RNA–Protein interactions for RNA: ENST00000521865.5

PABPC1-218, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-218ENST00000521865 IFT27Q9BW83 186 aa17.41■□□□□ 0.38
PABPC1-218ENST00000521865 MMADHCQ9H3L0 296 aaPredicted RBP17.41■□□□□ 0.38
PABPC1-218ENST00000521865 RPRD1BQ9NQG5 326 aaKnown RBP17.41■□□□□ 0.38
PABPC1-218ENST00000521865 TNFRSF19Q9NS68 423 aa17.41■□□□□ 0.38
PABPC1-218ENST00000521865 UFSP2Q9NUQ7 469 aa17.41■□□□□ 0.38
PABPC1-218ENST00000521865 V9GYQ6 96 aa17.41■□□□□ 0.38
PABPC1-218ENST00000521865 HOXA3O43365 443 aaPredicted RBP17.4■□□□□ 0.38
PABPC1-218ENST00000521865 ACSM4P0C7M7 580 aa17.4■□□□□ 0.38
PABPC1-218ENST00000521865 OMGP23515 440 aa17.4■□□□□ 0.38
PABPC1-218ENST00000521865 RAD23AP54725 363 aa17.4■□□□□ 0.38
PABPC1-218ENST00000521865 DBPQ10586 325 aaPredicted RBP17.4■□□□□ 0.38
PABPC1-218ENST00000521865 ECH1Q13011 328 aa17.4■□□□□ 0.38
PABPC1-218ENST00000521865 GK2Q14410 553 aaPredicted RBP17.4■□□□□ 0.38
PABPC1-218ENST00000521865 RFX4Q33E94 735 aa17.4■□□□□ 0.38
PABPC1-218ENST00000521865 PRAMEF6Q5VXH4 476 aa17.4■□□□□ 0.38
PABPC1-218ENST00000521865 C16orf87Q6PH81 154 aa17.4■□□□□ 0.38
PABPC1-218ENST00000521865 LYPD2Q6UXB3 125 aa17.4■□□□□ 0.38
PABPC1-218ENST00000521865 TREML4Q6UXN2 200 aa17.4■□□□□ 0.38
PABPC1-218ENST00000521865 CFAP77Q6ZQR2 320 aa17.4■□□□□ 0.38
PABPC1-218ENST00000521865 DCDC5Q6ZRR9 648 aa17.4■□□□□ 0.38
PABPC1-218ENST00000521865 PGAP1Q75T13 922 aa17.4■□□□□ 0.38
PABPC1-218ENST00000521865 FAM86B1Q8N7N1 296 aa17.4■□□□□ 0.38
PABPC1-218ENST00000521865 SLC26A10Q8NG04 563 aa17.4■□□□□ 0.38
PABPC1-218ENST00000521865 TMIGD2Q96BF3 282 aa17.4■□□□□ 0.38
PABPC1-218ENST00000521865 C7orf34Q96L11 122 aa17.4■□□□□ 0.38
PABPC1-218ENST00000521865 ATF6BQ99941 703 aa17.4■□□□□ 0.38
PABPC1-218ENST00000521865 NSRP1Q9H0G5 558 aaKnown RBP17.4■□□□□ 0.38
PABPC1-218ENST00000521865 OR52D1Q9H346 318 aa17.4■□□□□ 0.38
PABPC1-218ENST00000521865 PHYHO14832 338 aa17.39■□□□□ 0.37
PABPC1-218ENST00000521865 HIST1H1CP16403 213 aaKnown RBP17.39■□□□□ 0.37
PABPC1-218ENST00000521865 MDKP21741 143 aaPredicted RBP17.39■□□□□ 0.37
PABPC1-218ENST00000521865 SMIM11AP58511 58 aa17.39■□□□□ 0.37
PABPC1-218ENST00000521865 FGF12P61328 243 aa17.39■□□□□ 0.37
PABPC1-218ENST00000521865 SPIBQ01892 262 aa17.39■□□□□ 0.37
PABPC1-218ENST00000521865 TRAP1Q12931 704 aaKnown RBP17.39■□□□□ 0.37
PABPC1-218ENST00000521865 MAB21L1Q13394 359 aa17.39■□□□□ 0.37
PABPC1-218ENST00000521865 RSPO1Q2MKA7 263 aaPredicted RBP17.39■□□□□ 0.37
PABPC1-218ENST00000521865 DEFB112Q30KQ8 113 aa17.39■□□□□ 0.37
PABPC1-218ENST00000521865 GPR157Q5UAW9 335 aa17.39■□□□□ 0.37
PABPC1-218ENST00000521865 WDR25Q64LD2 544 aaPredicted RBP17.39■□□□□ 0.37
PABPC1-218ENST00000521865 SLC18B1Q6NT16 456 aa17.39■□□□□ 0.37
PABPC1-218ENST00000521865 COLCA1Q6ZS62 124 aa17.39■□□□□ 0.37
PABPC1-218ENST00000521865 MRPL21Q7Z2W9 205 aaKnown RBP17.39■□□□□ 0.37
PABPC1-218ENST00000521865 FITM2Q8N6M3 262 aa17.39■□□□□ 0.37
PABPC1-218ENST00000521865 BOLLQ8N9W6 283 aaKnown RBP17.39■□□□□ 0.37
PABPC1-218ENST00000521865 ERGIC1Q969X5 290 aa17.39■□□□□ 0.37
PABPC1-218ENST00000521865 TECTBQ96PL2 329 aa17.39■□□□□ 0.37
PABPC1-218ENST00000521865 SPAG4Q9NPE6 437 aa17.39■□□□□ 0.37
PABPC1-218ENST00000521865 DCAF13Q9NV06 445 aaKnown RBP17.39■□□□□ 0.37
PABPC1-218ENST00000521865 ADA2Q9NZK5 511 aa17.39■□□□□ 0.37
PABPC1-218ENST00000521865 ABCD2Q9UBJ2 740 aa17.39■□□□□ 0.37
PABPC1-218ENST00000521865 OR10H3O60404 316 aa17.38■□□□□ 0.37
PABPC1-218ENST00000521865 FAM20BO75063 409 aa17.38■□□□□ 0.37
PABPC1-218ENST00000521865 GADD45GO95257 159 aa17.38■□□□□ 0.37
PABPC1-218ENST00000521865 FSTL3O95633 263 aa17.38■□□□□ 0.37
PABPC1-218ENST00000521865 GATA4P43694 442 aa17.38■□□□□ 0.37
PABPC1-218ENST00000521865 TPTEP56180 551 aa17.38■□□□□ 0.37
PABPC1-218ENST00000521865 OR8G1Q15617 311 aa17.38■□□□□ 0.37
PABPC1-218ENST00000521865 NAA40Q86UY6 237 aa17.38■□□□□ 0.37
PABPC1-218ENST00000521865 RNF148Q8N7C7 305 aa17.38■□□□□ 0.37
PABPC1-218ENST00000521865 CELF2-AS1Q8N7Q2 184 aa17.38■□□□□ 0.37
PABPC1-218ENST00000521865 SDR9C7Q8NEX9 313 aa17.38■□□□□ 0.37
PABPC1-218ENST00000521865 DACT3Q96B18 629 aaPredicted RBP17.38■□□□□ 0.37
PABPC1-218ENST00000521865 PCGF1Q9BSM1 259 aa17.38■□□□□ 0.37
PABPC1-218ENST00000521865 FN3KQ9H479 309 aa17.38■□□□□ 0.37
PABPC1-218ENST00000521865 CCDC134Q9H6E4 229 aa17.38■□□□□ 0.37
PABPC1-218ENST00000521865 KIF17Q9P2E2 1029 aa17.38■□□□□ 0.37
PABPC1-218ENST00000521865 TMCC3Q9ULS5 477 aa17.38■□□□□ 0.37
PABPC1-218ENST00000521865 ARPC3O15145 178 aa17.37■□□□□ 0.37
PABPC1-218ENST00000521865 ENSAO43768 121 aaKnown RBP17.37■□□□□ 0.37
PABPC1-218ENST00000521865 CRYBA1P05813 215 aa17.37■□□□□ 0.37
PABPC1-218ENST00000521865 CA6P23280 308 aa17.37■□□□□ 0.37
PABPC1-218ENST00000521865 CD200P41217 278 aa17.37■□□□□ 0.37
PABPC1-218ENST00000521865 Q8TCH9 128 aa17.37■□□□□ 0.37
PABPC1-218ENST00000521865 CMTM5Q96DZ9 223 aa17.37■□□□□ 0.37
PABPC1-218ENST00000521865 DHRS1Q96LJ7 313 aa17.37■□□□□ 0.37
PABPC1-218ENST00000521865 FN3KRPQ9HA64 309 aa17.37■□□□□ 0.37
PABPC1-218ENST00000521865 CYB5R1Q9UHQ9 305 aa17.37■□□□□ 0.37
PABPC1-218ENST00000521865 NOP16Q9Y3C1 178 aaKnown RBP17.37■□□□□ 0.37
PABPC1-218ENST00000521865 A0A1B0GWJ7 208 aa17.36■□□□□ 0.37
PABPC1-218ENST00000521865 M0R135 149 aa17.36■□□□□ 0.37
PABPC1-218ENST00000521865 ZNF823P16415 610 aa17.36■□□□□ 0.37
PABPC1-218ENST00000521865 GGT2P36268 569 aa17.36■□□□□ 0.37
PABPC1-218ENST00000521865 IFNGR2P38484 337 aa17.36■□□□□ 0.37
PABPC1-218ENST00000521865 MPPED2Q15777 294 aa17.36■□□□□ 0.37
PABPC1-218ENST00000521865 KCNJ8Q15842 424 aa17.36■□□□□ 0.37
PABPC1-218ENST00000521865 KRTAP27-1Q3LI81 207 aa17.36■□□□□ 0.37
PABPC1-218ENST00000521865 HSP90B2PQ58FF3 399 aa17.36■□□□□ 0.37
PABPC1-218ENST00000521865 SLC35F1Q5T1Q4 408 aa17.36■□□□□ 0.37
PABPC1-218ENST00000521865 SFRP4Q6FHJ7 346 aaPredicted RBP17.36■□□□□ 0.37
PABPC1-218ENST00000521865 SPTSSAQ969W0 71 aa17.36■□□□□ 0.37
PABPC1-218ENST00000521865 MCUR1Q96AQ8 359 aa17.36■□□□□ 0.37
PABPC1-218ENST00000521865 ZNF799Q96GE5 643 aa17.36■□□□□ 0.37
PABPC1-218ENST00000521865 ADAT1Q9BUB4 502 aaKnown RBP17.36■□□□□ 0.37
PABPC1-218ENST00000521865 SLC22A4Q9H015 551 aa17.36■□□□□ 0.37
PABPC1-218ENST00000521865 SLITRK2Q9H156 845 aa17.36■□□□□ 0.37
PABPC1-218ENST00000521865 ERVK-18Q9QC07 812 aa17.36■□□□□ 0.37
PABPC1-218ENST00000521865 RNF7Q9UBF6 113 aa17.36■□□□□ 0.37
PABPC1-218ENST00000521865 OR6C68A6NDL8 312 aa17.35■□□□□ 0.37
PABPC1-218ENST00000521865 FAM181BA6NEQ2 426 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms