RNA–Protein interactions for RNA: ENST00000530008.1

CAPRIN1-208, Transcript of cell cycle associated protein 1, humanhuman

TSL 4

Gene CAPRIN1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-208ENST00000530008 HDHD3Q9BSH5 251 aaPredicted RBP4.39□□□□□ -1.71
CAPRIN1-208ENST00000530008 REEP1Q9H902 201 aa4.39□□□□□ -1.71
CAPRIN1-208ENST00000530008 EDA2RQ9HAV5 297 aa4.39□□□□□ -1.71
CAPRIN1-208ENST00000530008 UBIAD1Q9Y5Z9 338 aa4.39□□□□□ -1.71
CAPRIN1-208ENST00000530008 EIF4G1Q04637 1599 aaKnown RBP4.39□□□□□ -1.71
CAPRIN1-208ENST00000530008 JCADQ9P266 1359 aa4.39□□□□□ -1.71
CAPRIN1-208ENST00000530008 PRMT5O14744 637 aaPredicted RBP4.38□□□□□ -1.71
CAPRIN1-208ENST00000530008 CD5LO43866 347 aa4.38□□□□□ -1.71
CAPRIN1-208ENST00000530008 SS18L1O75177 396 aaPredicted RBP4.38□□□□□ -1.71
CAPRIN1-208ENST00000530008 ZNF17P17021 662 aa4.38□□□□□ -1.71
CAPRIN1-208ENST00000530008 RAB3AP20336 220 aa4.38□□□□□ -1.71
CAPRIN1-208ENST00000530008 BGNP21810 368 aa4.38□□□□□ -1.71
CAPRIN1-208ENST00000530008 CCNE1P24864 410 aa4.38□□□□□ -1.71
CAPRIN1-208ENST00000530008 PPICP45877 212 aa4.38□□□□□ -1.71
CAPRIN1-208ENST00000530008 SIGLEC14Q08ET2 396 aa4.38□□□□□ -1.71
CAPRIN1-208ENST00000530008 CAPRIN1Q14444 709 aaKnown RBP4.38□□□□□ -1.71
CAPRIN1-208ENST00000530008 KIR2DS1Q14954 304 aa4.38□□□□□ -1.71
CAPRIN1-208ENST00000530008 ZNF79Q15937 498 aa4.38□□□□□ -1.71
CAPRIN1-208ENST00000530008 NDUFAF6Q330K2 333 aa4.38□□□□□ -1.71
CAPRIN1-208ENST00000530008 METTL21CQ5VZV1 264 aa4.38□□□□□ -1.71
CAPRIN1-208ENST00000530008 DUPD1Q68J44 220 aa4.38□□□□□ -1.71
CAPRIN1-208ENST00000530008 NCCRP1Q6ZVX7 275 aaPredicted RBP4.38□□□□□ -1.71
CAPRIN1-208ENST00000530008 COPS6Q7L5N1 327 aa4.38□□□□□ -1.71
CAPRIN1-208ENST00000530008 OR4D6Q8NGJ1 314 aa4.38□□□□□ -1.71
CAPRIN1-208ENST00000530008 OR10G4Q8NGN3 311 aa4.38□□□□□ -1.71
CAPRIN1-208ENST00000530008 SYT4Q9H2B2 425 aa4.38□□□□□ -1.71
CAPRIN1-208ENST00000530008 VCX3AQ9NNX9 186 aa4.38□□□□□ -1.71
CAPRIN1-208ENST00000530008 MED4Q9NPJ6 270 aa4.38□□□□□ -1.71
CAPRIN1-208ENST00000530008 GMEB1Q9Y692 573 aa4.38□□□□□ -1.71
CAPRIN1-208ENST00000530008 IGHV3-74A0A0B4J1X5 117 aa4.37□□□□□ -1.71
CAPRIN1-208ENST00000530008 TRAPPC6AO75865 159 aa4.37□□□□□ -1.71
CAPRIN1-208ENST00000530008 GABARAPO95166 117 aa4.37□□□□□ -1.71
CAPRIN1-208ENST00000530008 GCGP01275 180 aa4.37□□□□□ -1.71
CAPRIN1-208ENST00000530008 GLAP06280 429 aa4.37□□□□□ -1.71
CAPRIN1-208ENST00000530008 ZNF19P17023 458 aa4.37□□□□□ -1.71
CAPRIN1-208ENST00000530008 IGFBP3P17936 291 aaPredicted RBP4.37□□□□□ -1.71
CAPRIN1-208ENST00000530008 KCNJ3P48549 501 aa4.37□□□□□ -1.71
CAPRIN1-208ENST00000530008 HCAR3P49019 387 aa4.37□□□□□ -1.71
CAPRIN1-208ENST00000530008 ZNF136P52737 540 aa4.37□□□□□ -1.71
CAPRIN1-208ENST00000530008 UBE2NP61088 152 aaKnown RBP4.37□□□□□ -1.71
CAPRIN1-208ENST00000530008 GINS1Q14691 196 aa4.37□□□□□ -1.71
CAPRIN1-208ENST00000530008 PON2Q15165 354 aa4.37□□□□□ -1.71
CAPRIN1-208ENST00000530008 APOBEC3HQ6NTF7 200 aaKnown RBP4.37□□□□□ -1.71
CAPRIN1-208ENST00000530008 CD300LGQ6UXG3 332 aa4.37□□□□□ -1.71
CAPRIN1-208ENST00000530008 NDUFAF7Q7L592 441 aa4.37□□□□□ -1.71
CAPRIN1-208ENST00000530008 METTL13Q8N6R0 699 aa4.37□□□□□ -1.71
CAPRIN1-208ENST00000530008 COX18Q8N8Q8 333 aa4.37□□□□□ -1.71
CAPRIN1-208ENST00000530008 LINC01555Q8NAE3 123 aa4.37□□□□□ -1.71
CAPRIN1-208ENST00000530008 OR11H7Q8NGC8 314 aa4.37□□□□□ -1.71
CAPRIN1-208ENST00000530008 BLOC1S5Q8TDH9 187 aa4.37□□□□□ -1.71
CAPRIN1-208ENST00000530008 UTP23Q9BRU9 249 aaKnown RBP4.37□□□□□ -1.71
CAPRIN1-208ENST00000530008 SLIRPQ9GZT3 109 aaKnown RBP4.37□□□□□ -1.71
CAPRIN1-208ENST00000530008 RGS18Q9NS28 235 aa4.37□□□□□ -1.71
CAPRIN1-208ENST00000530008 CES1P1Q9UKY3 287 aa4.37□□□□□ -1.71
CAPRIN1-208ENST00000530008 OR51B2Q9Y5P1 312 aa4.37□□□□□ -1.71
CAPRIN1-208ENST00000530008 A0A0B4J2E0 115 aa4.36□□□□□ -1.71
CAPRIN1-208ENST00000530008 NKX2-6A6NCS4 301 aa4.36□□□□□ -1.71
CAPRIN1-208ENST00000530008 A6NDX4 124 aa4.36□□□□□ -1.71
CAPRIN1-208ENST00000530008 ERI2A8K979 691 aaKnown RBP4.36□□□□□ -1.71
CAPRIN1-208ENST00000530008 DFFAO00273 331 aa4.36□□□□□ -1.71
CAPRIN1-208ENST00000530008 SC5DO75845 299 aa4.36□□□□□ -1.71
CAPRIN1-208ENST00000530008 HLA-DPB1P04440 258 aa4.36□□□□□ -1.71
CAPRIN1-208ENST00000530008 RHOCP08134 193 aa4.36□□□□□ -1.71
CAPRIN1-208ENST00000530008 PRPS2P11908 318 aa4.36□□□□□ -1.71
CAPRIN1-208ENST00000530008 ARL2P36404 184 aa4.36□□□□□ -1.71
CAPRIN1-208ENST00000530008 LHX2P50458 406 aa4.36□□□□□ -1.71
CAPRIN1-208ENST00000530008 UBE2E1P51965 193 aa4.36□□□□□ -1.71
CAPRIN1-208ENST00000530008 OR2B8PP59922 312 aa4.36□□□□□ -1.71
CAPRIN1-208ENST00000530008 RPL18AQ02543 176 aaKnown RBP4.36□□□□□ -1.71
CAPRIN1-208ENST00000530008 PSG3Q16557 428 aa4.36□□□□□ -1.71
CAPRIN1-208ENST00000530008 CPTPQ5TA50 214 aa4.36□□□□□ -1.71
CAPRIN1-208ENST00000530008 ZNF429Q86V71 674 aa4.36□□□□□ -1.71
CAPRIN1-208ENST00000530008 RAB43Q86YS6 212 aa4.36□□□□□ -1.71
CAPRIN1-208ENST00000530008 ZNF584Q8IVC4 421 aa4.36□□□□□ -1.71
CAPRIN1-208ENST00000530008 Q8N9W7 124 aa4.36□□□□□ -1.71
CAPRIN1-208ENST00000530008 OR51A7Q8NH64 312 aa4.36□□□□□ -1.71
CAPRIN1-208ENST00000530008 UBE2E2Q96LR5 201 aa4.36□□□□□ -1.71
CAPRIN1-208ENST00000530008 TAAR1Q96RJ0 339 aa4.36□□□□□ -1.71
CAPRIN1-208ENST00000530008 SPNS1Q9H2V7 528 aa4.36□□□□□ -1.71
CAPRIN1-208ENST00000530008 MYOZ1Q9NP98 299 aaPredicted RBP4.36□□□□□ -1.71
CAPRIN1-208ENST00000530008 FBXO8Q9NRD0 319 aa4.36□□□□□ -1.71
CAPRIN1-208ENST00000530008 CTSFQ9UBX1 484 aa4.36□□□□□ -1.71
CAPRIN1-208ENST00000530008 CACNG2Q9Y698 323 aa4.36□□□□□ -1.71
CAPRIN1-208ENST00000530008 PCDH11XQ9BZA7 1347 aa4.36□□□□□ -1.71
CAPRIN1-208ENST00000530008 A0A0A6YYD5 115 aa4.35□□□□□ -1.71
CAPRIN1-208ENST00000530008 IGHV3OR16-9A0A0B4J2B5 98 aa4.35□□□□□ -1.71
CAPRIN1-208ENST00000530008 OR6C74A6NCV1 312 aa4.35□□□□□ -1.71
CAPRIN1-208ENST00000530008 ZMPSTE24O75844 475 aa4.35□□□□□ -1.71
CAPRIN1-208ENST00000530008 ELK1P19419 428 aa4.35□□□□□ -1.71
CAPRIN1-208ENST00000530008 MYL9P24844 172 aa4.35□□□□□ -1.71
CAPRIN1-208ENST00000530008 ARR3P36575 388 aa4.35□□□□□ -1.71
CAPRIN1-208ENST00000530008 SPAM1P38567 509 aa4.35□□□□□ -1.71
CAPRIN1-208ENST00000530008 MYCNOSP40205 109 aa4.35□□□□□ -1.71
CAPRIN1-208ENST00000530008 UBE2AP49459 152 aa4.35□□□□□ -1.71
CAPRIN1-208ENST00000530008 HCCSP53701 268 aa4.35□□□□□ -1.71
CAPRIN1-208ENST00000530008 WNT4P56705 351 aa4.35□□□□□ -1.71
CAPRIN1-208ENST00000530008 TAS2R60P59551 318 aa4.35□□□□□ -1.71
CAPRIN1-208ENST00000530008 CACNG7P62955 275 aa4.35□□□□□ -1.71
CAPRIN1-208ENST00000530008 USF2Q15853 346 aaPredicted RBP4.35□□□□□ -1.71
CAPRIN1-208ENST00000530008 OR2T5Q6IEZ7 315 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms