RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 SNX6Q9UNH7 406 aa0.47□□□□□ -2.33
PDGFC-208ENST00000512711 MED13Q9UHV7 2174 aa0.47□□□□□ -2.33
PDGFC-208ENST00000512711 RP1L1Q8IWN7 2480 aaPredicted RBP0.47□□□□□ -2.33
PDGFC-208ENST00000512711 NOTCH1P46531 2555 aa0.47□□□□□ -2.33
PDGFC-208ENST00000512711 BRD4O60885 1362 aaPredicted RBP0.46□□□□□ -2.34
PDGFC-208ENST00000512711 PLXNA3P51805 1871 aa0.46□□□□□ -2.34
PDGFC-208ENST00000512711 GBF1Q92538 1859 aa0.46□□□□□ -2.34
PDGFC-208ENST00000512711 DYSFO75923 2080 aa0.46□□□□□ -2.34
PDGFC-208ENST00000512711 IGHV1-69DA0A0B4J2H0 117 aa0.46□□□□□ -2.34
PDGFC-208ENST00000512711 K7EMT4 169 aa0.46□□□□□ -2.34
PDGFC-208ENST00000512711 TNFRSF11BO00300 401 aa0.46□□□□□ -2.34
PDGFC-208ENST00000512711 CDC7O00311 574 aa0.46□□□□□ -2.34
PDGFC-208ENST00000512711 DBTP11182 482 aaKnown RBP0.46□□□□□ -2.34
PDGFC-208ENST00000512711 CTRB1P17538 263 aa0.46□□□□□ -2.34
PDGFC-208ENST00000512711 IFNA8P32881 189 aa0.46□□□□□ -2.34
PDGFC-208ENST00000512711 CCNHP51946 323 aaPredicted RBP0.46□□□□□ -2.34
PDGFC-208ENST00000512711 BPIFB3P59826 476 aa0.46□□□□□ -2.34
PDGFC-208ENST00000512711 PNOCQ13519 176 aa0.46□□□□□ -2.34
PDGFC-208ENST00000512711 CHRNA6Q15825 494 aa0.46□□□□□ -2.34
PDGFC-208ENST00000512711 ZNF141Q15928 474 aa0.46□□□□□ -2.34
PDGFC-208ENST00000512711 ZFAND6Q6FIF0 208 aa0.46□□□□□ -2.34
PDGFC-208ENST00000512711 SLC25A24Q6NUK1 477 aa0.46□□□□□ -2.34
PDGFC-208ENST00000512711 FAM131AQ6UXB0 335 aa0.46□□□□□ -2.34
PDGFC-208ENST00000512711 NPSR1Q6W5P4 371 aa0.46□□□□□ -2.34
PDGFC-208ENST00000512711 DCPSQ96C86 337 aaKnown RBP0.46□□□□□ -2.34
PDGFC-208ENST00000512711 MICU1Q9BPX6 476 aa0.46□□□□□ -2.34
PDGFC-208ENST00000512711 NUDT9Q9BW91 350 aa0.46□□□□□ -2.34
PDGFC-208ENST00000512711 TAS2R5Q9NYW4 299 aa0.46□□□□□ -2.34
PDGFC-208ENST00000512711 STRCP1A6NGW2 1772 aa0.46□□□□□ -2.34
PDGFC-208ENST00000512711 SSH2Q76I76 1423 aa0.46□□□□□ -2.34
PDGFC-208ENST00000512711 PCDH11XQ9BZA7 1347 aa0.45□□□□□ -2.34
PDGFC-208ENST00000512711 A0A1B0GUH1 482 aa0.45□□□□□ -2.34
PDGFC-208ENST00000512711 H7C1H1 209 aa0.45□□□□□ -2.34
PDGFC-208ENST00000512711 ANGPT2O15123 496 aa0.45□□□□□ -2.34
PDGFC-208ENST00000512711 ZNF73O43830 326 aaPredicted RBP0.45□□□□□ -2.34
PDGFC-208ENST00000512711 KLHL41O60662 606 aa0.45□□□□□ -2.34
PDGFC-208ENST00000512711 TSPAN13O95857 204 aa0.45□□□□□ -2.34
PDGFC-208ENST00000512711 SERPIND1P05546 499 aa0.45□□□□□ -2.34
PDGFC-208ENST00000512711 MMP7P09237 267 aaPredicted RBP0.45□□□□□ -2.34
PDGFC-208ENST00000512711 CBR1P16152 277 aa0.45□□□□□ -2.34
PDGFC-208ENST00000512711 U2AF2P26368 475 aaKnown RBP eCLIP0.45□□□□□ -2.34
PDGFC-208ENST00000512711 HLA-DMAP28067 261 aa0.45□□□□□ -2.34
PDGFC-208ENST00000512711 TAS2R43P59537 309 aa0.45□□□□□ -2.34
PDGFC-208ENST00000512711 PPIDQ08752 370 aaKnown RBP0.45□□□□□ -2.34
PDGFC-208ENST00000512711 TGFBIQ15582 683 aa0.45□□□□□ -2.34
PDGFC-208ENST00000512711 KRTAP25-1Q3LHN0 102 aa0.45□□□□□ -2.34
PDGFC-208ENST00000512711 C6orf226Q5I0X4 101 aa0.45□□□□□ -2.34
PDGFC-208ENST00000512711 ZNF660Q6AZW8 331 aaPredicted RBP0.45□□□□□ -2.34
PDGFC-208ENST00000512711 CCDC73Q6ZRK6 1079 aa0.45□□□□□ -2.34
PDGFC-208ENST00000512711 LRRC75A-AS1Q8N1F1 130 aa0.45□□□□□ -2.34
PDGFC-208ENST00000512711 CHST4Q8NCG5 386 aa0.45□□□□□ -2.34
PDGFC-208ENST00000512711 OR2Z1Q8NG97 314 aa0.45□□□□□ -2.34
PDGFC-208ENST00000512711 OR2A1Q8NGT9 310 aa0.45□□□□□ -2.34
PDGFC-208ENST00000512711 ACTL9Q8TC94 416 aa0.45□□□□□ -2.34
PDGFC-208ENST00000512711 RNF145Q96MT1 663 aa0.45□□□□□ -2.34
PDGFC-208ENST00000512711 OR2V2Q96R30 315 aa0.45□□□□□ -2.34
PDGFC-208ENST00000512711 DYRK4Q9NR20 520 aa0.45□□□□□ -2.34
PDGFC-208ENST00000512711 PDP1Q9P0J1 537 aaPredicted RBP0.45□□□□□ -2.34
PDGFC-208ENST00000512711 RWDD2AQ9UIY3 292 aa0.45□□□□□ -2.34
PDGFC-208ENST00000512711 DOCK10Q96BY6 2186 aa0.45□□□□□ -2.34
PDGFC-208ENST00000512711 GPR98Q8WXG9 6306 aa0.44□□□□□ -2.34
PDGFC-208ENST00000512711 CLRN2A0PK11 232 aa0.44□□□□□ -2.34
PDGFC-208ENST00000512711 MT-ND4P03905 459 aa0.44□□□□□ -2.34
PDGFC-208ENST00000512711 PRKACBP22694 351 aa0.44□□□□□ -2.34
PDGFC-208ENST00000512711 CD70P32970 193 aa0.44□□□□□ -2.34
PDGFC-208ENST00000512711 NDUFA8P51970 172 aa0.44□□□□□ -2.34
PDGFC-208ENST00000512711 FMODQ06828 376 aa0.44□□□□□ -2.34
PDGFC-208ENST00000512711 ILKQ13418 452 aa0.44□□□□□ -2.34
PDGFC-208ENST00000512711 PDZD11Q5EBL8 140 aa0.44□□□□□ -2.34
PDGFC-208ENST00000512711 C1orf185Q5T7R7 199 aa0.44□□□□□ -2.34
PDGFC-208ENST00000512711 APOBEC3HQ6NTF7 200 aaKnown RBP0.44□□□□□ -2.34
PDGFC-208ENST00000512711 C12orf54Q6X4T0 127 aa0.44□□□□□ -2.34
PDGFC-208ENST00000512711 TMEM150AQ86TG1 271 aa0.44□□□□□ -2.34
PDGFC-208ENST00000512711 TICAM2Q86XR7 235 aa0.44□□□□□ -2.34
PDGFC-208ENST00000512711 STEAP2Q8NFT2 490 aa0.44□□□□□ -2.34
PDGFC-208ENST00000512711 OR52E2Q8NGJ4 325 aa0.44□□□□□ -2.34
PDGFC-208ENST00000512711 OR4C13Q8NGP0 309 aa0.44□□□□□ -2.34
PDGFC-208ENST00000512711 OR10G6Q8NH81 332 aa0.44□□□□□ -2.34
PDGFC-208ENST00000512711 EEF1AKMT3Q96AZ1 226 aa0.44□□□□□ -2.34
PDGFC-208ENST00000512711 C16orf45Q96MC5 204 aaPredicted RBP0.44□□□□□ -2.34
PDGFC-208ENST00000512711 GON7Q9BXV9 100 aa0.44□□□□□ -2.34
PDGFC-208ENST00000512711 VSIRQ9H7M9 311 aa0.44□□□□□ -2.34
PDGFC-208ENST00000512711 ZNF442Q9H7R0 627 aa0.44□□□□□ -2.34
PDGFC-208ENST00000512711 ETNK2Q9NVF9 386 aa0.44□□□□□ -2.34
PDGFC-208ENST00000512711 SH3BGRL2Q9UJC5 107 aa0.44□□□□□ -2.34
PDGFC-208ENST00000512711 NUP50Q9UKX7 468 aa0.44□□□□□ -2.34
PDGFC-208ENST00000512711 CLEC4AQ9UMR7 237 aa0.44□□□□□ -2.34
PDGFC-208ENST00000512711 COL4A1P02462 1669 aa0.43□□□□□ -2.34
PDGFC-208ENST00000512711 NCBP2LA6PVI3 153 aaKnown RBP0.43□□□□□ -2.34
PDGFC-208ENST00000512711 SMKR1H3BMG3 65 aa0.43□□□□□ -2.34
PDGFC-208ENST00000512711 MAGEB3O15480 346 aa0.43□□□□□ -2.34
PDGFC-208ENST00000512711 NMT2O60551 498 aa0.43□□□□□ -2.34
PDGFC-208ENST00000512711 FKBP6O75344 327 aa0.43□□□□□ -2.34
PDGFC-208ENST00000512711 B3GALNT1O75752 331 aa0.43□□□□□ -2.34
PDGFC-208ENST00000512711 IGHG2P01859 326 aa0.43□□□□□ -2.34
PDGFC-208ENST00000512711 ZNF43P17038 809 aa0.43□□□□□ -2.34
PDGFC-208ENST00000512711 NELFEP18615 380 aaKnown RBP0.43□□□□□ -2.34
PDGFC-208ENST00000512711 HNRNPH3P31942 346 aaKnown RBP0.43□□□□□ -2.34
PDGFC-208ENST00000512711 TALDO1P37837 337 aa0.43□□□□□ -2.34
PDGFC-208ENST00000512711 NSG1P42857 185 aa0.43□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms