RNA–Protein interactions for RNA: ENST00000513452.5

CLDND1-227, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-227ENST00000513452 DUX4L4P0CJ87 422 aa8.56□□□□□ -1.04
CLDND1-227ENST00000513452 DUX4L5P0CJ88 424 aa8.56□□□□□ -1.04
CLDND1-227ENST00000513452 DUX4L6P0CJ89 424 aa8.56□□□□□ -1.04
CLDND1-227ENST00000513452 DUX4L7P0CJ90 424 aa8.56□□□□□ -1.04
CLDND1-227ENST00000513452 RBM34P42696 430 aaKnown RBP8.56□□□□□ -1.04
CLDND1-227ENST00000513452 CTXN1P60606 82 aa8.56□□□□□ -1.04
CLDND1-227ENST00000513452 CCDC92Q53HC0 331 aaPredicted RBP8.56□□□□□ -1.04
CLDND1-227ENST00000513452 DUX4L9Q6RFH8 374 aaPredicted RBP8.56□□□□□ -1.04
CLDND1-227ENST00000513452 NKAIN4Q8IVV8 208 aa8.56□□□□□ -1.04
CLDND1-227ENST00000513452 BEND2Q8NDZ0 799 aa8.56□□□□□ -1.04
CLDND1-227ENST00000513452 RORBQ92753 470 aa8.56□□□□□ -1.04
CLDND1-227ENST00000513452 SSX3Q99909 188 aa8.56□□□□□ -1.04
CLDND1-227ENST00000513452 HCAR1Q9BXC0 346 aa8.56□□□□□ -1.04
CLDND1-227ENST00000513452 NPFFR1Q9GZQ6 430 aa8.56□□□□□ -1.04
CLDND1-227ENST00000513452 RAB18Q9NP72 206 aa8.56□□□□□ -1.04
CLDND1-227ENST00000513452 DUX4Q9UBX2 424 aa8.56□□□□□ -1.04
CLDND1-227ENST00000513452 CORO2BQ9UQ03 480 aa8.56□□□□□ -1.04
CLDND1-227ENST00000513452 BIRC6Q9NR09 4857 aa8.56□□□□□ -1.04
CLDND1-227ENST00000513452 TENM2Q9NT68 2774 aa8.56□□□□□ -1.04
CLDND1-227ENST00000513452 A6NIZ1 184 aa8.55□□□□□ -1.04
CLDND1-227ENST00000513452 E9PQ18 207 aa8.55□□□□□ -1.04
CLDND1-227ENST00000513452 C3orf84H3BNL1 204 aa8.55□□□□□ -1.04
CLDND1-227ENST00000513452 M0QX08 132 aa8.55□□□□□ -1.04
CLDND1-227ENST00000513452 RER1O15258 196 aa8.55□□□□□ -1.04
CLDND1-227ENST00000513452 GPX2P18283 190 aa8.55□□□□□ -1.04
CLDND1-227ENST00000513452 HOXD3P31249 432 aaPredicted RBP8.55□□□□□ -1.04
CLDND1-227ENST00000513452 RPL4P36578 427 aaKnown RBP8.55□□□□□ -1.04
CLDND1-227ENST00000513452 RAP1BP61224 184 aa8.55□□□□□ -1.04
CLDND1-227ENST00000513452 RAP1AP62834 184 aa8.55□□□□□ -1.04
CLDND1-227ENST00000513452 OR8G1Q15617 311 aa8.55□□□□□ -1.04
CLDND1-227ENST00000513452 C11orf91Q3C1V1 193 aa8.55□□□□□ -1.04
CLDND1-227ENST00000513452 Q8N7P7 452 aa8.55□□□□□ -1.04
CLDND1-227ENST00000513452 EIF1ADQ8N9N8 165 aaKnown RBP8.55□□□□□ -1.04
CLDND1-227ENST00000513452 C11orf65Q8NCR3 313 aa8.55□□□□□ -1.04
CLDND1-227ENST00000513452 WFDC9Q8NEX5 89 aa8.55□□□□□ -1.04
CLDND1-227ENST00000513452 OR51G2Q8NGK0 314 aa8.55□□□□□ -1.04
CLDND1-227ENST00000513452 SLC7A13Q8TCU3 470 aa8.55□□□□□ -1.04
CLDND1-227ENST00000513452 LRRC8CQ8TDW0 803 aa8.55□□□□□ -1.04
CLDND1-227ENST00000513452 C17orf50Q8WW18 174 aa8.55□□□□□ -1.04
CLDND1-227ENST00000513452 TMEM239Q8WW34 195 aa8.55□□□□□ -1.04
CLDND1-227ENST00000513452 LIPHQ8WWY8 451 aa8.55□□□□□ -1.04
CLDND1-227ENST00000513452 MAELQ96JY0 434 aaKnown RBP8.55□□□□□ -1.04
CLDND1-227ENST00000513452 OR52B2Q96RD2 323 aa8.55□□□□□ -1.04
CLDND1-227ENST00000513452 ADAT1Q9BUB4 502 aaKnown RBP8.55□□□□□ -1.04
CLDND1-227ENST00000513452 KRTAP17-1Q9BYP8 105 aa8.55□□□□□ -1.04
CLDND1-227ENST00000513452 FAM234AQ9H0X4 552 aa8.55□□□□□ -1.04
CLDND1-227ENST00000513452 ZNF702PQ9H963 129 aa8.55□□□□□ -1.04
CLDND1-227ENST00000513452 C1orf123Q9NWV4 160 aa8.55□□□□□ -1.04
CLDND1-227ENST00000513452 ATPIF1Q9UII2 106 aa8.55□□□□□ -1.04
CLDND1-227ENST00000513452 HIF3AQ9Y2N7 669 aa8.55□□□□□ -1.04
CLDND1-227ENST00000513452 U3KQK5 164 aa8.55□□□□□ -1.04
CLDND1-227ENST00000513452 EPPK1P58107 5090 aaKnown RBP8.54□□□□□ -1.04
CLDND1-227ENST00000513452 TRBV5-3A0A0A0MS03 114 aa8.54□□□□□ -1.04
CLDND1-227ENST00000513452 hCG_1807616A0A1W2PRN6 198 aa8.54□□□□□ -1.04
CLDND1-227ENST00000513452 A6NLC8 198 aa8.54□□□□□ -1.04
CLDND1-227ENST00000513452 EVPLLA8MZ36 301 aa8.54□□□□□ -1.04
CLDND1-227ENST00000513452 IGF2P01344 180 aa8.54□□□□□ -1.04
CLDND1-227ENST00000513452 ZNF26P17031 533 aaPredicted RBP8.54□□□□□ -1.04
CLDND1-227ENST00000513452 CA6P23280 308 aa8.54□□□□□ -1.04
CLDND1-227ENST00000513452 PAX6P26367 422 aa8.54□□□□□ -1.04
CLDND1-227ENST00000513452 TAS2R41P59536 307 aa8.54□□□□□ -1.04
CLDND1-227ENST00000513452 SLC35A2P78381 396 aa8.54□□□□□ -1.04
CLDND1-227ENST00000513452 ELF3P78545 371 aaPredicted RBP8.54□□□□□ -1.04
CLDND1-227ENST00000513452 GK2Q14410 553 aaPredicted RBP8.54□□□□□ -1.04
CLDND1-227ENST00000513452 CYP51A1Q16850 503 aa8.54□□□□□ -1.04
CLDND1-227ENST00000513452 LRRC75BQ2VPJ9 315 aa8.54□□□□□ -1.04
CLDND1-227ENST00000513452 PAGE3Q5JUK9 113 aa8.54□□□□□ -1.04
CLDND1-227ENST00000513452 CRIP3Q6Q6R5 217 aa8.54□□□□□ -1.04
CLDND1-227ENST00000513452 ZNF826PQ6ZT77 177 aa8.54□□□□□ -1.04
CLDND1-227ENST00000513452 MICU2Q8IYU8 434 aa8.54□□□□□ -1.04
CLDND1-227ENST00000513452 PAPD5Q8NDF8 572 aaKnown RBP8.54□□□□□ -1.04
CLDND1-227ENST00000513452 LY6G5BQ8NDX9 201 aa8.54□□□□□ -1.04
CLDND1-227ENST00000513452 SPRYD4Q8WW59 207 aaPredicted RBP8.54□□□□□ -1.04
CLDND1-227ENST00000513452 TNFRSF14Q92956 283 aa8.54□□□□□ -1.04
CLDND1-227ENST00000513452 CCL13Q99616 98 aa8.54□□□□□ -1.04
CLDND1-227ENST00000513452 PAIP2Q9BPZ3 127 aaKnown RBP8.54□□□□□ -1.04
CLDND1-227ENST00000513452 RERGLQ9H628 205 aa8.54□□□□□ -1.04
CLDND1-227ENST00000513452 SERTAD4Q9NUC0 356 aa8.54□□□□□ -1.04
CLDND1-227ENST00000513452 KAAG1Q9UBP8 84 aa8.54□□□□□ -1.04
CLDND1-227ENST00000513452 POLR1DQ9Y2S0 133 aa8.54□□□□□ -1.04
CLDND1-227ENST00000513452 MED31Q9Y3C7 131 aa8.54□□□□□ -1.04
CLDND1-227ENST00000513452 GMEB1Q9Y692 573 aa8.54□□□□□ -1.04
CLDND1-227ENST00000513452 STAB2Q8WWQ8 2551 aa8.53□□□□□ -1.04
CLDND1-227ENST00000513452 TRAV27A0A087WT01 109 aa8.53□□□□□ -1.04
CLDND1-227ENST00000513452 MEGF11A6BM72 1044 aa8.53□□□□□ -1.04
CLDND1-227ENST00000513452 PF4P02776 101 aa8.53□□□□□ -1.04
CLDND1-227ENST00000513452 PF4V1P10720 104 aa8.53□□□□□ -1.04
CLDND1-227ENST00000513452 CTLA4P16410 223 aa8.53□□□□□ -1.04
CLDND1-227ENST00000513452 TNFRSF1BP20333 461 aa8.53□□□□□ -1.04
CLDND1-227ENST00000513452 BMXP51813 675 aa8.53□□□□□ -1.04
CLDND1-227ENST00000513452 UBE2E1P51965 193 aa8.53□□□□□ -1.04
CLDND1-227ENST00000513452 ACSM1Q08AH1 577 aa8.53□□□□□ -1.04
CLDND1-227ENST00000513452 IKZF1Q13422 519 aa8.53□□□□□ -1.04
CLDND1-227ENST00000513452 DOC2BQ14184 412 aa8.53□□□□□ -1.04
CLDND1-227ENST00000513452 MAVSQ7Z434 540 aa8.53□□□□□ -1.04
CLDND1-227ENST00000513452 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.53□□□□□ -1.04
CLDND1-227ENST00000513452 GCSAMQ8N6F7 178 aa8.53□□□□□ -1.04
CLDND1-227ENST00000513452 FAM216BQ8N7L0 139 aa8.53□□□□□ -1.04
CLDND1-227ENST00000513452 LRRC75AQ8NAA5 344 aa8.53□□□□□ -1.04
CLDND1-227ENST00000513452 SLC26A7Q8TE54 656 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms