RNA–Protein interactions for RNA: ENST00000527817.1

SRPRA-202, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 687 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-202ENST00000527817 SPERTQ8NA61 448 aa10.11□□□□□ -0.79
SRPRA-202ENST00000527817 GJC3Q8NFK1 279 aa10.11□□□□□ -0.79
SRPRA-202ENST00000527817 OR5R1Q8NH85 324 aa10.11□□□□□ -0.79
SRPRA-202ENST00000527817 COQ7Q99807 217 aa10.11□□□□□ -0.79
SRPRA-202ENST00000527817 EBF4Q9BQW3 602 aa10.11□□□□□ -0.79
SRPRA-202ENST00000527817 RABEP2Q9H5N1 569 aa10.11□□□□□ -0.79
SRPRA-202ENST00000527817 FN3KRPQ9HA64 309 aa10.11□□□□□ -0.79
SRPRA-202ENST00000527817 KAAG1Q9UBP8 84 aa10.11□□□□□ -0.79
SRPRA-202ENST00000527817 GRHPRQ9UBQ7 328 aa10.11□□□□□ -0.79
SRPRA-202ENST00000527817 RPUSD1Q9UJJ7 312 aaKnown RBP10.11□□□□□ -0.79
SRPRA-202ENST00000527817 NDUFAF1Q9Y375 327 aa10.11□□□□□ -0.79
SRPRA-202ENST00000527817 ANKRD61A6NGH8 418 aa10.1□□□□□ -0.79
SRPRA-202ENST00000527817 OOEPA6NGQ2 149 aa10.1□□□□□ -0.79
SRPRA-202ENST00000527817 XKRYO14609 159 aa10.1□□□□□ -0.79
SRPRA-202ENST00000527817 DVL1O14640 695 aa10.1□□□□□ -0.79
SRPRA-202ENST00000527817 OR10H3O60404 316 aa10.1□□□□□ -0.79
SRPRA-202ENST00000527817 SHOX2O60902 331 aaPredicted RBP10.1□□□□□ -0.79
SRPRA-202ENST00000527817 KHDRBS3O75525 346 aaKnown RBP10.1□□□□□ -0.79
SRPRA-202ENST00000527817 CD14P08571 375 aa10.1□□□□□ -0.79
SRPRA-202ENST00000527817 OR1E2P47887 323 aa10.1□□□□□ -0.79
SRPRA-202ENST00000527817 SLC9A3P48764 834 aa10.1□□□□□ -0.79
SRPRA-202ENST00000527817 EFNB2P52799 333 aa10.1□□□□□ -0.79
SRPRA-202ENST00000527817 HOXA4Q00056 320 aaPredicted RBP10.1□□□□□ -0.79
SRPRA-202ENST00000527817 GUCA2AQ02747 115 aa10.1□□□□□ -0.79
SRPRA-202ENST00000527817 PRKCDQ05655 676 aa10.1□□□□□ -0.79
SRPRA-202ENST00000527817 GK2Q14410 553 aaPredicted RBP10.1□□□□□ -0.79
SRPRA-202ENST00000527817 OR8B8Q15620 311 aa10.1□□□□□ -0.79
SRPRA-202ENST00000527817 BEND6Q5SZJ8 279 aaPredicted RBP10.1□□□□□ -0.79
SRPRA-202ENST00000527817 PRAMEF6Q5VXH4 476 aa10.1□□□□□ -0.79
SRPRA-202ENST00000527817 VMO1Q7Z5L0 202 aa10.1□□□□□ -0.79
SRPRA-202ENST00000527817 LY6G5BQ8NDX9 201 aa10.1□□□□□ -0.79
SRPRA-202ENST00000527817 SGCDQ92629 289 aa10.1□□□□□ -0.79
SRPRA-202ENST00000527817 Q96M85 177 aa10.1□□□□□ -0.79
SRPRA-202ENST00000527817 SLC22A4Q9H015 551 aa10.1□□□□□ -0.79
SRPRA-202ENST00000527817 HDHD2Q9H0R4 259 aa10.1□□□□□ -0.79
SRPRA-202ENST00000527817 WDR76Q9H967 626 aa10.1□□□□□ -0.79
SRPRA-202ENST00000527817 AURKAIP1Q9NWT8 199 aaPredicted RBP10.1□□□□□ -0.79
SRPRA-202ENST00000527817 NKIRAS1Q9NYS0 192 aa10.1□□□□□ -0.79
SRPRA-202ENST00000527817 COA3Q9Y2R0 106 aaPredicted RBP10.1□□□□□ -0.79
SRPRA-202ENST00000527817 NOP16Q9Y3C1 178 aaKnown RBP10.1□□□□□ -0.79
SRPRA-202ENST00000527817 EFCAB9A8MZ26 197 aa10.09□□□□□ -0.79
SRPRA-202ENST00000527817 GMDSO60547 372 aa10.09□□□□□ -0.79
SRPRA-202ENST00000527817 SLC16A7O60669 478 aa10.09□□□□□ -0.79
SRPRA-202ENST00000527817 LHBP01229 141 aa10.09□□□□□ -0.79
SRPRA-202ENST00000527817 VSIG8P0DPA2 414 aa10.09□□□□□ -0.79
SRPRA-202ENST00000527817 EEF1B2P24534 225 aaKnown RBP10.09□□□□□ -0.79
SRPRA-202ENST00000527817 IFNA8P32881 189 aa10.09□□□□□ -0.79
SRPRA-202ENST00000527817 EMX1Q04741 257 aaPredicted RBP10.09□□□□□ -0.79
SRPRA-202ENST00000527817 OR8G1Q15617 311 aa10.09□□□□□ -0.79
SRPRA-202ENST00000527817 KRTAP27-1Q3LI81 207 aa10.09□□□□□ -0.79
SRPRA-202ENST00000527817 MESTQ5EB52 335 aa10.09□□□□□ -0.79
SRPRA-202ENST00000527817 OTPQ5XKR4 325 aa10.09□□□□□ -0.79
SRPRA-202ENST00000527817 FAM122BQ7Z309 247 aa10.09□□□□□ -0.79
SRPRA-202ENST00000527817 MICU2Q8IYU8 434 aa10.09□□□□□ -0.79
SRPRA-202ENST00000527817 RNF113BQ8IZP6 322 aaKnown RBP10.09□□□□□ -0.79
SRPRA-202ENST00000527817 BOLLQ8N9W6 283 aaKnown RBP10.09□□□□□ -0.79
SRPRA-202ENST00000527817 TSPEARQ8WU66 669 aa10.09□□□□□ -0.79
SRPRA-202ENST00000527817 ZBTB9Q96C00 473 aa10.09□□□□□ -0.79
SRPRA-202ENST00000527817 C7orf26Q96N11 449 aa10.09□□□□□ -0.79
SRPRA-202ENST00000527817 SEMA6AQ9H2E6 1030 aa10.09□□□□□ -0.79
SRPRA-202ENST00000527817 PPA2Q9H2U2 334 aa10.09□□□□□ -0.79
SRPRA-202ENST00000527817 A4GNTQ9UNA3 340 aa10.09□□□□□ -0.79
SRPRA-202ENST00000527817 FOXJ3Q9UPW0 622 aa10.09□□□□□ -0.79
SRPRA-202ENST00000527817 ADAM18Q9Y3Q7 739 aa10.09□□□□□ -0.79
SRPRA-202ENST00000527817 NPFFO15130 113 aa10.08□□□□□ -0.8
SRPRA-202ENST00000527817 IFNA14P01570 189 aa10.08□□□□□ -0.8
SRPRA-202ENST00000527817 GYPAP02724 150 aa10.08□□□□□ -0.8
SRPRA-202ENST00000527817 RPL4P36578 427 aaKnown RBP10.08□□□□□ -0.8
SRPRA-202ENST00000527817 C1orf122Q6ZSJ8 110 aa10.08□□□□□ -0.8
SRPRA-202ENST00000527817 CALHM3Q86XJ0 350 aa10.08□□□□□ -0.8
SRPRA-202ENST00000527817 FAM90A1Q86YD7 464 aa10.08□□□□□ -0.8
SRPRA-202ENST00000527817 NRMQ8IXM6 262 aa10.08□□□□□ -0.8
SRPRA-202ENST00000527817 CMTM4Q8IZR5 234 aa10.08□□□□□ -0.8
SRPRA-202ENST00000527817 C11orf44Q8N8P7 122 aa10.08□□□□□ -0.8
SRPRA-202ENST00000527817 OR4S1Q8NGB4 309 aa10.08□□□□□ -0.8
SRPRA-202ENST00000527817 PPP1R35Q8TAP8 253 aa10.08□□□□□ -0.8
SRPRA-202ENST00000527817 SPRYD4Q8WW59 207 aaPredicted RBP10.08□□□□□ -0.8
SRPRA-202ENST00000527817 SLCO4A1Q96BD0 722 aa10.08□□□□□ -0.8
SRPRA-202ENST00000527817 NMNAT1Q9HAN9 279 aaPredicted RBP10.08□□□□□ -0.8
SRPRA-202ENST00000527817 VSX1Q9NZR4 365 aaPredicted RBP10.08□□□□□ -0.8
SRPRA-202ENST00000527817 SIGLEC9Q9Y336 463 aa10.08□□□□□ -0.8
SRPRA-202ENST00000527817 LHFPL6Q9Y693 200 aa10.08□□□□□ -0.8
SRPRA-202ENST00000527817 ANGPT2O15123 496 aa10.07□□□□□ -0.8
SRPRA-202ENST00000527817 ACSM4P0C7M7 580 aa10.07□□□□□ -0.8
SRPRA-202ENST00000527817 ZNF26P17031 533 aaPredicted RBP10.07□□□□□ -0.8
SRPRA-202ENST00000527817 CA6P23280 308 aa10.07□□□□□ -0.8
SRPRA-202ENST00000527817 DBPQ10586 325 aaPredicted RBP10.07□□□□□ -0.8
SRPRA-202ENST00000527817 MALLQ13021 153 aa10.07□□□□□ -0.8
SRPRA-202ENST00000527817 NFYCQ13952 458 aa10.07□□□□□ -0.8
SRPRA-202ENST00000527817 ZBED5Q49AG3 693 aa10.07□□□□□ -0.8
SRPRA-202ENST00000527817 TEX36Q5VZQ5 186 aa10.07□□□□□ -0.8
SRPRA-202ENST00000527817 GPR139Q6DWJ6 353 aa10.07□□□□□ -0.8
SRPRA-202ENST00000527817 NANOGP8Q6NSW7 305 aa10.07□□□□□ -0.8
SRPRA-202ENST00000527817 PGM2L1Q6PCE3 622 aa10.07□□□□□ -0.8
SRPRA-202ENST00000527817 TMPRSS11FQ6ZWK6 438 aa10.07□□□□□ -0.8
SRPRA-202ENST00000527817 PGAP1Q75T13 922 aa10.07□□□□□ -0.8
SRPRA-202ENST00000527817 GCSAMQ8N6F7 178 aa10.07□□□□□ -0.8
SRPRA-202ENST00000527817 DTX3Q8N9I9 347 aa10.07□□□□□ -0.8
SRPRA-202ENST00000527817 OR13C2Q8NGS9 318 aa10.07□□□□□ -0.8
SRPRA-202ENST00000527817 ST8SIA4Q92187 359 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms