RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 RADILQ96JH8 1075 aa5.58□□□□□ -1.52
CSDE1-213ENST00000530784 RAB3IPQ96QF0 476 aaPredicted RBP5.58□□□□□ -1.52
CSDE1-213ENST00000530784 OR5B2Q96R09 309 aa5.58□□□□□ -1.52
CSDE1-213ENST00000530784 TUBB1Q9H4B7 451 aa5.58□□□□□ -1.52
CSDE1-213ENST00000530784 EMC3Q9P0I2 261 aa5.58□□□□□ -1.52
CSDE1-213ENST00000530784 ATP6V1HQ9UI12 483 aa5.58□□□□□ -1.52
CSDE1-213ENST00000530784 DNAJC15Q9Y5T4 150 aa5.58□□□□□ -1.52
CSDE1-213ENST00000530784 HIVEP2P31629 2446 aa5.57□□□□□ -1.52
CSDE1-213ENST00000530784 FBN1P35555 2871 aaKnown RBP5.57□□□□□ -1.52
CSDE1-213ENST00000530784 IGHV4-30-2A0A087WSY4 118 aa5.57□□□□□ -1.52
CSDE1-213ENST00000530784 A0A1W2PPK0 400 aa5.57□□□□□ -1.52
CSDE1-213ENST00000530784 SERINC4A6NH21 518 aa5.57□□□□□ -1.52
CSDE1-213ENST00000530784 OR5H1A6NKK0 313 aa5.57□□□□□ -1.52
CSDE1-213ENST00000530784 SMIM23A6NLE4 172 aa5.57□□□□□ -1.52
CSDE1-213ENST00000530784 ZNF724A8MTY0 619 aa5.57□□□□□ -1.52
CSDE1-213ENST00000530784 EPM2AB3EWF7 344 aa5.57□□□□□ -1.52
CSDE1-213ENST00000530784 SHISA9B4DS77 424 aa5.57□□□□□ -1.52
CSDE1-213ENST00000530784 C9JVG2 144 aa5.57□□□□□ -1.52
CSDE1-213ENST00000530784 NPIPB9F8W1W9 429 aa5.57□□□□□ -1.52
CSDE1-213ENST00000530784 GPRIN2O60269 458 aa5.57□□□□□ -1.52
CSDE1-213ENST00000530784 SNX3O60493 162 aa5.57□□□□□ -1.52
CSDE1-213ENST00000530784 EIF4E2O60573 245 aaKnown RBP5.57□□□□□ -1.52
CSDE1-213ENST00000530784 RAD51DO75771 328 aa5.57□□□□□ -1.52
CSDE1-213ENST00000530784 H6PDO95479 791 aa5.57□□□□□ -1.52
CSDE1-213ENST00000530784 C6orf47O95873 294 aa5.57□□□□□ -1.52
CSDE1-213ENST00000530784 CD8AP01732 235 aa5.57□□□□□ -1.52
CSDE1-213ENST00000530784 LAMP1P11279 417 aa5.57□□□□□ -1.52
CSDE1-213ENST00000530784 ACADSP16219 412 aa5.57□□□□□ -1.52
CSDE1-213ENST00000530784 PTNP21246 168 aa5.57□□□□□ -1.52
CSDE1-213ENST00000530784 IGHV1-2P23083 117 aa5.57□□□□□ -1.52
CSDE1-213ENST00000530784 EDNRAP25101 427 aa5.57□□□□□ -1.52
CSDE1-213ENST00000530784 SOAT1P35610 550 aa5.57□□□□□ -1.52
CSDE1-213ENST00000530784 CCT3P49368 545 aaKnown RBP5.57□□□□□ -1.52
CSDE1-213ENST00000530784 SKP2Q13309 424 aa5.57□□□□□ -1.52
CSDE1-213ENST00000530784 PDZK1Q5T2W1 519 aa5.57□□□□□ -1.52
CSDE1-213ENST00000530784 C6orf52Q5T4I8 152 aa5.57□□□□□ -1.52
CSDE1-213ENST00000530784 OR4A47Q6IF82 309 aa5.57□□□□□ -1.52
CSDE1-213ENST00000530784 CLEC2AQ6UVW9 174 aa5.57□□□□□ -1.52
CSDE1-213ENST00000530784 P2RY8Q86VZ1 359 aa5.57□□□□□ -1.52
CSDE1-213ENST00000530784 C10orf107Q8IVU9 208 aa5.57□□□□□ -1.52
CSDE1-213ENST00000530784 C4orf33Q8N1A6 199 aa5.57□□□□□ -1.52
CSDE1-213ENST00000530784 UBE2J2Q8N2K1 259 aa5.57□□□□□ -1.52
CSDE1-213ENST00000530784 NATD1Q8N6N6 113 aa5.57□□□□□ -1.52
CSDE1-213ENST00000530784 KLHDC1Q8N7A1 406 aa5.57□□□□□ -1.52
CSDE1-213ENST00000530784 NUP37Q8NFH4 326 aa5.57□□□□□ -1.52
CSDE1-213ENST00000530784 OR7A2PQ8NGA2 310 aa5.57□□□□□ -1.52
CSDE1-213ENST00000530784 OR5AK3PQ8NH89 298 aa5.57□□□□□ -1.52
CSDE1-213ENST00000530784 PSMA8Q8TAA3 256 aa5.57□□□□□ -1.52
CSDE1-213ENST00000530784 SFXN5Q8TD22 340 aa5.57□□□□□ -1.52
CSDE1-213ENST00000530784 TWIST2Q8WVJ9 160 aa5.57□□□□□ -1.52
CSDE1-213ENST00000530784 TMEM234Q8WY98 164 aa5.57□□□□□ -1.52
CSDE1-213ENST00000530784 ST8SIA1Q92185 356 aa5.57□□□□□ -1.52
CSDE1-213ENST00000530784 PROX1Q92786 737 aa5.57□□□□□ -1.52
CSDE1-213ENST00000530784 ZHX1-C8orf76Q96EF9 292 aa5.57□□□□□ -1.52
CSDE1-213ENST00000530784 PPP3R2Q96LZ3 170 aa5.57□□□□□ -1.52
CSDE1-213ENST00000530784 OR7D2Q96RA2 312 aa5.57□□□□□ -1.52
CSDE1-213ENST00000530784 CACNG6Q9BXT2 260 aa5.57□□□□□ -1.52
CSDE1-213ENST00000530784 CBLN4Q9NTU7 201 aa5.57□□□□□ -1.52
CSDE1-213ENST00000530784 MGAT4BQ9UQ53 548 aa5.57□□□□□ -1.52
CSDE1-213ENST00000530784 KCNE3Q9Y6H6 103 aa5.57□□□□□ -1.52
CSDE1-213ENST00000530784 MPDZO75970 2070 aa5.56□□□□□ -1.52
CSDE1-213ENST00000530784 GOLGA8QA0A0J9YX86 632 aa5.56□□□□□ -1.52
CSDE1-213ENST00000530784 CIB4A0PJX0 185 aa5.56□□□□□ -1.52
CSDE1-213ENST00000530784 GOLGA8OA6NCC3 632 aa5.56□□□□□ -1.52
CSDE1-213ENST00000530784 CCT8L1PA6NM43 557 aa5.56□□□□□ -1.52
CSDE1-213ENST00000530784 GOLGA8NF8WBI6 632 aa5.56□□□□□ -1.52
CSDE1-213ENST00000530784 H7C417 338 aa5.56□□□□□ -1.52
CSDE1-213ENST00000530784 M0R1B8 84 aa5.56□□□□□ -1.52
CSDE1-213ENST00000530784 SULT2B1O00204 365 aa5.56□□□□□ -1.52
CSDE1-213ENST00000530784 CFLARO15519 480 aa5.56□□□□□ -1.52
CSDE1-213ENST00000530784 PHF1O43189 567 aaPredicted RBP5.56□□□□□ -1.52
CSDE1-213ENST00000530784 PEX11AO75192 247 aa5.56□□□□□ -1.52
CSDE1-213ENST00000530784 LYPLA1O75608 230 aaPredicted RBP5.56□□□□□ -1.52
CSDE1-213ENST00000530784 AK1P00568 194 aa5.56□□□□□ -1.52
CSDE1-213ENST00000530784 CSTAP01040 98 aa5.56□□□□□ -1.52
CSDE1-213ENST00000530784 SHBGP04278 402 aa5.56□□□□□ -1.52
CSDE1-213ENST00000530784 CHRNGP07510 517 aa5.56□□□□□ -1.52
CSDE1-213ENST00000530784 FGF4P08620 206 aa5.56□□□□□ -1.52
CSDE1-213ENST00000530784 SLC25A16P16260 332 aa5.56□□□□□ -1.52
CSDE1-213ENST00000530784 PGCP20142 388 aa5.56□□□□□ -1.52
CSDE1-213ENST00000530784 PRPS1L1P21108 318 aa5.56□□□□□ -1.52
CSDE1-213ENST00000530784 PTAFRP25105 342 aa5.56□□□□□ -1.52
CSDE1-213ENST00000530784 ZNF83P51522 516 aa5.56□□□□□ -1.52
CSDE1-213ENST00000530784 DLK1P80370 383 aa5.56□□□□□ -1.52
CSDE1-213ENST00000530784 VLDLRP98155 873 aa5.56□□□□□ -1.52
CSDE1-213ENST00000530784 MERTKQ12866 999 aa5.56□□□□□ -1.52
CSDE1-213ENST00000530784 CAMK2DQ13557 499 aa5.56□□□□□ -1.52
CSDE1-213ENST00000530784 TMEM249Q2WGJ8 235 aa5.56□□□□□ -1.52
CSDE1-213ENST00000530784 MOGAT2Q3SYC2 334 aa5.56□□□□□ -1.52
CSDE1-213ENST00000530784 ATP6AP1LQ52LC2 224 aa5.56□□□□□ -1.52
CSDE1-213ENST00000530784 XKR7Q5GH72 579 aa5.56□□□□□ -1.52
CSDE1-213ENST00000530784 TCTEX1D4Q5JR98 221 aa5.56□□□□□ -1.52
CSDE1-213ENST00000530784 FBXW9Q5XUX1 488 aa5.56□□□□□ -1.52
CSDE1-213ENST00000530784 TMPPEQ6ZT21 453 aa5.56□□□□□ -1.52
CSDE1-213ENST00000530784 CATSPERDQ86XM0 798 aa5.56□□□□□ -1.52
CSDE1-213ENST00000530784 MUC15Q8N387 334 aa5.56□□□□□ -1.52
CSDE1-213ENST00000530784 ZNF433Q8N7K0 673 aaPredicted RBP5.56□□□□□ -1.52
CSDE1-213ENST00000530784 FNDC5Q8NAU1 212 aa5.56□□□□□ -1.52
CSDE1-213ENST00000530784 Q8NBF4 154 aa5.56□□□□□ -1.52
CSDE1-213ENST00000530784 OR5D16Q8NGK9 328 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms