RNA–Protein interactions for RNA: ENST00000523237.1

CLN8-206, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 835 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-206ENST00000523237 TMEM100Q9NV29 134 aa13.68□□□□□ -0.22
CLN8-206ENST00000523237 ARMC1Q9NVT9 282 aa13.68□□□□□ -0.22
CLN8-206ENST00000523237 COMMD3-BMI1R4GMX3 469 aa13.68□□□□□ -0.22
CLN8-206ENST00000523237 STAB1Q9NY15 2570 aa13.68□□□□□ -0.22
CLN8-206ENST00000523237 WNK2Q9Y3S1 2297 aa13.67□□□□□ -0.22
CLN8-206ENST00000523237 LOC105371242A0A075B767 164 aa13.67□□□□□ -0.22
CLN8-206ENST00000523237 A0A0A6YYJ9 748 aa13.67□□□□□ -0.22
CLN8-206ENST00000523237 TMEM178BH3BS89 294 aa13.67□□□□□ -0.22
CLN8-206ENST00000523237 M0R135 149 aa13.67□□□□□ -0.22
CLN8-206ENST00000523237 ACOT8O14734 319 aa13.67□□□□□ -0.22
CLN8-206ENST00000523237 CST1P01037 141 aa13.67□□□□□ -0.22
CLN8-206ENST00000523237 IFNGP01579 166 aa13.67□□□□□ -0.22
CLN8-206ENST00000523237 SLC6A9P48067 706 aa13.67□□□□□ -0.22
CLN8-206ENST00000523237 MMP16P51512 607 aa13.67□□□□□ -0.22
CLN8-206ENST00000523237 SLC25A1P53007 311 aa13.67□□□□□ -0.22
CLN8-206ENST00000523237 CD300LDQ6UXZ3 194 aa13.67□□□□□ -0.22
CLN8-206ENST00000523237 C1orf229Q6ZS94 237 aaPredicted RBP13.67□□□□□ -0.22
CLN8-206ENST00000523237 PGAP1Q75T13 922 aa13.67□□□□□ -0.22
CLN8-206ENST00000523237 DCXRQ7Z4W1 244 aa13.67□□□□□ -0.22
CLN8-206ENST00000523237 LRRC28Q86X40 367 aaPredicted RBP13.67□□□□□ -0.22
CLN8-206ENST00000523237 MUC20Q8N307 709 aaPredicted RBP13.67□□□□□ -0.22
CLN8-206ENST00000523237 OR10S1Q8NGN2 331 aa13.67□□□□□ -0.22
CLN8-206ENST00000523237 OR4Q3Q8NH05 313 aa13.67□□□□□ -0.22
CLN8-206ENST00000523237 TEX47Q8TBZ9 253 aa13.67□□□□□ -0.22
CLN8-206ENST00000523237 ZNRF4Q8WWF5 429 aa13.67□□□□□ -0.22
CLN8-206ENST00000523237 ZNF799Q96GE5 643 aa13.67□□□□□ -0.22
CLN8-206ENST00000523237 PATZ1Q9HBE1 687 aaKnown RBP13.67□□□□□ -0.22
CLN8-206ENST00000523237 DDX28Q9NUL7 540 aaKnown RBP13.67□□□□□ -0.22
CLN8-206ENST00000523237 ARHGAP32A7KAX9 2087 aa13.67□□□□□ -0.22
CLN8-206ENST00000523237 PPIAL4EA0A075B759 164 aa13.66□□□□□ -0.22
CLN8-206ENST00000523237 PPIAL4CA0A0B4J2A2 164 aa13.66□□□□□ -0.22
CLN8-206ENST00000523237 ARRDC5A6NEK1 342 aa13.66□□□□□ -0.22
CLN8-206ENST00000523237 AQP12BA6NM10 295 aa13.66□□□□□ -0.22
CLN8-206ENST00000523237 RIIAD1A6NNX1 92 aa13.66□□□□□ -0.22
CLN8-206ENST00000523237 PPIAL4DF5H284 164 aa13.66□□□□□ -0.22
CLN8-206ENST00000523237 F5H5P2 479 aa13.66□□□□□ -0.22
CLN8-206ENST00000523237 H0YL77 283 aa13.66□□□□□ -0.22
CLN8-206ENST00000523237 MLNRO43193 412 aa13.66□□□□□ -0.22
CLN8-206ENST00000523237 AVPP01185 164 aa13.66□□□□□ -0.22
CLN8-206ENST00000523237 SPARCP09486 303 aa13.66□□□□□ -0.22
CLN8-206ENST00000523237 PPIAL4FP0DN26 164 aa13.66□□□□□ -0.22
CLN8-206ENST00000523237 HOXB6P17509 224 aaKnown RBP13.66□□□□□ -0.22
CLN8-206ENST00000523237 SPI1P17947 270 aa13.66□□□□□ -0.22
CLN8-206ENST00000523237 RBMXP38159 391 aaKnown RBP13.66□□□□□ -0.22
CLN8-206ENST00000523237 MDH2P40926 338 aaKnown RBP13.66□□□□□ -0.22
CLN8-206ENST00000523237 ENTPD1P49961 510 aa13.66□□□□□ -0.22
CLN8-206ENST00000523237 BLVRAP53004 296 aa13.66□□□□□ -0.22
CLN8-206ENST00000523237 ZMYND11Q15326 602 aa13.66□□□□□ -0.22
CLN8-206ENST00000523237 LYPD4Q6UWN0 246 aa13.66□□□□□ -0.22
CLN8-206ENST00000523237 DRAM2Q6UX65 266 aa13.66□□□□□ -0.22
CLN8-206ENST00000523237 TRPM8Q7Z2W7 1104 aa13.66□□□□□ -0.22
CLN8-206ENST00000523237 MRPL21Q7Z2W9 205 aaKnown RBP13.66□□□□□ -0.22
CLN8-206ENST00000523237 C1QL2Q7Z5L3 287 aa13.66□□□□□ -0.22
CLN8-206ENST00000523237 AQP12AQ8IXF9 295 aa13.66□□□□□ -0.22
CLN8-206ENST00000523237 ADGRG5Q8IZF4 528 aa13.66□□□□□ -0.22
CLN8-206ENST00000523237 ZNF420Q8TAQ5 688 aaPredicted RBP13.66□□□□□ -0.22
CLN8-206ENST00000523237 GIPC3Q8TF64 312 aa13.66□□□□□ -0.22
CLN8-206ENST00000523237 SLCO4A1Q96BD0 722 aa13.66□□□□□ -0.22
CLN8-206ENST00000523237 FEVQ99581 238 aa13.66□□□□□ -0.22
CLN8-206ENST00000523237 NIPSNAP1Q9BPW8 284 aa13.66□□□□□ -0.22
CLN8-206ENST00000523237 COPS4Q9BT78 406 aa13.66□□□□□ -0.22
CLN8-206ENST00000523237 NMNAT2Q9BZQ4 307 aa13.66□□□□□ -0.22
CLN8-206ENST00000523237 A0A1B0GWJ7 208 aa13.65□□□□□ -0.22
CLN8-206ENST00000523237 DHRS12A0PJE2 317 aa13.65□□□□□ -0.22
CLN8-206ENST00000523237 H3BN98 237 aa13.65□□□□□ -0.22
CLN8-206ENST00000523237 ZNF593O00488 134 aaPredicted RBP13.65□□□□□ -0.22
CLN8-206ENST00000523237 GNGT2O14610 69 aa13.65□□□□□ -0.22
CLN8-206ENST00000523237 HLA-DPB1P04440 258 aa13.65□□□□□ -0.22
CLN8-206ENST00000523237 GYPBP06028 91 aa13.65□□□□□ -0.22
CLN8-206ENST00000523237 ZNF3P17036 446 aa13.65□□□□□ -0.22
CLN8-206ENST00000523237 EPHA1P21709 976 aa13.65□□□□□ -0.22
CLN8-206ENST00000523237 OTX1P32242 354 aaPredicted RBP13.65□□□□□ -0.22
CLN8-206ENST00000523237 PRSS12P56730 875 aa13.65□□□□□ -0.22
CLN8-206ENST00000523237 TAF13Q15543 124 aa13.65□□□□□ -0.22
CLN8-206ENST00000523237 PCK2Q16822 640 aa13.65□□□□□ -0.22
CLN8-206ENST00000523237 DNAL1Q4LDG9 190 aa13.65□□□□□ -0.22
CLN8-206ENST00000523237 TEX30Q5JUR7 227 aa13.65□□□□□ -0.22
CLN8-206ENST00000523237 C1orf87Q8N0U7 546 aa13.65□□□□□ -0.22
CLN8-206ENST00000523237 ZNF511Q8NB15 262 aa13.65□□□□□ -0.22
CLN8-206ENST00000523237 OR6K6Q8NGW6 343 aa13.65□□□□□ -0.22
CLN8-206ENST00000523237 NANPQ8TBE9 248 aa13.65□□□□□ -0.22
CLN8-206ENST00000523237 BCAS4Q8TDM0 211 aa13.65□□□□□ -0.22
CLN8-206ENST00000523237 ZNF418Q8TF45 676 aaPredicted RBP13.65□□□□□ -0.22
CLN8-206ENST00000523237 CANT1Q8WVQ1 401 aa13.65□□□□□ -0.22
CLN8-206ENST00000523237 SPRYD4Q8WW59 207 aaPredicted RBP13.65□□□□□ -0.22
CLN8-206ENST00000523237 SLAMF6Q96DU3 332 aa13.65□□□□□ -0.22
CLN8-206ENST00000523237 C7orf69Q9H7B7 122 aa13.65□□□□□ -0.22
CLN8-206ENST00000523237 CMC2Q9NRP2 79 aa13.65□□□□□ -0.22
CLN8-206ENST00000523237 NOP16Q9Y3C1 178 aaKnown RBP13.65□□□□□ -0.22
CLN8-206ENST00000523237 LRRC30A6NM36 301 aa13.64□□□□□ -0.23
CLN8-206ENST00000523237 GYG2O15488 501 aa13.64□□□□□ -0.23
CLN8-206ENST00000523237 CLUP10909 449 aa13.64□□□□□ -0.23
CLN8-206ENST00000523237 PSKH1P11801 424 aa13.64□□□□□ -0.23
CLN8-206ENST00000523237 ZFP36P26651 326 aaKnown RBP13.64□□□□□ -0.23
CLN8-206ENST00000523237 RAD23AP54725 363 aa13.64□□□□□ -0.23
CLN8-206ENST00000523237 ZNF181Q2M3W8 571 aa13.64□□□□□ -0.23
CLN8-206ENST00000523237 SNAI3Q3KNW1 292 aa13.64□□□□□ -0.23
CLN8-206ENST00000523237 MOGAT3Q86VF5 341 aa13.64□□□□□ -0.23
CLN8-206ENST00000523237 CELF2-AS1Q8N7Q2 184 aa13.64□□□□□ -0.23
CLN8-206ENST00000523237 SLC22A4Q9H015 551 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms