RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-223ENST00000515459 FFAR1O14842 300 aa13.03□□□□□ -0.32
LMNA-223ENST00000515459 NPPAP01160 153 aa13.03□□□□□ -0.32
LMNA-223ENST00000515459 IFNW1P05000 195 aa13.03□□□□□ -0.32
LMNA-223ENST00000515459 ZNF26P17031 533 aaPredicted RBP13.03□□□□□ -0.32
LMNA-223ENST00000515459 SDHAP31040 664 aa13.03□□□□□ -0.32
LMNA-223ENST00000515459 GK2Q14410 553 aaPredicted RBP13.03□□□□□ -0.32
LMNA-223ENST00000515459 MPPED2Q15777 294 aa13.03□□□□□ -0.32
LMNA-223ENST00000515459 PRAMEF6Q5VXH4 476 aa13.03□□□□□ -0.32
LMNA-223ENST00000515459 GPR139Q6DWJ6 353 aa13.03□□□□□ -0.32
LMNA-223ENST00000515459 TBPL2Q6SJ96 375 aa13.03□□□□□ -0.32
LMNA-223ENST00000515459 COLCA1Q6ZS62 124 aa13.03□□□□□ -0.32
LMNA-223ENST00000515459 Q6ZSV7 163 aa13.03□□□□□ -0.32
LMNA-223ENST00000515459 LRTOMTQ8WZ04 291 aa13.03□□□□□ -0.32
LMNA-223ENST00000515459 NUAK2Q9H093 628 aa13.03□□□□□ -0.32
LMNA-223ENST00000515459 RNF7Q9UBF6 113 aa13.03□□□□□ -0.32
LMNA-223ENST00000515459 RPS6KA6Q9UK32 745 aa13.03□□□□□ -0.32
LMNA-223ENST00000515459 LHFPL6Q9Y693 200 aa13.03□□□□□ -0.32
LMNA-223ENST00000515459 C5orf63A6NC05 138 aa13.02□□□□□ -0.33
LMNA-223ENST00000515459 FAM220BPB1ANY3 271 aa13.02□□□□□ -0.33
LMNA-223ENST00000515459 LGALS8O00214 317 aa13.02□□□□□ -0.33
LMNA-223ENST00000515459 SOCS2O14508 198 aa13.02□□□□□ -0.33
LMNA-223ENST00000515459 ADAM20O43506 726 aa13.02□□□□□ -0.33
LMNA-223ENST00000515459 NDUFA2O43678 99 aa13.02□□□□□ -0.33
LMNA-223ENST00000515459 NDUFB2O95178 105 aa13.02□□□□□ -0.33
LMNA-223ENST00000515459 CENPAP49450 140 aa13.02□□□□□ -0.33
LMNA-223ENST00000515459 HOXA4Q00056 320 aaPredicted RBP13.02□□□□□ -0.33
LMNA-223ENST00000515459 OR8B8Q15620 311 aa13.02□□□□□ -0.33
LMNA-223ENST00000515459 COQ5Q5HYK3 327 aa13.02□□□□□ -0.33
LMNA-223ENST00000515459 BEND6Q5SZJ8 279 aaPredicted RBP13.02□□□□□ -0.33
LMNA-223ENST00000515459 METTL21CQ5VZV1 264 aa13.02□□□□□ -0.33
LMNA-223ENST00000515459 PGM2L1Q6PCE3 622 aa13.02□□□□□ -0.33
LMNA-223ENST00000515459 RRM2BQ7LG56 351 aa13.02□□□□□ -0.33
LMNA-223ENST00000515459 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.02□□□□□ -0.33
LMNA-223ENST00000515459 ADCK1Q86TW2 530 aa13.02□□□□□ -0.33
LMNA-223ENST00000515459 BOLLQ8N9W6 283 aaKnown RBP13.02□□□□□ -0.33
LMNA-223ENST00000515459 OR2T12Q8NG77 320 aa13.02□□□□□ -0.33
LMNA-223ENST00000515459 C16orf95Q9H693 158 aa13.02□□□□□ -0.33
LMNA-223ENST00000515459 FN3KRPQ9HA64 309 aa13.02□□□□□ -0.33
LMNA-223ENST00000515459 SMURF1Q9HCE7 757 aa13.02□□□□□ -0.33
LMNA-223ENST00000515459 TRIM36Q9NQ86 728 aa13.02□□□□□ -0.33
LMNA-223ENST00000515459 TET2Q6N021 2002 aaPredicted RBP13.01□□□□□ -0.33
LMNA-223ENST00000515459 C3orf80F5H4A9 247 aa13.01□□□□□ -0.33
LMNA-223ENST00000515459 IMPA2O14732 288 aa13.01□□□□□ -0.33
LMNA-223ENST00000515459 CSF1P09603 554 aa13.01□□□□□ -0.33
LMNA-223ENST00000515459 ARF6P62330 175 aa13.01□□□□□ -0.33
LMNA-223ENST00000515459 COX10Q12887 443 aa13.01□□□□□ -0.33
LMNA-223ENST00000515459 MALLQ13021 153 aa13.01□□□□□ -0.33
LMNA-223ENST00000515459 OR8G1Q15617 311 aa13.01□□□□□ -0.33
LMNA-223ENST00000515459 MEP1BQ16820 701 aa13.01□□□□□ -0.33
LMNA-223ENST00000515459 RSPO1Q2MKA7 263 aaPredicted RBP13.01□□□□□ -0.33
LMNA-223ENST00000515459 C11orf91Q3C1V1 193 aa13.01□□□□□ -0.33
LMNA-223ENST00000515459 DHRS7BQ6IAN0 325 aaPredicted RBP13.01□□□□□ -0.33
LMNA-223ENST00000515459 CORO6Q6QEF8 472 aa13.01□□□□□ -0.33
LMNA-223ENST00000515459 VTCN1Q7Z7D3 282 aa13.01□□□□□ -0.33
LMNA-223ENST00000515459 SPRYD4Q8WW59 207 aaPredicted RBP13.01□□□□□ -0.33
LMNA-223ENST00000515459 SLCO4A1Q96BD0 722 aa13.01□□□□□ -0.33
LMNA-223ENST00000515459 SLC22A4Q9H015 551 aa13.01□□□□□ -0.33
LMNA-223ENST00000515459 NRIP3Q9NQ35 241 aa13.01□□□□□ -0.33
LMNA-223ENST00000515459 SIGLEC7Q9Y286 467 aa13.01□□□□□ -0.33
LMNA-223ENST00000515459 TMEM5Q9Y2B1 443 aa13.01□□□□□ -0.33
LMNA-223ENST00000515459 NOP16Q9Y3C1 178 aaKnown RBP13.01□□□□□ -0.33
LMNA-223ENST00000515459 FAM96BQ9Y3D0 163 aa13.01□□□□□ -0.33
LMNA-223ENST00000515459 TRAV38-1A0A0B4J264 116 aa13□□□□□ -0.33
LMNA-223ENST00000515459 A0A0G2JND7 137 aa13□□□□□ -0.33
LMNA-223ENST00000515459 OOEPA6NGQ2 149 aa13□□□□□ -0.33
LMNA-223ENST00000515459 F5H5K5 113 aa13□□□□□ -0.33
LMNA-223ENST00000515459 MRASO14807 208 aa13□□□□□ -0.33
LMNA-223ENST00000515459 PTP4A3O75365 173 aa13□□□□□ -0.33
LMNA-223ENST00000515459 ALX3O95076 343 aa13□□□□□ -0.33
LMNA-223ENST00000515459 PTBP3O95758 552 aaKnown RBP13□□□□□ -0.33
LMNA-223ENST00000515459 ECDO95905 644 aaPredicted RBP13□□□□□ -0.33
LMNA-223ENST00000515459 ACSM4P0C7M7 580 aa13□□□□□ -0.33
LMNA-223ENST00000515459 CA6P23280 308 aa13□□□□□ -0.33
LMNA-223ENST00000515459 CRABP1P29762 137 aa13□□□□□ -0.33
LMNA-223ENST00000515459 KRTAP27-1Q3LI81 207 aa13□□□□□ -0.33
LMNA-223ENST00000515459 DNM1P34Q6PK57 102 aa13□□□□□ -0.33
LMNA-223ENST00000515459 PTCHD4Q6ZW05 846 aa13□□□□□ -0.33
LMNA-223ENST00000515459 PGAP1Q75T13 922 aa13□□□□□ -0.33
LMNA-223ENST00000515459 BTN2A1Q7KYR7 527 aa13□□□□□ -0.33
LMNA-223ENST00000515459 PDZD9Q8IXQ8 264 aa13□□□□□ -0.33
LMNA-223ENST00000515459 PIP4P2Q8N4L2 257 aa13□□□□□ -0.33
LMNA-223ENST00000515459 PLPP7Q8NBV4 271 aa13□□□□□ -0.33
LMNA-223ENST00000515459 FAM46AQ96IP4 442 aaKnown RBP13□□□□□ -0.33
LMNA-223ENST00000515459 GPX7Q96SL4 187 aaPredicted RBP13□□□□□ -0.33
LMNA-223ENST00000515459 SIKE1Q9BRV8 207 aa13□□□□□ -0.33
LMNA-223ENST00000515459 RASSF4Q9H2L5 321 aa13□□□□□ -0.33
LMNA-223ENST00000515459 INTS9Q9NV88 658 aaKnown RBP13□□□□□ -0.33
LMNA-223ENST00000515459 BTBD17A6NE02 478 aa12.99□□□□□ -0.33
LMNA-223ENST00000515459 BBIP1A8MTZ0 92 aa12.99□□□□□ -0.33
LMNA-223ENST00000515459 DCTN6O00399 190 aa12.99□□□□□ -0.33
LMNA-223ENST00000515459 GMDSO60547 372 aa12.99□□□□□ -0.33
LMNA-223ENST00000515459 TSPAN9O75954 239 aa12.99□□□□□ -0.33
LMNA-223ENST00000515459 LCATP04180 440 aa12.99□□□□□ -0.33
LMNA-223ENST00000515459 CDKN2AP42771 156 aaKnown RBP12.99□□□□□ -0.33
LMNA-223ENST00000515459 ECH1Q13011 328 aa12.99□□□□□ -0.33
LMNA-223ENST00000515459 BEAN1Q3B7T3 259 aa12.99□□□□□ -0.33
LMNA-223ENST00000515459 MRPL21Q7Z2W9 205 aaKnown RBP12.99□□□□□ -0.33
LMNA-223ENST00000515459 ATP6V1G3Q96LB4 118 aa12.99□□□□□ -0.33
LMNA-223ENST00000515459 TSSK2Q96PF2 358 aa12.99□□□□□ -0.33
LMNA-223ENST00000515459 PITX2Q99697 317 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms