RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 RAB6AP20340 208 aa9.78□□□□□ -0.84
PCDHGA1-202ENST00000517417 EXT1Q16394 746 aa9.78□□□□□ -0.84
PCDHGA1-202ENST00000517417 NR2C2APQ86WQ0 139 aa9.78□□□□□ -0.84
PCDHGA1-202ENST00000517417 LSRQ86X29 649 aaPredicted RBP9.78□□□□□ -0.84
PCDHGA1-202ENST00000517417 FER1L6-AS2Q96M78 137 aa9.78□□□□□ -0.84
PCDHGA1-202ENST00000517417 PTDSS2Q9BVG9 487 aa9.78□□□□□ -0.84
PCDHGA1-202ENST00000517417 BIN3Q9NQY0 253 aa9.78□□□□□ -0.84
PCDHGA1-202ENST00000517417 TAS2R4Q9NYW5 299 aa9.78□□□□□ -0.84
PCDHGA1-202ENST00000517417 NTMQ9P121 344 aa9.78□□□□□ -0.84
PCDHGA1-202ENST00000517417 MRPS2Q9Y399 296 aaKnown RBP9.78□□□□□ -0.84
PCDHGA1-202ENST00000517417 NLRC5Q86WI3 1866 aa9.78□□□□□ -0.84
PCDHGA1-202ENST00000517417 A0A0B4J2E0 115 aa9.78□□□□□ -0.84
PCDHGA1-202ENST00000517417 A0A1B0GX12 115 aa9.78□□□□□ -0.84
PCDHGA1-202ENST00000517417 GLULP15104 373 aa9.78□□□□□ -0.84
PCDHGA1-202ENST00000517417 CXCL2P19875 107 aa9.78□□□□□ -0.84
PCDHGA1-202ENST00000517417 COL9A1P20849 921 aa9.78□□□□□ -0.84
PCDHGA1-202ENST00000517417 TAS2R46P59540 309 aa9.78□□□□□ -0.84
PCDHGA1-202ENST00000517417 PPP1CAP62136 330 aa9.78□□□□□ -0.84
PCDHGA1-202ENST00000517417 CPEB2Q7Z5Q1 589 aaKnown RBP9.78□□□□□ -0.84
PCDHGA1-202ENST00000517417 MARC2Q969Z3 335 aa9.78□□□□□ -0.84
PCDHGA1-202ENST00000517417 NELFAQ9H3P2 528 aa9.78□□□□□ -0.84
PCDHGA1-202ENST00000517417 KCNG2Q9UJ96 466 aa9.78□□□□□ -0.84
PCDHGA1-202ENST00000517417 PIGLQ9Y2B2 252 aa9.78□□□□□ -0.84
PCDHGA1-202ENST00000517417 PLXNA3P51805 1871 aa9.78□□□□□ -0.84
PCDHGA1-202ENST00000517417 FNDC1Q4ZHG4 1894 aaPredicted RBP9.78□□□□□ -0.84
PCDHGA1-202ENST00000517417 A0A0B4J2A0 478 aa9.78□□□□□ -0.84
PCDHGA1-202ENST00000517417 TTLL8A6PVC2 850 aa9.78□□□□□ -0.84
PCDHGA1-202ENST00000517417 STMND1H3BQB6 276 aa9.78□□□□□ -0.84
PCDHGA1-202ENST00000517417 OGG1O15527 345 aa9.78□□□□□ -0.84
PCDHGA1-202ENST00000517417 ATG12O94817 140 aa9.78□□□□□ -0.84
PCDHGA1-202ENST00000517417 IGHEP01854 428 aa9.78□□□□□ -0.84
PCDHGA1-202ENST00000517417 CPT2P23786 658 aa9.78□□□□□ -0.84
PCDHGA1-202ENST00000517417 FLI1Q01543 452 aaPredicted RBP9.78□□□□□ -0.84
PCDHGA1-202ENST00000517417 MAML2Q8IZL2 1156 aaPredicted RBP9.78□□□□□ -0.84
PCDHGA1-202ENST00000517417 GABRG1Q8N1C3 465 aa9.78□□□□□ -0.84
PCDHGA1-202ENST00000517417 MUC20Q8N307 709 aaPredicted RBP9.78□□□□□ -0.84
PCDHGA1-202ENST00000517417 STK35Q8TDR2 534 aa9.78□□□□□ -0.84
PCDHGA1-202ENST00000517417 SULT4A1Q9BR01 284 aa9.78□□□□□ -0.84
PCDHGA1-202ENST00000517417 CHST11Q9NPF2 352 aa9.78□□□□□ -0.84
PCDHGA1-202ENST00000517417 SLC22A11Q9NSA0 550 aa9.78□□□□□ -0.84
PCDHGA1-202ENST00000517417 SHPKQ9UHJ6 478 aa9.78□□□□□ -0.84
PCDHGA1-202ENST00000517417 SLC22A23A1A5C7 686 aa9.78□□□□□ -0.84
PCDHGA1-202ENST00000517417 EFSO43281 561 aa9.78□□□□□ -0.84
PCDHGA1-202ENST00000517417 GLSO94925 669 aaPredicted RBP9.78□□□□□ -0.84
PCDHGA1-202ENST00000517417 CPN1P15169 458 aa9.78□□□□□ -0.84
PCDHGA1-202ENST00000517417 ERVK-16P61578 105 aa9.78□□□□□ -0.84
PCDHGA1-202ENST00000517417 CLRN3Q8NCR9 226 aa9.78□□□□□ -0.84
PCDHGA1-202ENST00000517417 SLC25A43Q8WUT9 341 aaPredicted RBP9.78□□□□□ -0.84
PCDHGA1-202ENST00000517417 COX14Q96I36 57 aa9.78□□□□□ -0.84
PCDHGA1-202ENST00000517417 ST6GALNAC2Q9UJ37 374 aa9.78□□□□□ -0.84
PCDHGA1-202ENST00000517417 MYOFQ9NZM1 2061 aa9.77□□□□□ -0.84
PCDHGA1-202ENST00000517417 IGHV3-15A0A0B4J1V0 119 aa9.77□□□□□ -0.84
PCDHGA1-202ENST00000517417 TMEM235A6NFC5 223 aa9.77□□□□□ -0.84
PCDHGA1-202ENST00000517417 ZNF587BE7ETH6 402 aa9.77□□□□□ -0.84
PCDHGA1-202ENST00000517417 XRCC3O43542 346 aa9.77□□□□□ -0.84
PCDHGA1-202ENST00000517417 SGCEO43556 437 aa9.77□□□□□ -0.84
PCDHGA1-202ENST00000517417 CELA2BP08218 269 aaPredicted RBP9.77□□□□□ -0.84
PCDHGA1-202ENST00000517417 FOSL1P15407 271 aa9.77□□□□□ -0.84
PCDHGA1-202ENST00000517417 EIF2S3P41091 472 aaKnown RBP9.77□□□□□ -0.84
PCDHGA1-202ENST00000517417 GAS1P54826 345 aa9.77□□□□□ -0.84
PCDHGA1-202ENST00000517417 WDR88Q6ZMY6 472 aa9.77□□□□□ -0.84
PCDHGA1-202ENST00000517417 SYT13Q7L8C5 426 aa9.77□□□□□ -0.84
PCDHGA1-202ENST00000517417 ADGRE4PQ86SQ3 457 aa9.77□□□□□ -0.84
PCDHGA1-202ENST00000517417 OR11G2Q8NGC1 345 aa9.77□□□□□ -0.84
PCDHGA1-202ENST00000517417 SLAMF6Q96DU3 332 aa9.77□□□□□ -0.84
PCDHGA1-202ENST00000517417 MVB12AQ96EY5 273 aa9.77□□□□□ -0.84
PCDHGA1-202ENST00000517417 MS4A3Q96HJ5 214 aa9.77□□□□□ -0.84
PCDHGA1-202ENST00000517417 SLC25A21Q9BQT8 299 aaPredicted RBP9.77□□□□□ -0.84
PCDHGA1-202ENST00000517417 LAT2Q9GZY6 243 aa9.77□□□□□ -0.84
PCDHGA1-202ENST00000517417 KCNJ16Q9NPI9 418 aa9.77□□□□□ -0.84
PCDHGA1-202ENST00000517417 LRFN1Q9P244 771 aa9.77□□□□□ -0.84
PCDHGA1-202ENST00000517417 PCDHGA9Q9Y5G4 932 aaKnown RBP9.77□□□□□ -0.84
PCDHGA1-202ENST00000517417 SNAPINO95295 136 aa9.77□□□□□ -0.85
PCDHGA1-202ENST00000517417 IFNA1P01562 189 aa9.77□□□□□ -0.85
PCDHGA1-202ENST00000517417 OR4E1P0C645 316 aa9.77□□□□□ -0.85
PCDHGA1-202ENST00000517417 ZNF136P52737 540 aa9.77□□□□□ -0.85
PCDHGA1-202ENST00000517417 PGAP1Q75T13 922 aa9.77□□□□□ -0.85
PCDHGA1-202ENST00000517417 RHOUQ7L0Q8 258 aa9.77□□□□□ -0.85
PCDHGA1-202ENST00000517417 OR56B2PQ8NGI1 322 aa9.77□□□□□ -0.85
PCDHGA1-202ENST00000517417 PGLYRP3Q96LB9 341 aa9.77□□□□□ -0.85
PCDHGA1-202ENST00000517417 GDF15Q99988 308 aa9.77□□□□□ -0.85
PCDHGA1-202ENST00000517417 JAM3Q9BX67 310 aa9.77□□□□□ -0.85
PCDHGA1-202ENST00000517417 LANCL2Q9NS86 450 aa9.77□□□□□ -0.85
PCDHGA1-202ENST00000517417 HAO2Q9NYQ3 351 aa9.77□□□□□ -0.85
PCDHGA1-202ENST00000517417 PIGBOS1A0A0B4J2F0 54 aa9.77□□□□□ -0.85
PCDHGA1-202ENST00000517417 IGHV5-51A0A0C4DH38 117 aa9.77□□□□□ -0.85
PCDHGA1-202ENST00000517417 OR5H14A6NHG9 310 aa9.77□□□□□ -0.85
PCDHGA1-202ENST00000517417 ZNF814B7Z6K7 855 aa9.77□□□□□ -0.85
PCDHGA1-202ENST00000517417 KLRC4-KLRK1H3BQV0 150 aa9.77□□□□□ -0.85
PCDHGA1-202ENST00000517417 YKT6O15498 198 aa9.77□□□□□ -0.85
PCDHGA1-202ENST00000517417 PWWP2BQ6NUJ5 590 aa9.77□□□□□ -0.85
PCDHGA1-202ENST00000517417 FAM199XQ6PEV8 388 aaPredicted RBP9.77□□□□□ -0.85
PCDHGA1-202ENST00000517417 NAXDQ8IW45 347 aa9.77□□□□□ -0.85
PCDHGA1-202ENST00000517417 ZNF681Q96N22 645 aa9.77□□□□□ -0.85
PCDHGA1-202ENST00000517417 OR2A5Q96R48 311 aa9.77□□□□□ -0.85
PCDHGA1-202ENST00000517417 PRSS27Q9BQR3 290 aa9.77□□□□□ -0.85
PCDHGA1-202ENST00000517417 FKRPQ9H9S5 495 aa9.77□□□□□ -0.85
PCDHGA1-202ENST00000517417 PLEKHA3Q9HB20 300 aa9.77□□□□□ -0.85
PCDHGA1-202ENST00000517417 SLCO1C1Q9NYB5 712 aa9.77□□□□□ -0.85
PCDHGA1-202ENST00000517417 GABRA1P14867 456 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms