RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 YIF1AO95070 293 aa13.37□□□□□ -0.27
PCDHA9-202ENST00000532602 ZNF26P17031 533 aaPredicted RBP13.37□□□□□ -0.27
PCDHA9-202ENST00000532602 CDAP32320 146 aa13.37□□□□□ -0.27
PCDHA9-202ENST00000532602 SIAH3Q8IW03 269 aa13.37□□□□□ -0.27
PCDHA9-202ENST00000532602 SLC38A9Q8NBW4 561 aa13.37□□□□□ -0.27
PCDHA9-202ENST00000532602 SHPKQ9UHJ6 478 aa13.37□□□□□ -0.27
PCDHA9-202ENST00000532602 RAE1P78406 368 aaKnown RBP13.37□□□□□ -0.27
PCDHA9-202ENST00000532602 DOC2BQ14184 412 aa13.37□□□□□ -0.27
PCDHA9-202ENST00000532602 SMIM21Q3B7S5 101 aa13.37□□□□□ -0.27
PCDHA9-202ENST00000532602 PAQR6Q6TCH4 344 aa13.37□□□□□ -0.27
PCDHA9-202ENST00000532602 OR52N5Q8NH56 324 aa13.37□□□□□ -0.27
PCDHA9-202ENST00000532602 ZDHHC16Q969W1 377 aa13.37□□□□□ -0.27
PCDHA9-202ENST00000532602 TRABD2BA6NFA1 517 aa13.37□□□□□ -0.27
PCDHA9-202ENST00000532602 PATE3B3GLJ2 98 aa13.37□□□□□ -0.27
PCDHA9-202ENST00000532602 SNRNP70P08621 437 aaKnown RBP13.37□□□□□ -0.27
PCDHA9-202ENST00000532602 CNR1P21554 472 aa13.37□□□□□ -0.27
PCDHA9-202ENST00000532602 FABP6P51161 128 aa13.37□□□□□ -0.27
PCDHA9-202ENST00000532602 TPBGQ13641 420 aa13.37□□□□□ -0.27
PCDHA9-202ENST00000532602 CLINT1Q14677 625 aa13.37□□□□□ -0.27
PCDHA9-202ENST00000532602 HMGN3Q15651 99 aa13.37□□□□□ -0.27
PCDHA9-202ENST00000532602 ZNF766Q5HY98 468 aa13.37□□□□□ -0.27
PCDHA9-202ENST00000532602 HES3Q5TGS1 186 aa13.37□□□□□ -0.27
PCDHA9-202ENST00000532602 GABRG1Q8N1C3 465 aa13.37□□□□□ -0.27
PCDHA9-202ENST00000532602 FBXL2Q9UKC9 423 aa13.37□□□□□ -0.27
PCDHA9-202ENST00000532602 ZIC2O95409 532 aaPredicted RBP13.37□□□□□ -0.27
PCDHA9-202ENST00000532602 EPHA8P29322 1005 aaPredicted RBP13.37□□□□□ -0.27
PCDHA9-202ENST00000532602 CSN1S1P47710 185 aa13.37□□□□□ -0.27
PCDHA9-202ENST00000532602 UBE2G2P60604 165 aa13.37□□□□□ -0.27
PCDHA9-202ENST00000532602 UBE2KP61086 200 aa13.37□□□□□ -0.27
PCDHA9-202ENST00000532602 IL34Q6ZMJ4 242 aa13.37□□□□□ -0.27
PCDHA9-202ENST00000532602 PRSS45Q7RTY3 260 aa13.37□□□□□ -0.27
PCDHA9-202ENST00000532602 NRARPQ7Z6K4 114 aa13.37□□□□□ -0.27
PCDHA9-202ENST00000532602 EDARADDQ8WWZ3 215 aa13.37□□□□□ -0.27
PCDHA9-202ENST00000532602 BSCL2Q96G97 398 aaPredicted RBP13.37□□□□□ -0.27
PCDHA9-202ENST00000532602 RNF167Q9H6Y7 350 aa13.37□□□□□ -0.27
PCDHA9-202ENST00000532602 DLL4Q9NR61 685 aa13.37□□□□□ -0.27
PCDHA9-202ENST00000532602 EBPQ15125 230 aaKnown RBP13.37□□□□□ -0.27
PCDHA9-202ENST00000532602 WIPI1Q5MNZ9 446 aaPredicted RBP13.37□□□□□ -0.27
PCDHA9-202ENST00000532602 CDC20BQ86Y33 519 aa13.37□□□□□ -0.27
PCDHA9-202ENST00000532602 RDH5Q92781 318 aa13.37□□□□□ -0.27
PCDHA9-202ENST00000532602 REEP6Q96HR9 211 aa13.37□□□□□ -0.27
PCDHA9-202ENST00000532602 TINAGL1Q9GZM7 467 aaPredicted RBP13.37□□□□□ -0.27
PCDHA9-202ENST00000532602 SBF2Q86WG5 1849 aa13.36□□□□□ -0.27
PCDHA9-202ENST00000532602 SIRPB1O00241 398 aa13.36□□□□□ -0.27
PCDHA9-202ENST00000532602 ZNF793Q6ZN11 406 aa13.36□□□□□ -0.27
PCDHA9-202ENST00000532602 FBXL14Q8N1E6 418 aa13.36□□□□□ -0.27
PCDHA9-202ENST00000532602 SPACA5Q96QH8 159 aa13.36□□□□□ -0.27
PCDHA9-202ENST00000532602 ST8SIA3O43173 380 aa13.36□□□□□ -0.27
PCDHA9-202ENST00000532602 HNRNPFP52597 415 aaKnown RBP13.36□□□□□ -0.27
PCDHA9-202ENST00000532602 SNTB1Q13884 538 aaKnown RBP13.36□□□□□ -0.27
PCDHA9-202ENST00000532602 CREB3L2Q70SY1 520 aa13.36□□□□□ -0.27
PCDHA9-202ENST00000532602 C3orf49Q96BT1 292 aa13.36□□□□□ -0.27
PCDHA9-202ENST00000532602 TECTBQ96PL2 329 aa13.36□□□□□ -0.27
PCDHA9-202ENST00000532602 FBXL4Q9UKA2 621 aa13.36□□□□□ -0.27
PCDHA9-202ENST00000532602 R4GMQ9 66 aa13.36□□□□□ -0.27
PCDHA9-202ENST00000532602 IGHV1OR21-1A0A087WYE8 117 aa13.36□□□□□ -0.27
PCDHA9-202ENST00000532602 RELAQ04206 551 aa13.36□□□□□ -0.27
PCDHA9-202ENST00000532602 TMEM211Q6ICI0 200 aa13.36□□□□□ -0.27
PCDHA9-202ENST00000532602 JMJD6Q6NYC1 403 aaPredicted RBP13.36□□□□□ -0.27
PCDHA9-202ENST00000532602 OR2AK2Q8NG84 335 aa13.36□□□□□ -0.27
PCDHA9-202ENST00000532602 APOBEC3DQ96AK3 386 aaPredicted RBP13.36□□□□□ -0.27
PCDHA9-202ENST00000532602 VN1R1Q9GZP7 353 aa13.36□□□□□ -0.27
PCDHA9-202ENST00000532602 ZNF71Q9NQZ8 489 aaPredicted RBP13.36□□□□□ -0.27
PCDHA9-202ENST00000532602 TNFSF14O43557 240 aa13.36□□□□□ -0.27
PCDHA9-202ENST00000532602 CRYZL1O95825 349 aa13.36□□□□□ -0.27
PCDHA9-202ENST00000532602 HOXC4P09017 264 aaPredicted RBP13.36□□□□□ -0.27
PCDHA9-202ENST00000532602 HOXC8P31273 242 aa13.36□□□□□ -0.27
PCDHA9-202ENST00000532602 CTU2Q2VPK5 515 aaKnown RBP13.36□□□□□ -0.27
PCDHA9-202ENST00000532602 ELFN2Q5R3F8 820 aa13.36□□□□□ -0.27
PCDHA9-202ENST00000532602 RNPS1Q15287 305 aaKnown RBP13.36□□□□□ -0.27
PCDHA9-202ENST00000532602 SSX2Q16385 188 aa13.36□□□□□ -0.27
PCDHA9-202ENST00000532602 SVBPQ8N300 66 aa13.36□□□□□ -0.27
PCDHA9-202ENST00000532602 TMEM217Q8N7C4 229 aa13.36□□□□□ -0.27
PCDHA9-202ENST00000532602 SLC25A19Q9HC21 320 aa13.36□□□□□ -0.27
PCDHA9-202ENST00000532602 ATG2BQ96BY7 2078 aa13.35□□□□□ -0.27
PCDHA9-202ENST00000532602 B4GALT1P15291 398 aa13.35□□□□□ -0.27
PCDHA9-202ENST00000532602 SSTR2P30874 369 aa13.35□□□□□ -0.27
PCDHA9-202ENST00000532602 NKX2-1P43699 371 aaPredicted RBP13.35□□□□□ -0.27
PCDHA9-202ENST00000532602 OR13C5Q8NGS8 318 aa13.35□□□□□ -0.27
PCDHA9-202ENST00000532602 RNF141Q8WVD5 230 aa13.35□□□□□ -0.27
PCDHA9-202ENST00000532602 COMMD5Q9GZQ3 224 aa13.35□□□□□ -0.27
PCDHA9-202ENST00000532602 A0A1W2PR80 420 aa13.35□□□□□ -0.27
PCDHA9-202ENST00000532602 OR2A25A4D2G3 310 aa13.35□□□□□ -0.27
PCDHA9-202ENST00000532602 ARRDC5A6NEK1 342 aa13.35□□□□□ -0.27
PCDHA9-202ENST00000532602 PCSK6P29122 969 aa13.35□□□□□ -0.27
PCDHA9-202ENST00000532602 GABRG3Q99928 467 aa13.35□□□□□ -0.27
PCDHA9-202ENST00000532602 OCIAD1Q9NX40 245 aa13.35□□□□□ -0.27
PCDHA9-202ENST00000532602 NXPH1P58417 271 aa13.35□□□□□ -0.27
PCDHA9-202ENST00000532602 SPATA46Q5T0L3 261 aa13.35□□□□□ -0.27
PCDHA9-202ENST00000532602 OR10G3Q8NGC4 313 aa13.35□□□□□ -0.27
PCDHA9-202ENST00000532602 GNRHR2Q96P88 292 aa13.35□□□□□ -0.27
PCDHA9-202ENST00000532602 GABARAPL1Q9H0R8 117 aa13.35□□□□□ -0.27
PCDHA9-202ENST00000532602 FITM1A5D6W6 292 aa13.35□□□□□ -0.27
PCDHA9-202ENST00000532602 HYAL3O43820 417 aaPredicted RBP13.35□□□□□ -0.27
PCDHA9-202ENST00000532602 DDOSTP39656 456 aa13.35□□□□□ -0.27
PCDHA9-202ENST00000532602 PSMB3P49720 205 aa13.35□□□□□ -0.27
PCDHA9-202ENST00000532602 TMEM179BQ7Z7N9 219 aa13.35□□□□□ -0.27
PCDHA9-202ENST00000532602 SMRP1Q8NCR6 262 aa13.35□□□□□ -0.27
PCDHA9-202ENST00000532602 PRDM7Q9NQW5 492 aa13.35□□□□□ -0.27
PCDHA9-202ENST00000532602 ARID1BQ8NFD5 2236 aaPredicted RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms