RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 PHYHO14832 338 aa2.97□□□□□ -1.93
PDLIM5-218ENST00000513341 SPRY3O43610 288 aa2.97□□□□□ -1.93
PDLIM5-218ENST00000513341 ENSAO43768 121 aaKnown RBP2.97□□□□□ -1.93
PDLIM5-218ENST00000513341 SCN2BO60939 215 aa2.97□□□□□ -1.93
PDLIM5-218ENST00000513341 NPIPB7O75200 414 aa2.97□□□□□ -1.93
PDLIM5-218ENST00000513341 SEC22BO75396 215 aa2.97□□□□□ -1.93
PDLIM5-218ENST00000513341 PIAS1O75925 651 aa2.97□□□□□ -1.93
PDLIM5-218ENST00000513341 IGHV1-69P01742 117 aa2.97□□□□□ -1.93
PDLIM5-218ENST00000513341 IFNW1P05000 195 aa2.97□□□□□ -1.93
PDLIM5-218ENST00000513341 FBP1P09467 338 aa2.97□□□□□ -1.93
PDLIM5-218ENST00000513341 IGLL1P15814 213 aa2.97□□□□□ -1.93
PDLIM5-218ENST00000513341 RPS2P15880 293 aaKnown RBP2.97□□□□□ -1.93
PDLIM5-218ENST00000513341 TAC1P20366 129 aa2.97□□□□□ -1.93
PDLIM5-218ENST00000513341 AHCYP23526 432 aa2.97□□□□□ -1.93
PDLIM5-218ENST00000513341 TNFSF8P32971 234 aa2.97□□□□□ -1.93
PDLIM5-218ENST00000513341 RFX2P48378 723 aa2.97□□□□□ -1.93
PDLIM5-218ENST00000513341 CENPAP49450 140 aa2.97□□□□□ -1.93
PDLIM5-218ENST00000513341 ERVFC1-1P60608 527 aa2.97□□□□□ -1.93
PDLIM5-218ENST00000513341 FGF12P61328 243 aa2.97□□□□□ -1.93
PDLIM5-218ENST00000513341 SLC35A2P78381 396 aa2.97□□□□□ -1.93
PDLIM5-218ENST00000513341 C1DQ13901 141 aaKnown RBP2.97□□□□□ -1.93
PDLIM5-218ENST00000513341 GNA13Q14344 377 aa2.97□□□□□ -1.93
PDLIM5-218ENST00000513341 FASTKD3Q14CZ7 662 aaKnown RBP2.97□□□□□ -1.93
PDLIM5-218ENST00000513341 ZMYND11Q15326 602 aa2.97□□□□□ -1.93
PDLIM5-218ENST00000513341 IMPG1Q17R60 797 aa2.97□□□□□ -1.93
PDLIM5-218ENST00000513341 TBC1D28Q2M2D7 210 aa2.97□□□□□ -1.93
PDLIM5-218ENST00000513341 ZNF181Q2M3W8 571 aa2.97□□□□□ -1.93
PDLIM5-218ENST00000513341 ALKBH6Q3KRA9 238 aa2.97□□□□□ -1.93
PDLIM5-218ENST00000513341 ATP6AP1LQ52LC2 224 aa2.97□□□□□ -1.93
PDLIM5-218ENST00000513341 ZNF678Q5SXM1 525 aa2.97□□□□□ -1.93
PDLIM5-218ENST00000513341 SLC27A4Q6P1M0 643 aa2.97□□□□□ -1.93
PDLIM5-218ENST00000513341 TMEM53Q6P2H8 277 aa2.97□□□□□ -1.93
PDLIM5-218ENST00000513341 METAP1DQ6UB28 335 aaPredicted RBP2.97□□□□□ -1.93
PDLIM5-218ENST00000513341 C5orf46Q6UWT4 87 aa2.97□□□□□ -1.93
PDLIM5-218ENST00000513341 ZNF584Q8IVC4 421 aa2.97□□□□□ -1.93
PDLIM5-218ENST00000513341 ZNF440Q8IYI8 595 aa2.97□□□□□ -1.93
PDLIM5-218ENST00000513341 TMEM123Q8N131 208 aa2.97□□□□□ -1.93
PDLIM5-218ENST00000513341 SLC30A7Q8NEW0 376 aa2.97□□□□□ -1.93
PDLIM5-218ENST00000513341 Q8NFD4 153 aa2.97□□□□□ -1.93
PDLIM5-218ENST00000513341 OR1J1Q8NGS3 322 aa2.97□□□□□ -1.93
PDLIM5-218ENST00000513341 CDC26Q8NHZ8 85 aa2.97□□□□□ -1.93
PDLIM5-218ENST00000513341 KIF18AQ8NI77 898 aa2.97□□□□□ -1.93
PDLIM5-218ENST00000513341 SFXN5Q8TD22 340 aa2.97□□□□□ -1.93
PDLIM5-218ENST00000513341 CIDECQ96AQ7 238 aaPredicted RBP2.97□□□□□ -1.93
PDLIM5-218ENST00000513341 RNF125Q96EQ8 232 aa2.97□□□□□ -1.93
PDLIM5-218ENST00000513341 DNAJA3Q96EY1 480 aa2.97□□□□□ -1.93
PDLIM5-218ENST00000513341 RSRC1Q96IZ7 334 aaKnown RBP2.97□□□□□ -1.93
PDLIM5-218ENST00000513341 MS4A14Q96JA4 679 aa2.97□□□□□ -1.93
PDLIM5-218ENST00000513341 TMEM237Q96Q45 408 aa2.97□□□□□ -1.93
PDLIM5-218ENST00000513341 TSPAN32Q96QS1 320 aa2.97□□□□□ -1.93
PDLIM5-218ENST00000513341 OR2M2Q96R28 347 aa2.97□□□□□ -1.93
PDLIM5-218ENST00000513341 OR7D2Q96RA2 312 aa2.97□□□□□ -1.93
PDLIM5-218ENST00000513341 CCT7Q99832 543 aa2.97□□□□□ -1.93
PDLIM5-218ENST00000513341 RHOXF2Q9BQY4 288 aa2.97□□□□□ -1.93
PDLIM5-218ENST00000513341 DESI2Q9BSY9 194 aa2.97□□□□□ -1.93
PDLIM5-218ENST00000513341 ZNF350Q9GZX5 532 aa2.97□□□□□ -1.93
PDLIM5-218ENST00000513341 MMP28Q9H239 520 aa2.97□□□□□ -1.93
PDLIM5-218ENST00000513341 MTHFD2LQ9H903 347 aaPredicted RBP2.97□□□□□ -1.93
PDLIM5-218ENST00000513341 MAP6D1Q9H9H5 199 aa2.97□□□□□ -1.93
PDLIM5-218ENST00000513341 CDH20Q9HBT6 801 aa2.97□□□□□ -1.93
PDLIM5-218ENST00000513341 RAB18Q9NP72 206 aa2.97□□□□□ -1.93
PDLIM5-218ENST00000513341 PALMDQ9NP74 551 aa2.97□□□□□ -1.93
PDLIM5-218ENST00000513341 ADPRHL2Q9NX46 363 aa2.97□□□□□ -1.93
PDLIM5-218ENST00000513341 ZNF224Q9NZL3 707 aa2.97□□□□□ -1.93
PDLIM5-218ENST00000513341 EIF3KQ9UBQ5 218 aaKnown RBP2.97□□□□□ -1.93
PDLIM5-218ENST00000513341 RNF14Q9UBS8 474 aa2.97□□□□□ -1.93
PDLIM5-218ENST00000513341 CLN8Q9UBY8 286 aa2.97□□□□□ -1.93
PDLIM5-218ENST00000513341 ATP6V1HQ9UI12 483 aa2.97□□□□□ -1.93
PDLIM5-218ENST00000513341 MKLN1Q9UL63 735 aa2.97□□□□□ -1.93
PDLIM5-218ENST00000513341 FZR1Q9UM11 496 aa2.97□□□□□ -1.93
PDLIM5-218ENST00000513341 PPP1R3CQ9UQK1 317 aa2.97□□□□□ -1.93
PDLIM5-218ENST00000513341 TMED5Q9Y3A6 229 aa2.97□□□□□ -1.93
PDLIM5-218ENST00000513341 KCNE3Q9Y6H6 103 aa2.97□□□□□ -1.93
PDLIM5-218ENST00000513341 CFAP73A6NFT4 308 aa2.96□□□□□ -1.94
PDLIM5-218ENST00000513341 LRRC30A6NM36 301 aa2.96□□□□□ -1.94
PDLIM5-218ENST00000513341 ZNF726A6NNF4 738 aa2.96□□□□□ -1.94
PDLIM5-218ENST00000513341 A8MT66 165 aa2.96□□□□□ -1.94
PDLIM5-218ENST00000513341 FTCDNL1E5RQL4 147 aa2.96□□□□□ -1.94
PDLIM5-218ENST00000513341 M0R3G1 203 aa2.96□□□□□ -1.94
PDLIM5-218ENST00000513341 EBAG9O00559 213 aa2.96□□□□□ -1.94
PDLIM5-218ENST00000513341 HSPB6O14558 160 aa2.96□□□□□ -1.94
PDLIM5-218ENST00000513341 AIM2O14862 343 aa2.96□□□□□ -1.94
PDLIM5-218ENST00000513341 NDUFA2O43678 99 aa2.96□□□□□ -1.94
PDLIM5-218ENST00000513341 DOK2O60496 412 aa2.96□□□□□ -1.94
PDLIM5-218ENST00000513341 RAMP3O60896 148 aa2.96□□□□□ -1.94
PDLIM5-218ENST00000513341 LYPLA1O75608 230 aaPredicted RBP2.96□□□□□ -1.94
PDLIM5-218ENST00000513341 SLC22A3O75751 556 aa2.96□□□□□ -1.94
PDLIM5-218ENST00000513341 FARS2O95363 451 aaKnown RBP2.96□□□□□ -1.94
PDLIM5-218ENST00000513341 ECDO95905 644 aaPredicted RBP2.96□□□□□ -1.94
PDLIM5-218ENST00000513341 ACAA1P09110 424 aaPredicted RBP2.96□□□□□ -1.94
PDLIM5-218ENST00000513341 QDPRP09417 244 aa2.96□□□□□ -1.94
PDLIM5-218ENST00000513341 PNMTP11086 282 aa2.96□□□□□ -1.94
PDLIM5-218ENST00000513341 MMP9P14780 707 aa2.96□□□□□ -1.94
PDLIM5-218ENST00000513341 GTF2E2P29084 291 aaKnown RBP2.96□□□□□ -1.94
PDLIM5-218ENST00000513341 APLNRP35414 380 aa2.96□□□□□ -1.94
PDLIM5-218ENST00000513341 CFHR2P36980 270 aa2.96□□□□□ -1.94
PDLIM5-218ENST00000513341 PSMB10P40306 273 aa2.96□□□□□ -1.94
PDLIM5-218ENST00000513341 CRATP43155 626 aa2.96□□□□□ -1.94
PDLIM5-218ENST00000513341 VEGFCP49767 419 aa2.96□□□□□ -1.94
PDLIM5-218ENST00000513341 SERPINB8P50452 374 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms