RNA–Protein interactions for RNA: ENST00000520337.1

CTHRC1-203, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 1 (best) BASIC

Gene CTHRC1, Length 1,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-203ENST00000520337 UFD1Q92890 307 aa6.88□□□□□ -1.31
CTHRC1-203ENST00000520337 NINJ1Q92982 152 aa6.88□□□□□ -1.31
CTHRC1-203ENST00000520337 MRPL48Q96GC5 212 aaKnown RBP6.88□□□□□ -1.31
CTHRC1-203ENST00000520337 PGLYRP3Q96LB9 341 aa6.88□□□□□ -1.31
CTHRC1-203ENST00000520337 CHCHD6Q9BRQ6 235 aa6.88□□□□□ -1.31
CTHRC1-203ENST00000520337 CENPOQ9BU64 300 aa6.88□□□□□ -1.31
CTHRC1-203ENST00000520337 RBM24Q9BX46 236 aaKnown RBP6.88□□□□□ -1.31
CTHRC1-203ENST00000520337 ULBP2Q9BZM5 246 aa6.88□□□□□ -1.31
CTHRC1-203ENST00000520337 DCSTAMPQ9H295 470 aa6.88□□□□□ -1.31
CTHRC1-203ENST00000520337 NELFAQ9H3P2 528 aa6.88□□□□□ -1.31
CTHRC1-203ENST00000520337 RNF167Q9H6Y7 350 aa6.88□□□□□ -1.31
CTHRC1-203ENST00000520337 SEC61A2Q9H9S3 476 aa6.88□□□□□ -1.31
CTHRC1-203ENST00000520337 ELOVL3Q9HB03 270 aa6.88□□□□□ -1.31
CTHRC1-203ENST00000520337 CRLF2Q9HC73 371 aa6.88□□□□□ -1.31
CTHRC1-203ENST00000520337 TRIM36Q9NQ86 728 aa6.88□□□□□ -1.31
CTHRC1-203ENST00000520337 SLC7A10Q9NS82 523 aa6.88□□□□□ -1.31
CTHRC1-203ENST00000520337 ACOXLQ9NUZ1 547 aa6.88□□□□□ -1.31
CTHRC1-203ENST00000520337 TMEM38BQ9NVV0 291 aa6.88□□□□□ -1.31
CTHRC1-203ENST00000520337 PARPBPQ9NWS1 579 aa6.88□□□□□ -1.31
CTHRC1-203ENST00000520337 GNG8Q9UK08 70 aa6.88□□□□□ -1.31
CTHRC1-203ENST00000520337 GRIP1Q9Y3R0 1128 aa6.88□□□□□ -1.31
CTHRC1-203ENST00000520337 HEATR1Q9H583 2144 aaKnown RBP6.88□□□□□ -1.31
CTHRC1-203ENST00000520337 POLEQ07864 2286 aa6.87□□□□□ -1.31
CTHRC1-203ENST00000520337 TRDV1A0A1B0GX56 115 aa6.87□□□□□ -1.31
CTHRC1-203ENST00000520337 TMEM8BA6NDV4 472 aa6.87□□□□□ -1.31
CTHRC1-203ENST00000520337 CD8B2A6NJW9 211 aa6.87□□□□□ -1.31
CTHRC1-203ENST00000520337 SS18L1O75177 396 aaPredicted RBP6.87□□□□□ -1.31
CTHRC1-203ENST00000520337 SRSF10O75494 262 aaKnown RBP6.87□□□□□ -1.31
CTHRC1-203ENST00000520337 PNPP00491 289 aa6.87□□□□□ -1.31
CTHRC1-203ENST00000520337 IGHV3-9P01782 118 aa6.87□□□□□ -1.31
CTHRC1-203ENST00000520337 KRT8P05787 483 aa6.87□□□□□ -1.31
CTHRC1-203ENST00000520337 CD1AP06126 327 aa6.87□□□□□ -1.31
CTHRC1-203ENST00000520337 TACSTD2P09758 323 aa6.87□□□□□ -1.31
CTHRC1-203ENST00000520337 FCGR2AP12318 317 aa6.87□□□□□ -1.31
CTHRC1-203ENST00000520337 CD53P19397 219 aa6.87□□□□□ -1.31
CTHRC1-203ENST00000520337 TNFRSF1AP19438 455 aa6.87□□□□□ -1.31
CTHRC1-203ENST00000520337 MSR1P21757 451 aa6.87□□□□□ -1.31
CTHRC1-203ENST00000520337 PSMA1P25786 263 aaKnown RBP6.87□□□□□ -1.31
CTHRC1-203ENST00000520337 AGTR1P30556 359 aa6.87□□□□□ -1.31
CTHRC1-203ENST00000520337 GABRA5P31644 462 aa6.87□□□□□ -1.31
CTHRC1-203ENST00000520337 SOX6P35712 828 aa6.87□□□□□ -1.31
CTHRC1-203ENST00000520337 TGM4P49221 684 aa6.87□□□□□ -1.31
CTHRC1-203ENST00000520337 ZNF84P51523 738 aa6.87□□□□□ -1.31
CTHRC1-203ENST00000520337 GBX2P52951 348 aaPredicted RBP6.87□□□□□ -1.31
CTHRC1-203ENST00000520337 TAS2R43P59537 309 aa6.87□□□□□ -1.31
CTHRC1-203ENST00000520337 VBP1P61758 197 aa6.87□□□□□ -1.31
CTHRC1-203ENST00000520337 HIST1H3AP68431 136 aa6.87□□□□□ -1.31
CTHRC1-203ENST00000520337 MRPS34P82930 218 aaKnown RBP6.87□□□□□ -1.31
CTHRC1-203ENST00000520337 FABP5Q01469 135 aa6.87□□□□□ -1.31
CTHRC1-203ENST00000520337 CDK5R1Q15078 307 aa6.87□□□□□ -1.31
CTHRC1-203ENST00000520337 STK11Q15831 433 aa6.87□□□□□ -1.31
CTHRC1-203ENST00000520337 KCNJ8Q15842 424 aa6.87□□□□□ -1.31
CTHRC1-203ENST00000520337 SGCAQ16586 387 aa6.87□□□□□ -1.31
CTHRC1-203ENST00000520337 C21orf62-AS1Q17RA5 79 aa6.87□□□□□ -1.31
CTHRC1-203ENST00000520337 CEACAM16Q2WEN9 425 aa6.87□□□□□ -1.31
CTHRC1-203ENST00000520337 ACSF3Q4G176 576 aaPredicted RBP6.87□□□□□ -1.31
CTHRC1-203ENST00000520337 CCDC58Q4VC31 144 aa6.87□□□□□ -1.31
CTHRC1-203ENST00000520337 HIST2H3PS2Q5TEC6 136 aa6.87□□□□□ -1.31
CTHRC1-203ENST00000520337 RTL6Q6ICC9 239 aa6.87□□□□□ -1.31
CTHRC1-203ENST00000520337 ZNF585AQ6P3V2 769 aa6.87□□□□□ -1.31
CTHRC1-203ENST00000520337 RPL22L1Q6P5R6 122 aaKnown RBP6.87□□□□□ -1.31
CTHRC1-203ENST00000520337 ARL9Q6T311 187 aa6.87□□□□□ -1.31
CTHRC1-203ENST00000520337 FAM180AQ6UWF9 173 aa6.87□□□□□ -1.31
CTHRC1-203ENST00000520337 LRRN1Q6UXK5 716 aa6.87□□□□□ -1.31
CTHRC1-203ENST00000520337 TMEM91Q6ZNR0 172 aa6.87□□□□□ -1.31
CTHRC1-203ENST00000520337 GDPGP1Q6ZNW5 385 aa6.87□□□□□ -1.31
CTHRC1-203ENST00000520337 CFAP77Q6ZQR2 320 aa6.87□□□□□ -1.31
CTHRC1-203ENST00000520337 SEM1Q6ZVN7 128 aa6.87□□□□□ -1.31
CTHRC1-203ENST00000520337 HIST2H3AQ71DI3 136 aa6.87□□□□□ -1.31
CTHRC1-203ENST00000520337 DCXRQ7Z4W1 244 aa6.87□□□□□ -1.31
CTHRC1-203ENST00000520337 LYSMD2Q8IV50 215 aa6.87□□□□□ -1.31
CTHRC1-203ENST00000520337 ZNF679Q8IYX0 411 aa6.87□□□□□ -1.31
CTHRC1-203ENST00000520337 GPR137CQ8N3F9 429 aa6.87□□□□□ -1.31
CTHRC1-203ENST00000520337 C9orf106Q8NAJ2 232 aa6.87□□□□□ -1.31
CTHRC1-203ENST00000520337 OR10H5Q8NGA6 315 aa6.87□□□□□ -1.31
CTHRC1-203ENST00000520337 OR52N5Q8NH56 324 aa6.87□□□□□ -1.31
CTHRC1-203ENST00000520337 SETD6Q8TBK2 473 aa6.87□□□□□ -1.31
CTHRC1-203ENST00000520337 RNF133Q8WVZ7 376 aa6.87□□□□□ -1.31
CTHRC1-203ENST00000520337 HSD17B8Q92506 261 aa6.87□□□□□ -1.31
CTHRC1-203ENST00000520337 TMEM203Q969S6 136 aa6.87□□□□□ -1.31
CTHRC1-203ENST00000520337 GMPPAQ96IJ6 420 aaPredicted RBP6.87□□□□□ -1.31
CTHRC1-203ENST00000520337 ALKBH3Q96Q83 286 aaPredicted RBP6.87□□□□□ -1.31
CTHRC1-203ENST00000520337 TRIB1Q96RU8 372 aa6.87□□□□□ -1.31
CTHRC1-203ENST00000520337 DCLRE1CQ96SD1 692 aaKnown RBP6.87□□□□□ -1.31
CTHRC1-203ENST00000520337 KCNJ15Q99712 375 aa6.87□□□□□ -1.31
CTHRC1-203ENST00000520337 SLX1AQ9BQ83 275 aa6.87□□□□□ -1.31
CTHRC1-203ENST00000520337 TTYH2Q9BSA4 534 aa6.87□□□□□ -1.31
CTHRC1-203ENST00000520337 CCDC32Q9BV29 185 aa6.87□□□□□ -1.31
CTHRC1-203ENST00000520337 ZNF416Q9BWM5 594 aa6.87□□□□□ -1.31
CTHRC1-203ENST00000520337 SLCO5A1Q9H2Y9 848 aa6.87□□□□□ -1.31
CTHRC1-203ENST00000520337 TMPRSS5Q9H3S3 457 aa6.87□□□□□ -1.31
CTHRC1-203ENST00000520337 C1orf198Q9H425 327 aa6.87□□□□□ -1.31
CTHRC1-203ENST00000520337 PNRC2Q9NPJ4 139 aaKnown RBP6.87□□□□□ -1.31
CTHRC1-203ENST00000520337 B3GAT2Q9NPZ5 323 aa6.87□□□□□ -1.31
CTHRC1-203ENST00000520337 GLRX2Q9NS18 164 aa6.87□□□□□ -1.31
CTHRC1-203ENST00000520337 CRNNQ9UBG3 495 aaPredicted RBP6.87□□□□□ -1.31
CTHRC1-203ENST00000520337 STUB1Q9UNE7 303 aa6.87□□□□□ -1.31
CTHRC1-203ENST00000520337 ACACBO00763 2458 aa6.87□□□□□ -1.31
CTHRC1-203ENST00000520337 BSNQ9UPA5 3926 aa6.86□□□□□ -1.31
CTHRC1-203ENST00000520337 PKD1L2Q7Z442 2459 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms