9P2P6 4700 aa6.67□□□□□ -1.34
CLIP1-206ENST00000535290 A0A1W2PPL8 197 aa6.66□□□□□ -1.34
CLIP1-206ENST00000535290 C12orf71A8MTZ7 269 aa6.66□□□□□ -1.34
CLIP1-206ENST00000535290 SGCEO43556 437 aa6.66□□□□□ -1.34
CLIP1-206ENST00000535290 CLIC3O95833 236 aa6.66□□□□□ -1.34
CLIP1-206ENST00000535290 ALDOCP09972 364 aaKnown RBP6.66□□□□□ -1.34
CLIP1-206ENST00000535290 MSR1P21757 451 aa6.66□□□□□ -1.34
CLIP1-206ENST00000535290 BGNP21810 368 aa6.66□□□□□ -1.34
CLIP1-206ENST00000535290 CHATP28329 748 aa6.66□□□□□ -1.34
CLIP1-206ENST00000535290 RAB13P51153 203 aa6.66□□□□□ -1.34
CLIP1-206ENST00000535290 BEND6Q5SZJ8 279 aaPredicted RBP6.66□□□□□ -1.34
CLIP1-206ENST00000535290 HHATQ5VTY9 493 aa6.66□□□□□ -1.34
CLIP1-206ENST00000535290 NCR3LG1Q68D85 454 aa6.66□□□□□ -1.34
CLIP1-206ENST00000535290 UNQ9370/PRO34162Q6UXP9 181 aa6.66□□□□□ -1.34
CLIP1-206ENST00000535290 ETV3LQ6ZN32 361 aa6.66□□□□□ -1.34
CLIP1-206ENST00000535290 ZNF572Q7Z3I7 529 aaPredicted RBP6.66□□□□□ -1.34
CLIP1-206ENST00000535290 HDDC2Q7Z4H3 204 aa6.66□□□□□ -1.34
CLIP1-206ENST00000535290 SYT9Q86SS6 491 aa6.66□□□□□ -1.34
CLIP1-206ENST00000535290 TMEM219Q86XT9 240 aa6.66□□□□□ -1.34
CLIP1-206ENST00000535290 SBSPONQ8IVN8 264 aa6.66□□□□□ -1.34
CLIP1-206ENST00000535290 GCSAMQ8N6F7 178 aa6.66□□□□□ -1.34
CLIP1-206ENST00000535290 FAM216BQ8N7L0 139 aa6.66□□□□□ -1.34
CLIP1-206ENST00000535290 MOSPD2Q8NHP6 518 aa6.66□□□□□ -1.34
CLIP1-206ENST00000535290 CPPED1Q9BRF8 314 aaPredicted RBP6.66□□□□□ -1.34
CLIP1-206ENST00000535290 PRSS22Q9GZN4 317 aa6.66□□□□□ -1.34
CLIP1-206ENST00000535290 METTL8Q9H825 291 aaKnown RBP6.66□□□□□ -1.34
CLIP1-206ENST00000535290 TRIM36Q9NQ86 728 aa6.66□□□□□ -1.34
CLIP1-206ENST00000535290 POLE4Q9NR33 117 aa6.66□□□□□ -1.34
CLIP1-206ENST00000535290 INIPQ9NRY2 104 aa6.66□□□□□ -1.34
CLIP1-206ENST00000535290 THUMPD1Q9NXG2 353 aaKnown RBP6.66□□□□□ -1.34
CLIP1-206ENST00000535290 SF3B6Q9Y3B4 125 aaKnown RBP6.66□□□□□ -1.34
CLIP1-206ENST00000535290 OR6C6A6NF89 314 aa6.65□□□□□ -1.34
CLIP1-206ENST00000535290 C5orf58C9J3I9 102 aa6.65□□□□□ -1.34
CLIP1-206ENST00000535290 M0R3H8 397 aa6.65□□□□□ -1.34
CLIP1-206ENST00000535290 CHP2O43745 196 aa6.65□□□□□ -1.34
CLIP1-206ENST00000535290 RAMP3O60896 148 aa6.65□□□□□ -1.34
CLIP1-206ENST00000535290 SLC22A3O75751 556 aa6.65□□□□□ -1.34
CLIP1-206ENST00000535290 SASH3O75995 380 aa6.65□□□□□ -1.34
CLIP1-206ENST00000535290 PTBP3O95758 552 aaKnown RBP6.65□□□□□ -1.34
CLIP1-206ENST00000535290 SELLP14151 372 aa6.65□□□□□ -1.34
CLIP1-206ENST00000535290 GUCA1AP43080 201 aaPredicted RBP6.65□□□□□ -1.34
CLIP1-206ENST00000535290 VDAC2P45880 294 aaPredicted RBP6.65□□□□□ -1.34
CLIP1-206ENST00000535290 SCRN3Q0VDG4 424 aa6.65□□□□□ -1.34
CLIP1-206ENST00000535290 TOP3AQ13472 1001 aaPredicted RBP6.65□□□□□ -1.34
CLIP1-206ENST00000535290 RGNQ15493 299 aa6.65□□□□□ -1.34
CLIP1-206ENST00000535290 ZNF613Q6PF04 617 aa6.65□□□□□ -1.34
CLIP1-206ENST00000535290 TTC33Q6PID6 262 aaPredicted RBP6.65□□□□□ -1.34
CLIP1-206ENST00000535290 C10orf99Q6UWK7 81 aa6.65□□□□□ -1.34
CLIP1-206ENST00000535290 TRMT10CQ7L0Y3 403 aaKnown RBP6.65□□□□□ -1.34
CLIP1-206ENST00000535290 TSPYL5Q86VY4 417 aaPredicted RBP6.65□□□□□ -1.34
CLIP1-206ENST00000535290 OR5L1Q8NGL2 311 aa6.65□□□□□ -1.34
CLIP1-206ENST00000535290 NFKBIDQ8NI38 313 aa6.65□□□□□ -1.34
CLIP1-206ENST00000535290 ZIM3Q96PE6 472 aa6.65□□□□□ -1.34
CLIP1-206ENST00000535290 RBP7Q96R05 134 aa6.65□□□□□ -1.34
CLIP1-206ENST00000535290 MCHR1Q99705 422 aa6.65□□□□□ -1.34
CLIP1-206ENST00000535290 MCRIP2Q9BUT9 160 aaKnown RBP6.65□□□□□ -1.34
CLIP1-206ENST00000535290 LIN7BQ9HAP6 207 aa6.65□□□□□ -1.34
CLIP1-206ENST00000535290 MEPEQ9NQ76 525 aaPredicted RBP6.65□□□□□ -1.34
CLIP1-206ENST00000535290 C1orf123Q9NWV4 160 aa6.65□□□□□ -1.34
CLIP1-206ENST00000535290 PRPF19Q9UMS4 504 aaKnown RBP6.65□□□□□ -1.34
CLIP1-206ENST00000535290 TCF19Q9Y242 345 aa6.65□□□□□ -1.34
CLIP1-206ENST00000535290 HIF3AQ9Y2N7 669 aa6.65□□□□□ -1.34
CLIP1-206ENST00000535290 TMEM238LA0A1B0GVL6 79 aa6.64□□□□□ -1.35
CLIP1-206ENST00000535290 GMNCA6NCL1 334 aa6.64□□□□□ -1.35
CLIP1-206ENST00000535290 A6NDX4 124 aa6.64□□□□□ -1.35
CLIP1-206ENST00000535290 NKX6-3A6NJ46 265 aa6.64□□□□□ -1.35
CLIP1-206ENST00000535290 CPSF4LA6NMK7 179 aaKnown RBP6.64□□□□□ -1.35
CLIP1-206ENST00000535290 J3QW42 95 aa6.64□□□□□ -1.35
CLIP1-206ENST00000535290 ITM2AO43736 263 aa6.64□□□□□ -1.35
CLIP1-206ENST00000535290 ANP32DO95626 131 aa6.64□□□□□ -1.35
CLIP1-206ENST00000535290 IGF2P01344 180 aa6.64□□□□□ -1.35
CLIP1-206ENST00000535290 ZCCHC18P0CG32 403 aa6.64□□□□□ -1.35
CLIP1-206ENST00000535290 LBPP18428 481 aa6.64□□□□□ -1.35
CLIP1-206ENST00000535290 FUT1P19526 365 aa6.64□□□□□ -1.35
CLIP1-206ENST00000535290 AMY2BP19961 511 aa6.64□□□□□ -1.35
CLIP1-206ENST00000535290 CA6P23280 308 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms