RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 MAS1P04201 325 aa7.35□□□□□ -1.23
RNF4-220ENST00000513578 ALDOBP05062 364 aa7.35□□□□□ -1.23
RNF4-220ENST00000513578 YES1P07947 543 aa7.35□□□□□ -1.23
RNF4-220ENST00000513578 ERCC1P07992 297 aaPredicted RBP7.35□□□□□ -1.23
RNF4-220ENST00000513578 FAM157BP0CG42 384 aa7.35□□□□□ -1.23
RNF4-220ENST00000513578 PRKAR1AP10644 381 aa7.35□□□□□ -1.23
RNF4-220ENST00000513578 RFC3P40938 356 aa7.35□□□□□ -1.23
RNF4-220ENST00000513578 RFX2P48378 723 aa7.35□□□□□ -1.23
RNF4-220ENST00000513578 CX3CR1P49238 355 aa7.35□□□□□ -1.23
RNF4-220ENST00000513578 ZNF121P58317 390 aaPredicted RBP7.35□□□□□ -1.23
RNF4-220ENST00000513578 RAB11BQ15907 218 aa7.35□□□□□ -1.23
RNF4-220ENST00000513578 RSPO1Q2MKA7 263 aaPredicted RBP7.35□□□□□ -1.23
RNF4-220ENST00000513578 RNFT1Q5M7Z0 435 aa7.35□□□□□ -1.23
RNF4-220ENST00000513578 MZT2BQ6NZ67 158 aa7.35□□□□□ -1.23
RNF4-220ENST00000513578 DRAM2Q6UX65 266 aa7.35□□□□□ -1.23
RNF4-220ENST00000513578 PGAP1Q75T13 922 aa7.35□□□□□ -1.23
RNF4-220ENST00000513578 LINGO2Q7L985 606 aa7.35□□□□□ -1.23
RNF4-220ENST00000513578 ADGRE4PQ86SQ3 457 aa7.35□□□□□ -1.23
RNF4-220ENST00000513578 ZNF283Q8N7M2 679 aa7.35□□□□□ -1.23
RNF4-220ENST00000513578 OR8B12Q8NGG6 310 aa7.35□□□□□ -1.23
RNF4-220ENST00000513578 ABHD3Q8WU67 409 aa7.35□□□□□ -1.23
RNF4-220ENST00000513578 DEDD2Q8WXF8 326 aa7.35□□□□□ -1.23
RNF4-220ENST00000513578 SPTSSAQ969W0 71 aa7.35□□□□□ -1.23
RNF4-220ENST00000513578 RFT1Q96AA3 541 aa7.35□□□□□ -1.23
RNF4-220ENST00000513578 ITPKCQ96DU7 683 aa7.35□□□□□ -1.23
RNF4-220ENST00000513578 FBXO17Q96EF6 278 aa7.35□□□□□ -1.23
RNF4-220ENST00000513578 ZNF837Q96EG3 531 aaPredicted RBP7.35□□□□□ -1.23
RNF4-220ENST00000513578 ABHD1Q96SE0 405 aa7.35□□□□□ -1.23
RNF4-220ENST00000513578 C7orf50Q9BRJ6 194 aaKnown RBP7.35□□□□□ -1.23
RNF4-220ENST00000513578 UQCC2Q9BRT2 126 aa7.35□□□□□ -1.23
RNF4-220ENST00000513578 THAP7Q9BT49 309 aaPredicted RBP7.35□□□□□ -1.23
RNF4-220ENST00000513578 C11orf54Q9H0W9 315 aaPredicted RBP7.35□□□□□ -1.23
RNF4-220ENST00000513578 EXO5Q9H790 373 aa7.35□□□□□ -1.23
RNF4-220ENST00000513578 CRLF2Q9HC73 371 aa7.35□□□□□ -1.23
RNF4-220ENST00000513578 GLRX2Q9NS18 164 aa7.35□□□□□ -1.23
RNF4-220ENST00000513578 RBFOX1Q9NWB1 397 aaKnown RBP7.35□□□□□ -1.23
RNF4-220ENST00000513578 RHBDL2Q9NX52 303 aa7.35□□□□□ -1.23
RNF4-220ENST00000513578 TAS2R4Q9NYW5 299 aa7.35□□□□□ -1.23
RNF4-220ENST00000513578 NPAP1Q9NZP6 1156 aa7.35□□□□□ -1.23
RNF4-220ENST00000513578 FBLN5Q9UBX5 448 aa7.35□□□□□ -1.23
RNF4-220ENST00000513578 ZNF391Q9UJN7 358 aa7.35□□□□□ -1.23
RNF4-220ENST00000513578 RHBDD3Q9Y3P4 386 aa7.35□□□□□ -1.23
RNF4-220ENST00000513578 TIMM10BQ9Y5J6 103 aa7.35□□□□□ -1.23
RNF4-220ENST00000513578 V9GYS6 101 aa7.35□□□□□ -1.23
RNF4-220ENST00000513578 SPTBN2O15020 2390 aa7.35□□□□□ -1.23
RNF4-220ENST00000513578 FREM1Q5H8C1 2179 aa7.35□□□□□ -1.23
RNF4-220ENST00000513578 MED12LQ86YW9 2145 aa7.34□□□□□ -1.23
RNF4-220ENST00000513578 SPEGQ15772 3267 aa7.34□□□□□ -1.23
RNF4-220ENST00000513578 hCG_2014768A0A024R1R8 64 aa7.34□□□□□ -1.23
RNF4-220ENST00000513578 A0A0B4J203 849 aa7.34□□□□□ -1.23
RNF4-220ENST00000513578 LOC100289279A0A1B0GTE1 492 aa7.34□□□□□ -1.23
RNF4-220ENST00000513578 GABARAPH6UMI1 98 aa7.34□□□□□ -1.23
RNF4-220ENST00000513578 AQP7O14520 342 aa7.34□□□□□ -1.23
RNF4-220ENST00000513578 LDLRAD4O15165 306 aa7.34□□□□□ -1.23
RNF4-220ENST00000513578 SGCEO43556 437 aa7.34□□□□□ -1.23
RNF4-220ENST00000513578 FARS2O95363 451 aaKnown RBP7.34□□□□□ -1.23
RNF4-220ENST00000513578 ITGB2P05107 769 aa7.34□□□□□ -1.23
RNF4-220ENST00000513578 ITGA5P08648 1049 aa7.34□□□□□ -1.23
RNF4-220ENST00000513578 MMP7P09237 267 aaPredicted RBP7.34□□□□□ -1.23
RNF4-220ENST00000513578 COX5BP10606 129 aa7.34□□□□□ -1.23
RNF4-220ENST00000513578 FCGR2AP12318 317 aa7.34□□□□□ -1.23
RNF4-220ENST00000513578 GABRA1P14867 456 aa7.34□□□□□ -1.23
RNF4-220ENST00000513578 SPNP16150 400 aa7.34□□□□□ -1.23
RNF4-220ENST00000513578 RAB6AP20340 208 aa7.34□□□□□ -1.23
RNF4-220ENST00000513578 SDHBP21912 280 aa7.34□□□□□ -1.23
RNF4-220ENST00000513578 HTR2CP28335 458 aa7.34□□□□□ -1.23
RNF4-220ENST00000513578 BDKRB2P30411 391 aa7.34□□□□□ -1.23
RNF4-220ENST00000513578 MAP2K3P46734 347 aa7.34□□□□□ -1.23
RNF4-220ENST00000513578 PRKXP51817 358 aa7.34□□□□□ -1.23
RNF4-220ENST00000513578 TPTEP56180 551 aa7.34□□□□□ -1.23
RNF4-220ENST00000513578 ODF4Q2M2E3 257 aa7.34□□□□□ -1.23
RNF4-220ENST00000513578 CEACAM16Q2WEN9 425 aa7.34□□□□□ -1.23
RNF4-220ENST00000513578 DEFB109BQ30KR1 87 aa7.34□□□□□ -1.23
RNF4-220ENST00000513578 TSPO2Q5TGU0 170 aa7.34□□□□□ -1.23
RNF4-220ENST00000513578 RPUSD3Q6P087 351 aaKnown RBP7.34□□□□□ -1.23
RNF4-220ENST00000513578 ANKRD16Q6P6B7 361 aa7.34□□□□□ -1.23
RNF4-220ENST00000513578 ZNF813Q6ZN06 617 aa7.34□□□□□ -1.23
RNF4-220ENST00000513578 CHMP1BQ7LBR1 199 aa7.34□□□□□ -1.23
RNF4-220ENST00000513578 FGD2Q7Z6J4 655 aa7.34□□□□□ -1.23
RNF4-220ENST00000513578 NRARPQ7Z6K4 114 aa7.34□□□□□ -1.23
RNF4-220ENST00000513578 DPPA2Q7Z7J5 298 aa7.34□□□□□ -1.23
RNF4-220ENST00000513578 ZNF554Q86TJ5 538 aa7.34□□□□□ -1.23
RNF4-220ENST00000513578 SLC22A24Q8N4F4 322 aa7.34□□□□□ -1.23
RNF4-220ENST00000513578 DNAAF1Q8NEP3 725 aa7.34□□□□□ -1.23
RNF4-220ENST00000513578 OR1M1Q8NGA1 313 aa7.34□□□□□ -1.23
RNF4-220ENST00000513578 OR52H1Q8NGJ2 320 aa7.34□□□□□ -1.23
RNF4-220ENST00000513578 OR5D14Q8NGL3 314 aa7.34□□□□□ -1.23
RNF4-220ENST00000513578 OR1J2Q8NGS2 313 aa7.34□□□□□ -1.23
RNF4-220ENST00000513578 OR14K1Q8NGZ2 314 aa7.34□□□□□ -1.23
RNF4-220ENST00000513578 OR1F12Q8NHA8 337 aa7.34□□□□□ -1.23
RNF4-220ENST00000513578 SYNPRQ8TBG9 265 aa7.34□□□□□ -1.23
RNF4-220ENST00000513578 SMIM4Q8WVI0 70 aa7.34□□□□□ -1.23
RNF4-220ENST00000513578 YIPF5Q969M3 257 aa7.34□□□□□ -1.23
RNF4-220ENST00000513578 FAM3DQ96BQ1 224 aa7.34□□□□□ -1.23
RNF4-220ENST00000513578 FGGYQ96C11 551 aa7.34□□□□□ -1.23
RNF4-220ENST00000513578 SORCS2Q96PQ0 1159 aa7.34□□□□□ -1.23
RNF4-220ENST00000513578 PRRG4Q9BZD6 226 aa7.34□□□□□ -1.23
RNF4-220ENST00000513578 LDAHQ9H6V9 325 aa7.34□□□□□ -1.23
RNF4-220ENST00000513578 TMEM138Q9NPI0 162 aa7.34□□□□□ -1.23
RNF4-220ENST00000513578 SPRR3Q9UBC9 169 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms