RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 AQP10Q96PS8 301 aa6.59□□□□□ -1.35
CLIP1-205ENST00000514271 SCN3AQ9NY46 2000 aa6.59□□□□□ -1.35
CLIP1-205ENST00000514271 A0A1W2PNU3 283 aaPredicted RBP6.59□□□□□ -1.35
CLIP1-205ENST00000514271 A0A1W2PPE3 182 aa6.59□□□□□ -1.35
CLIP1-205ENST00000514271 F5H5P2 479 aa6.59□□□□□ -1.35
CLIP1-205ENST00000514271 HIST1H1TP22492 207 aaPredicted RBP6.59□□□□□ -1.35
CLIP1-205ENST00000514271 CTSSP25774 331 aa6.59□□□□□ -1.35
CLIP1-205ENST00000514271 BDKRB2P30411 391 aa6.59□□□□□ -1.35
CLIP1-205ENST00000514271 DLSTP36957 453 aa6.59□□□□□ -1.35
CLIP1-205ENST00000514271 CBLN3Q6UW01 205 aa6.59□□□□□ -1.35
CLIP1-205ENST00000514271 TMEM205Q6UW68 189 aa6.59□□□□□ -1.35
CLIP1-205ENST00000514271 LHFPL1Q86WI0 220 aa6.59□□□□□ -1.35
CLIP1-205ENST00000514271 C8orf44Q96CB5 159 aa6.59□□□□□ -1.35
CLIP1-205ENST00000514271 NMES1Q9C002 83 aa6.59□□□□□ -1.35
CLIP1-205ENST00000514271 SPRTNQ9H040 489 aaPredicted RBP6.59□□□□□ -1.35
CLIP1-205ENST00000514271 MTHFD2LQ9H903 347 aaPredicted RBP6.59□□□□□ -1.35
CLIP1-205ENST00000514271 TMEM27Q9HBJ8 222 aa6.59□□□□□ -1.35
CLIP1-205ENST00000514271 MMP26Q9NRE1 261 aa6.59□□□□□ -1.35
CLIP1-205ENST00000514271 FOXJ2Q9P0K8 574 aa6.59□□□□□ -1.35
CLIP1-205ENST00000514271 VSIG4Q9Y279 399 aa6.59□□□□□ -1.35
CLIP1-205ENST00000514271 A0A0B4J2A0 478 aa6.59□□□□□ -1.36
CLIP1-205ENST00000514271 PTBP3O95758 552 aaKnown RBP6.59□□□□□ -1.36
CLIP1-205ENST00000514271 CRYBA1P05813 215 aa6.59□□□□□ -1.36
CLIP1-205ENST00000514271 ASAH2BP0C7U1 165 aa6.59□□□□□ -1.36
CLIP1-205ENST00000514271 TCN2P20062 427 aa6.59□□□□□ -1.36
CLIP1-205ENST00000514271 NR0B1P51843 470 aaKnown RBP6.59□□□□□ -1.36
CLIP1-205ENST00000514271 ROM1Q03395 351 aa6.59□□□□□ -1.36
CLIP1-205ENST00000514271 PRICKLE4Q2TBC4 344 aa6.59□□□□□ -1.36
CLIP1-205ENST00000514271 FAAP20Q6NZ36 180 aa6.59□□□□□ -1.36
CLIP1-205ENST00000514271 TRAT1Q6PIZ9 186 aa6.59□□□□□ -1.36
CLIP1-205ENST00000514271 OR1S2Q8NGQ3 325 aa6.59□□□□□ -1.36
CLIP1-205ENST00000514271 RNF128Q8TEB7 428 aa6.59□□□□□ -1.36
CLIP1-205ENST00000514271 C15orf40Q8WUR7 153 aa6.59□□□□□ -1.36
CLIP1-205ENST00000514271 NARS2Q96I59 477 aaKnown RBP6.59□□□□□ -1.36
CLIP1-205ENST00000514271 PRDM13Q9H4Q3 707 aa6.59□□□□□ -1.36
CLIP1-205ENST00000514271 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.59□□□□□ -1.36
CLIP1-205ENST00000514271 DUSP22Q9NRW4 184 aa6.59□□□□□ -1.36
CLIP1-205ENST00000514271 DHCR7Q9UBM7 475 aaKnown RBP6.59□□□□□ -1.36
CLIP1-205ENST00000514271 SHPKQ9UHJ6 478 aa6.59□□□□□ -1.36
CLIP1-205ENST00000514271 ZNF281Q9Y2X9 895 aa6.59□□□□□ -1.36
CLIP1-205ENST00000514271 FAM96BQ9Y3D0 163 aa6.59□□□□□ -1.36
CLIP1-205ENST00000514271 ATP23Q9Y6H3 246 aa6.59□□□□□ -1.36
CLIP1-205ENST00000514271 A0A0A6YYH2 397 aa6.58□□□□□ -1.36
CLIP1-205ENST00000514271 A6NJ64 397 aa6.58□□□□□ -1.36
CLIP1-205ENST00000514271 ARGFXA6NJG6 315 aa6.58□□□□□ -1.36
CLIP1-205ENST00000514271 ICOSLGO75144 302 aa6.58□□□□□ -1.36
CLIP1-205ENST00000514271 IGKV1D-16P01601 117 aa6.58□□□□□ -1.36
CLIP1-205ENST00000514271 ITGA5P08648 1049 aa6.58□□□□□ -1.36
CLIP1-205ENST00000514271 MANFP55145 182 aaKnown RBP6.58□□□□□ -1.36
CLIP1-205ENST00000514271 HSF1Q00613 529 aa6.58□□□□□ -1.36
CLIP1-205ENST00000514271 MADCAM1Q13477 382 aa6.58□□□□□ -1.36
CLIP1-205ENST00000514271 OR1Q1Q15612 314 aa6.58□□□□□ -1.36
CLIP1-205ENST00000514271 FAM74A1Q5RGS3 127 aa6.58□□□□□ -1.36
CLIP1-205ENST00000514271 SPACA3Q8IXA5 215 aa6.58□□□□□ -1.36
CLIP1-205ENST00000514271 TMEM239Q8WW34 195 aa6.58□□□□□ -1.36
CLIP1-205ENST00000514271 TMEM230Q96A57 120 aa6.58□□□□□ -1.36
CLIP1-205ENST00000514271 SLC5A7Q9GZV3 580 aa6.58□□□□□ -1.36
CLIP1-205ENST00000514271 PTGFRNQ9P2B2 879 aa6.58□□□□□ -1.36
CLIP1-205ENST00000514271 CPSF4LA6NMK7 179 aaKnown RBP6.58□□□□□ -1.36
CLIP1-205ENST00000514271 TEX46H3BTG2 121 aa6.58□□□□□ -1.36
CLIP1-205ENST00000514271 EIF1AYO14602 144 aaKnown RBP6.58□□□□□ -1.36
CLIP1-205ENST00000514271 TLX3O43711 291 aaPredicted RBP6.58□□□□□ -1.36
CLIP1-205ENST00000514271 SH3BGRLO75368 114 aa6.58□□□□□ -1.36
CLIP1-205ENST00000514271 NKX2-2O95096 273 aa6.58□□□□□ -1.36
CLIP1-205ENST00000514271 ISG15P05161 165 aa6.58□□□□□ -1.36
CLIP1-205ENST00000514271 CSF1P09603 554 aa6.58□□□□□ -1.36
CLIP1-205ENST00000514271 FAM76BQ5HYJ3 339 aa6.58□□□□□ -1.36
CLIP1-205ENST00000514271 GLT8D1Q68CQ7 371 aa6.58□□□□□ -1.36
CLIP1-205ENST00000514271 TTLL10Q6ZVT0 673 aa6.58□□□□□ -1.36
CLIP1-205ENST00000514271 C15orf54Q8N8G6 183 aa6.58□□□□□ -1.36
CLIP1-205ENST00000514271 M1APQ8TC57 530 aa6.58□□□□□ -1.36
CLIP1-205ENST00000514271 SNX33Q8WV41 574 aa6.58□□□□□ -1.36
CLIP1-205ENST00000514271 ZNF75AQ96N20 296 aa6.58□□□□□ -1.36
CLIP1-205ENST00000514271 TSNAXQ99598 290 aaKnown RBP6.58□□□□□ -1.36
CLIP1-205ENST00000514271 NRIP2Q9BQI9 281 aa6.58□□□□□ -1.36
CLIP1-205ENST00000514271 HDHD2Q9H0R4 259 aa6.58□□□□□ -1.36
CLIP1-205ENST00000514271 PRORYQ9H606 182 aa6.58□□□□□ -1.36
CLIP1-205ENST00000514271 CALML5Q9NZT1 146 aa6.58□□□□□ -1.36
CLIP1-205ENST00000514271 POMT1Q9Y6A1 747 aa6.58□□□□□ -1.36
CLIP1-205ENST00000514271 CYR61O00622 381 aa6.57□□□□□ -1.36
CLIP1-205ENST00000514271 EFSO43281 561 aa6.57□□□□□ -1.36
CLIP1-205ENST00000514271 ARL6IP5O75915 188 aa6.57□□□□□ -1.36
CLIP1-205ENST00000514271 OR4E1P0C645 316 aa6.57□□□□□ -1.36
CLIP1-205ENST00000514271 HIST1H1CP16403 213 aaKnown RBP6.57□□□□□ -1.36
CLIP1-205ENST00000514271 C4BPBP20851 252 aa6.57□□□□□ -1.36
CLIP1-205ENST00000514271 ACHEP22303 614 aa6.57□□□□□ -1.36
CLIP1-205ENST00000514271 PTGFRP43088 359 aa6.57□□□□□ -1.36
CLIP1-205ENST00000514271 SSR2P43308 183 aa6.57□□□□□ -1.36
CLIP1-205ENST00000514271 AP3S2P59780 193 aa6.57□□□□□ -1.36
CLIP1-205ENST00000514271 SUPT4H1P63272 117 aaKnown RBP6.57□□□□□ -1.36
CLIP1-205ENST00000514271 TNFRSF17Q02223 184 aa6.57□□□□□ -1.36
CLIP1-205ENST00000514271 STX4Q12846 297 aa6.57□□□□□ -1.36
CLIP1-205ENST00000514271 DUSP5Q16690 384 aa6.57□□□□□ -1.36
CLIP1-205ENST00000514271 COX15Q7KZN9 410 aa6.57□□□□□ -1.36
CLIP1-205ENST00000514271 SERPINA12Q8IW75 414 aa6.57□□□□□ -1.36
CLIP1-205ENST00000514271 CA13Q8N1Q1 262 aa6.57□□□□□ -1.36
CLIP1-205ENST00000514271 OR13C2Q8NGS9 318 aa6.57□□□□□ -1.36
CLIP1-205ENST00000514271 OR9A4Q8NGU2 314 aa6.57□□□□□ -1.36
CLIP1-205ENST00000514271 OR10K1Q8NGX5 313 aa6.57□□□□□ -1.36
CLIP1-205ENST00000514271 FCAMRQ8WWV6 532 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms