RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 IL20Q9NYY1 176 aa14.99□□□□□ -0.01
SMG1-203ENST00000532700 PDP1Q9P0J1 537 aaPredicted RBP14.99□□□□□ -0.01
SMG1-203ENST00000532700 F5H5K5 113 aa14.98□□□□□ -0.01
SMG1-203ENST00000532700 F5H5P2 479 aa14.98□□□□□ -0.01
SMG1-203ENST00000532700 TIPRLO75663 272 aa14.98□□□□□ -0.01
SMG1-203ENST00000532700 HLA-DPB1P04440 258 aa14.98□□□□□ -0.01
SMG1-203ENST00000532700 SBK2P0C263 348 aa14.98□□□□□ -0.01
SMG1-203ENST00000532700 FASP25445 335 aa14.98□□□□□ -0.01
SMG1-203ENST00000532700 PMELP40967 661 aa14.98□□□□□ -0.01
SMG1-203ENST00000532700 CRMP1Q14194 572 aa14.98□□□□□ -0.01
SMG1-203ENST00000532700 FAM201AQ5SY85 155 aa14.98□□□□□ -0.01
SMG1-203ENST00000532700 CD300LDQ6UXZ3 194 aa14.98□□□□□ -0.01
SMG1-203ENST00000532700 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.98□□□□□ -0.01
SMG1-203ENST00000532700 OR8G5Q8NG78 346 aa14.98□□□□□ -0.01
SMG1-203ENST00000532700 APOBEC3DQ96AK3 386 aaPredicted RBP14.98□□□□□ -0.01
SMG1-203ENST00000532700 RAB39BQ96DA2 213 aa14.98□□□□□ -0.01
SMG1-203ENST00000532700 NRBF2Q96F24 287 aa14.98□□□□□ -0.01
SMG1-203ENST00000532700 TIMD4Q96H15 378 aa14.98□□□□□ -0.01
SMG1-203ENST00000532700 DIRC2Q96SL1 478 aa14.98□□□□□ -0.01
SMG1-203ENST00000532700 FEVQ99581 238 aa14.98□□□□□ -0.01
SMG1-203ENST00000532700 PITX2Q99697 317 aa14.98□□□□□ -0.01
SMG1-203ENST00000532700 NIPSNAP1Q9BPW8 284 aa14.98□□□□□ -0.01
SMG1-203ENST00000532700 RBM4Q9BWF3 364 aaKnown RBP14.98□□□□□ -0.01
SMG1-203ENST00000532700 HCAR1Q9BXC0 346 aa14.98□□□□□ -0.01
SMG1-203ENST00000532700 C1QTNF5Q9BXJ0 243 aa14.98□□□□□ -0.01
SMG1-203ENST00000532700 ZNF556Q9HAH1 456 aa14.98□□□□□ -0.01
SMG1-203ENST00000532700 GCM1Q9NP62 436 aa14.98□□□□□ -0.01
SMG1-203ENST00000532700 MMP26Q9NRE1 261 aa14.98□□□□□ -0.01
SMG1-203ENST00000532700 ANK2Q01484 3957 aa14.97□□□□□ -0.01
SMG1-203ENST00000532700 CYB5R3P00387 301 aaPredicted RBP14.97□□□□□ -0.01
SMG1-203ENST00000532700 HLA-DQA2P01906 255 aa14.97□□□□□ -0.01
SMG1-203ENST00000532700 ANXA8P13928 327 aa14.97□□□□□ -0.01
SMG1-203ENST00000532700 ACTR3P61158 418 aa14.97□□□□□ -0.01
SMG1-203ENST00000532700 GK2Q14410 553 aaPredicted RBP14.97□□□□□ -0.01
SMG1-203ENST00000532700 ATP6AP1Q15904 470 aa14.97□□□□□ -0.01
SMG1-203ENST00000532700 SNAI3Q3KNW1 292 aa14.97□□□□□ -0.01
SMG1-203ENST00000532700 ZMAT1Q5H9K5 638 aa14.97□□□□□ -0.01
SMG1-203ENST00000532700 RFLNBQ8N5W9 214 aa14.97□□□□□ -0.01
SMG1-203ENST00000532700 IQCF1Q8N6M8 205 aa14.97□□□□□ -0.01
SMG1-203ENST00000532700 ZNF511Q8NB15 262 aa14.97□□□□□ -0.01
SMG1-203ENST00000532700 MEGF10Q96KG7 1140 aa14.97□□□□□ -0.01
SMG1-203ENST00000532700 ATF6BQ99941 703 aa14.97□□□□□ -0.01
SMG1-203ENST00000532700 SLC30A2Q9BRI3 323 aa14.97□□□□□ -0.01
SMG1-203ENST00000532700 TSSK6Q9BXA6 273 aa14.97□□□□□ -0.01
SMG1-203ENST00000532700 NMNAT2Q9BZQ4 307 aa14.97□□□□□ -0.01
SMG1-203ENST00000532700 MED20Q9H944 212 aa14.97□□□□□ -0.01
SMG1-203ENST00000532700 TBC1D23Q9NUY8 699 aa14.97□□□□□ -0.01
SMG1-203ENST00000532700 IL19Q9UHD0 177 aa14.97□□□□□ -0.01
SMG1-203ENST00000532700 PPP1R3CQ9UQK1 317 aa14.97□□□□□ -0.01
SMG1-203ENST00000532700 COMMD3-BMI1R4GMX3 469 aa14.97□□□□□ -0.01
SMG1-203ENST00000532700 A0A1B0GWJ7 208 aa14.96□□□□□ -0.01
SMG1-203ENST00000532700 IQCF6A8MYZ5 107 aa14.96□□□□□ -0.01
SMG1-203ENST00000532700 F5H0A9 414 aaPredicted RBP14.96□□□□□ -0.01
SMG1-203ENST00000532700 TRAPPC2LH3BP13 241 aa14.96□□□□□ -0.01
SMG1-203ENST00000532700 TMEM178BH3BS89 294 aa14.96□□□□□ -0.01
SMG1-203ENST00000532700 TCF21O43680 179 aa14.96□□□□□ -0.01
SMG1-203ENST00000532700 FSHBP01225 129 aa14.96□□□□□ -0.01
SMG1-203ENST00000532700 TUBG1P23258 451 aa14.96□□□□□ -0.01
SMG1-203ENST00000532700 RGS6P49758 472 aa14.96□□□□□ -0.01
SMG1-203ENST00000532700 SHQ1Q6PI26 577 aaKnown RBP14.96□□□□□ -0.01
SMG1-203ENST00000532700 LNX2Q8N448 690 aa14.96□□□□□ -0.01
SMG1-203ENST00000532700 ATG16L2Q8NAA4 619 aa14.96□□□□□ -0.01
SMG1-203ENST00000532700 PROKR2Q8NFJ6 384 aa14.96□□□□□ -0.01
SMG1-203ENST00000532700 OR2AE1Q8NHA4 323 aa14.96□□□□□ -0.01
SMG1-203ENST00000532700 DVL3Q92997 716 aaPredicted RBP14.96□□□□□ -0.01
SMG1-203ENST00000532700 OCEL1Q9H607 264 aa14.96□□□□□ -0.01
SMG1-203ENST00000532700 TUBG2Q9NRH3 451 aa14.96□□□□□ -0.01
SMG1-203ENST00000532700 METRNQ9UJH8 293 aa14.96□□□□□ -0.01
SMG1-203ENST00000532700 BAIAP2Q9UQB8 552 aa14.96□□□□□ -0.01
SMG1-203ENST00000532700 WNK2Q9Y3S1 2297 aa14.96□□□□□ -0.01
SMG1-203ENST00000532700 J3QW42 95 aa14.95□□□□□ -0.02
SMG1-203ENST00000532700 BTG1P62324 171 aa14.95□□□□□ -0.02
SMG1-203ENST00000532700 MAB21L1Q13394 359 aa14.95□□□□□ -0.02
SMG1-203ENST00000532700 KPNB1Q14974 876 aaKnown RBP14.95□□□□□ -0.02
SMG1-203ENST00000532700 MOGAT3Q86VF5 341 aa14.95□□□□□ -0.02
SMG1-203ENST00000532700 LRRC28Q86X40 367 aaPredicted RBP14.95□□□□□ -0.02
SMG1-203ENST00000532700 HS3ST5Q8IZT8 346 aa14.95□□□□□ -0.02
SMG1-203ENST00000532700 C19orf18Q8NEA5 215 aa14.95□□□□□ -0.02
SMG1-203ENST00000532700 DEFB108BQ8NET1 73 aa14.95□□□□□ -0.02
SMG1-203ENST00000532700 OR5K1Q8NHB7 308 aa14.95□□□□□ -0.02
SMG1-203ENST00000532700 TEX47Q8TBZ9 253 aa14.95□□□□□ -0.02
SMG1-203ENST00000532700 DNAJC9Q8WXX5 260 aa14.95□□□□□ -0.02
SMG1-203ENST00000532700 NTN4Q9HB63 628 aa14.95□□□□□ -0.02
SMG1-203ENST00000532700 A0A0G2JMP0 313 aa14.94□□□□□ -0.02
SMG1-203ENST00000532700 A0A0X1KG70 313 aa14.94□□□□□ -0.02
SMG1-203ENST00000532700 FAM183AA6NL82 134 aa14.94□□□□□ -0.02
SMG1-203ENST00000532700 LCATP04180 440 aa14.94□□□□□ -0.02
SMG1-203ENST00000532700 SLC2A1P11166 492 aa14.94□□□□□ -0.02
SMG1-203ENST00000532700 SPI1P17947 270 aa14.94□□□□□ -0.02
SMG1-203ENST00000532700 EPHA1P21709 976 aa14.94□□□□□ -0.02
SMG1-203ENST00000532700 PCMT1P22061 227 aa14.94□□□□□ -0.02
SMG1-203ENST00000532700 OTX1P32242 354 aaPredicted RBP14.94□□□□□ -0.02
SMG1-203ENST00000532700 SLC36A3Q495N2 470 aa14.94□□□□□ -0.02
SMG1-203ENST00000532700 LINC01590Q5TEZ4 76 aa14.94□□□□□ -0.02
SMG1-203ENST00000532700 DCAF12L2Q5VW00 463 aa14.94□□□□□ -0.02
SMG1-203ENST00000532700 PRAMEF6Q5VXH4 476 aa14.94□□□□□ -0.02
SMG1-203ENST00000532700 ZFP1Q6P2D0 407 aa14.94□□□□□ -0.02
SMG1-203ENST00000532700 SPATC1Q76KD6 591 aa14.94□□□□□ -0.02
SMG1-203ENST00000532700 DCXRQ7Z4W1 244 aa14.94□□□□□ -0.02
SMG1-203ENST00000532700 C1QL2Q7Z5L3 287 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms