RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 OPRL1P41146 370 aa11.9□□□□□ -0.5
USP46-209ENST00000514536 MAGEB1P43366 347 aa11.9□□□□□ -0.5
USP46-209ENST00000514536 PDLIM4P50479 330 aa11.9□□□□□ -0.5
USP46-209ENST00000514536 ZNF81P51508 661 aa11.9□□□□□ -0.5
USP46-209ENST00000514536 CCL8P80075 99 aa11.9□□□□□ -0.5
USP46-209ENST00000514536 SNAI3Q3KNW1 292 aa11.9□□□□□ -0.5
USP46-209ENST00000514536 OR2T2Q6IF00 324 aa11.9□□□□□ -0.5
USP46-209ENST00000514536 FBXW12Q6X9E4 464 aa11.9□□□□□ -0.5
USP46-209ENST00000514536 UBASH3BQ8TF42 649 aa11.9□□□□□ -0.5
USP46-209ENST00000514536 TRUB1Q8WWH5 349 aaKnown RBP11.9□□□□□ -0.5
USP46-209ENST00000514536 CNN2Q99439 309 aaKnown RBP11.9□□□□□ -0.5
USP46-209ENST00000514536 REG4Q9BYZ8 158 aa11.9□□□□□ -0.5
USP46-209ENST00000514536 MSL2Q9HCI7 577 aa11.9□□□□□ -0.5
USP46-209ENST00000514536 CYSLTR2Q9NS75 346 aa11.9□□□□□ -0.5
USP46-209ENST00000514536 DNAJC27Q9NZQ0 273 aa11.9□□□□□ -0.5
USP46-209ENST00000514536 ZSCAN5BA6NJL1 495 aa11.89□□□□□ -0.51
USP46-209ENST00000514536 NCR1O76036 304 aa11.89□□□□□ -0.51
USP46-209ENST00000514536 CSF3P09919 207 aa11.89□□□□□ -0.51
USP46-209ENST00000514536 ANOS1P23352 680 aa11.89□□□□□ -0.51
USP46-209ENST00000514536 LIPAP38571 399 aa11.89□□□□□ -0.51
USP46-209ENST00000514536 CX3CR1P49238 355 aa11.89□□□□□ -0.51
USP46-209ENST00000514536 PRSS12P56730 875 aa11.89□□□□□ -0.51
USP46-209ENST00000514536 MALLQ13021 153 aa11.89□□□□□ -0.51
USP46-209ENST00000514536 GGTLC2Q14390 218 aa11.89□□□□□ -0.51
USP46-209ENST00000514536 GK2Q14410 553 aaPredicted RBP11.89□□□□□ -0.51
USP46-209ENST00000514536 TSTQ16762 297 aaKnown RBP11.89□□□□□ -0.51
USP46-209ENST00000514536 LRRN1Q6UXK5 716 aa11.89□□□□□ -0.51
USP46-209ENST00000514536 RHOUQ7L0Q8 258 aa11.89□□□□□ -0.51
USP46-209ENST00000514536 OR5AS1Q8N127 324 aa11.89□□□□□ -0.51
USP46-209ENST00000514536 C10orf105Q8TEF2 133 aa11.89□□□□□ -0.51
USP46-209ENST00000514536 C18orf12Q96KH6 178 aa11.89□□□□□ -0.51
USP46-209ENST00000514536 ADGRL4Q9HBW9 690 aa11.89□□□□□ -0.51
USP46-209ENST00000514536 BRD7Q9NPI1 651 aa11.89□□□□□ -0.51
USP46-209ENST00000514536 FAM118AQ9NWS6 357 aa11.89□□□□□ -0.51
USP46-209ENST00000514536 HAO2Q9NYQ3 351 aa11.89□□□□□ -0.51
USP46-209ENST00000514536 AASSQ9UDR5 926 aa11.89□□□□□ -0.51
USP46-209ENST00000514536 WARS2Q9UGM6 360 aaKnown RBP11.89□□□□□ -0.51
USP46-209ENST00000514536 COPS3Q9UNS2 423 aa11.89□□□□□ -0.51
USP46-209ENST00000514536 NF1P21359 2839 aa11.89□□□□□ -0.51
USP46-209ENST00000514536 TPD52L2O43399 206 aaKnown RBP11.88□□□□□ -0.51
USP46-209ENST00000514536 IGHV1-46P01743 117 aa11.88□□□□□ -0.51
USP46-209ENST00000514536 FOSL1P15407 271 aa11.88□□□□□ -0.51
USP46-209ENST00000514536 COL8A2P25067 703 aa11.88□□□□□ -0.51
USP46-209ENST00000514536 PEX2P28328 305 aa11.88□□□□□ -0.51
USP46-209ENST00000514536 HTR1FP30939 366 aa11.88□□□□□ -0.51
USP46-209ENST00000514536 PCGF3Q3KNV8 242 aa11.88□□□□□ -0.51
USP46-209ENST00000514536 Q6ZR03 302 aa11.88□□□□□ -0.51
USP46-209ENST00000514536 USP51Q70EK9 711 aa11.88□□□□□ -0.51
USP46-209ENST00000514536 KRT77Q7Z794 578 aa11.88□□□□□ -0.51
USP46-209ENST00000514536 SLC35F2Q8IXU6 374 aa11.88□□□□□ -0.51
USP46-209ENST00000514536 ZNF786Q8N393 782 aa11.88□□□□□ -0.51
USP46-209ENST00000514536 MAPK1IP1LQ8NDC0 245 aa11.88□□□□□ -0.51
USP46-209ENST00000514536 OR51G2Q8NGK0 314 aa11.88□□□□□ -0.51
USP46-209ENST00000514536 OR2AE1Q8NHA4 323 aa11.88□□□□□ -0.51
USP46-209ENST00000514536 TTTY10Q9BZA0 68 aa11.88□□□□□ -0.51
USP46-209ENST00000514536 DCLRE1BQ9H816 532 aa11.88□□□□□ -0.51
USP46-209ENST00000514536 MYOZ1Q9NP98 299 aaPredicted RBP11.88□□□□□ -0.51
USP46-209ENST00000514536 DECR2Q9NUI1 292 aa11.88□□□□□ -0.51
USP46-209ENST00000514536 SMPD3Q9NY59 655 aaPredicted RBP11.88□□□□□ -0.51
USP46-209ENST00000514536 NKIRAS2Q9NYR9 191 aa11.88□□□□□ -0.51
USP46-209ENST00000514536 TMEM14AQ9Y6G1 99 aa11.88□□□□□ -0.51
USP46-209ENST00000514536 LOC100130705A0A1B0GUX0 176 aa11.88□□□□□ -0.51
USP46-209ENST00000514536 LOC390937A0A1W2PQ73 354 aa11.88□□□□□ -0.51
USP46-209ENST00000514536 PSMD9O00233 223 aa11.88□□□□□ -0.51
USP46-209ENST00000514536 DLGAP1O14490 977 aa11.88□□□□□ -0.51
USP46-209ENST00000514536 TBX1O43435 398 aa11.88□□□□□ -0.51
USP46-209ENST00000514536 ENTPD6O75354 484 aa11.88□□□□□ -0.51
USP46-209ENST00000514536 APOL3O95236 402 aa11.88□□□□□ -0.51
USP46-209ENST00000514536 APOC1P02654 83 aa11.88□□□□□ -0.51
USP46-209ENST00000514536 ANXA2P07355 339 aaKnown RBP11.88□□□□□ -0.51
USP46-209ENST00000514536 INHBBP09529 407 aa11.88□□□□□ -0.51
USP46-209ENST00000514536 SBK2P0C263 348 aa11.88□□□□□ -0.51
USP46-209ENST00000514536 ATP6V1E1P36543 226 aa11.88□□□□□ -0.51
USP46-209ENST00000514536 ZNF121P58317 390 aaPredicted RBP11.88□□□□□ -0.51
USP46-209ENST00000514536 SNRPGP62308 76 aaKnown RBP11.88□□□□□ -0.51
USP46-209ENST00000514536 ZNF92Q03936 586 aa11.88□□□□□ -0.51
USP46-209ENST00000514536 CDK5R2Q13319 367 aa11.88□□□□□ -0.51
USP46-209ENST00000514536 GLYATL3Q5SZD4 288 aa11.88□□□□□ -0.51
USP46-209ENST00000514536 KCTD18Q6PI47 426 aaPredicted RBP11.88□□□□□ -0.51
USP46-209ENST00000514536 FAM57BQ71RH2 274 aa11.88□□□□□ -0.51
USP46-209ENST00000514536 PGAP1Q75T13 922 aa11.88□□□□□ -0.51
USP46-209ENST00000514536 RFKQ969G6 155 aa11.88□□□□□ -0.51
USP46-209ENST00000514536 COX4I2Q96KJ9 171 aa11.88□□□□□ -0.51
USP46-209ENST00000514536 CGGBP1Q9UFW8 167 aaPredicted RBP11.88□□□□□ -0.51
USP46-209ENST00000514536 ZDHHC8Q9ULC8 765 aa11.88□□□□□ -0.51
USP46-209ENST00000514536 SLC16A6O15403 523 aa11.87□□□□□ -0.51
USP46-209ENST00000514536 CDC14BO60729 498 aa11.87□□□□□ -0.51
USP46-209ENST00000514536 SLC25A16P16260 332 aa11.87□□□□□ -0.51
USP46-209ENST00000514536 SELEP16581 610 aa11.87□□□□□ -0.51
USP46-209ENST00000514536 TMED1Q13445 227 aa11.87□□□□□ -0.51
USP46-209ENST00000514536 OCLNQ16625 522 aa11.87□□□□□ -0.51
USP46-209ENST00000514536 ZMAT1Q5H9K5 638 aa11.87□□□□□ -0.51
USP46-209ENST00000514536 SLC25A30Q5SVS4 291 aa11.87□□□□□ -0.51
USP46-209ENST00000514536 PRSS45Q7RTY3 260 aa11.87□□□□□ -0.51
USP46-209ENST00000514536 MRPL21Q7Z2W9 205 aaKnown RBP11.87□□□□□ -0.51
USP46-209ENST00000514536 RFLNBQ8N5W9 214 aa11.87□□□□□ -0.51
USP46-209ENST00000514536 BHLHE23Q8NDY6 225 aa11.87□□□□□ -0.51
USP46-209ENST00000514536 ZNF555Q8NEP9 628 aa11.87□□□□□ -0.51
USP46-209ENST00000514536 OR8G5Q8NG78 346 aa11.87□□□□□ -0.51
USP46-209ENST00000514536 OR2Z1Q8NG97 314 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 131.1 ms