RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 BIN3Q9NQY0 253 aa4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 SLC17A5Q9NRA2 495 aa4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 PLSCR3Q9NRY6 295 aa4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 CLN6Q9NWW5 311 aa4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 TMEM216Q9P0N5 145 aa4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 GMPR2Q9P2T1 348 aaKnown RBP4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 ELF5Q9UKW6 265 aaPredicted RBP4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 TCF19Q9Y242 345 aa4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 SPTBN2O15020 2390 aa4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 FAM187AA6NFU0 413 aa4.44□□□□□ -1.7
TRAPPC11-208ENST00000511955 HACD1B0YJ81 288 aa4.44□□□□□ -1.7
TRAPPC11-208ENST00000511955 PATE3B3GLJ2 98 aa4.44□□□□□ -1.7
TRAPPC11-208ENST00000511955 J3QLI3 93 aa4.44□□□□□ -1.7
TRAPPC11-208ENST00000511955 RGS5O15539 181 aa4.44□□□□□ -1.7
TRAPPC11-208ENST00000511955 HPGDSO60760 199 aa4.44□□□□□ -1.7
TRAPPC11-208ENST00000511955 KCNK2O95069 426 aa4.44□□□□□ -1.7
TRAPPC11-208ENST00000511955 SEMA4FO95754 770 aa4.44□□□□□ -1.7
TRAPPC11-208ENST00000511955 FUT3P21217 361 aa4.44□□□□□ -1.7
TRAPPC11-208ENST00000511955 KITLGP21583 273 aa4.44□□□□□ -1.7
TRAPPC11-208ENST00000511955 GABRR1P24046 479 aa4.44□□□□□ -1.7
TRAPPC11-208ENST00000511955 IVDP26440 423 aa4.44□□□□□ -1.7
TRAPPC11-208ENST00000511955 SLC6A1P30531 599 aa4.44□□□□□ -1.7
TRAPPC11-208ENST00000511955 KIR2DL2P43627 348 aaPredicted RBP4.44□□□□□ -1.7
TRAPPC11-208ENST00000511955 HTR5AP47898 357 aa4.44□□□□□ -1.7
TRAPPC11-208ENST00000511955 AGTR2P50052 363 aa4.44□□□□□ -1.7
TRAPPC11-208ENST00000511955 RAB7AP51149 207 aa4.44□□□□□ -1.7
TRAPPC11-208ENST00000511955 FUT6P51993 359 aa4.44□□□□□ -1.7
TRAPPC11-208ENST00000511955 STXBP1P61764 594 aaKnown RBP4.44□□□□□ -1.7
TRAPPC11-208ENST00000511955 SNRPEP62304 92 aaKnown RBP4.44□□□□□ -1.7
TRAPPC11-208ENST00000511955 IFITM3Q01628 133 aa4.44□□□□□ -1.7
TRAPPC11-208ENST00000511955 IKZF1Q13422 519 aa4.44□□□□□ -1.7
TRAPPC11-208ENST00000511955 CEACAM7Q14002 265 aa4.44□□□□□ -1.7
TRAPPC11-208ENST00000511955 MELKQ14680 651 aa4.44□□□□□ -1.7
TRAPPC11-208ENST00000511955 ZNF169Q14929 603 aaPredicted RBP4.44□□□□□ -1.7
TRAPPC11-208ENST00000511955 EXOSC7Q15024 291 aaKnown RBP4.44□□□□□ -1.7
TRAPPC11-208ENST00000511955 CYP51A1Q16850 503 aa4.44□□□□□ -1.7
TRAPPC11-208ENST00000511955 NSUN5P2Q63ZY6 315 aa4.44□□□□□ -1.7
TRAPPC11-208ENST00000511955 LEMD1Q68G75 181 aa4.44□□□□□ -1.7
TRAPPC11-208ENST00000511955 GRINAQ7Z429 371 aa4.44□□□□□ -1.7
TRAPPC11-208ENST00000511955 MARCH9Q86YJ5 346 aa4.44□□□□□ -1.7
TRAPPC11-208ENST00000511955 TRIM48Q8IWZ4 208 aa4.44□□□□□ -1.7
TRAPPC11-208ENST00000511955 OR9Q1Q8NGQ5 310 aa4.44□□□□□ -1.7
TRAPPC11-208ENST00000511955 ZFAND1Q8TCF1 268 aa4.44□□□□□ -1.7
TRAPPC11-208ENST00000511955 SFXN5Q8TD22 340 aa4.44□□□□□ -1.7
TRAPPC11-208ENST00000511955 SLC38A5Q8WUX1 472 aa4.44□□□□□ -1.7
TRAPPC11-208ENST00000511955 ZHX1-C8orf76Q96EF9 292 aa4.44□□□□□ -1.7
TRAPPC11-208ENST00000511955 DCLRE1CQ96SD1 692 aaKnown RBP4.44□□□□□ -1.7
TRAPPC11-208ENST00000511955 ARRDC1-AS1Q9H2J1 176 aa4.44□□□□□ -1.7
TRAPPC11-208ENST00000511955 TMEM74BQ9NUR3 256 aa4.44□□□□□ -1.7
TRAPPC11-208ENST00000511955 RNF6Q9Y252 685 aa4.44□□□□□ -1.7
TRAPPC11-208ENST00000511955 UFC1Q9Y3C8 167 aa4.44□□□□□ -1.7
TRAPPC11-208ENST00000511955 CEP250Q9BV73 2442 aa4.44□□□□□ -1.7
TRAPPC11-208ENST00000511955 MUC22E2RYF6 1773 aaPredicted RBP4.44□□□□□ -1.7
TRAPPC11-208ENST00000511955 OTOGLQ3ZCN5 2332 aa4.44□□□□□ -1.7
TRAPPC11-208ENST00000511955 FAM186AA6NE01 2351 aa4.44□□□□□ -1.7
TRAPPC11-208ENST00000511955 A0A1W2PRD5 423 aa4.44□□□□□ -1.7
TRAPPC11-208ENST00000511955 A0A1W2PRF3 423 aa4.44□□□□□ -1.7
TRAPPC11-208ENST00000511955 A0A1W2PRM7 423 aa4.44□□□□□ -1.7
TRAPPC11-208ENST00000511955 TCRBV7S3A2A0A539 114 aa4.44□□□□□ -1.7
TRAPPC11-208ENST00000511955 TMEM8BA6NDV4 472 aa4.44□□□□□ -1.7
TRAPPC11-208ENST00000511955 H3BMH7 237 aa4.44□□□□□ -1.7
TRAPPC11-208ENST00000511955 EIF4EBP3O60516 100 aaPredicted RBP4.44□□□□□ -1.7
TRAPPC11-208ENST00000511955 CTSVO60911 334 aa4.44□□□□□ -1.7
TRAPPC11-208ENST00000511955 NDUFA7O95182 113 aa4.44□□□□□ -1.7
TRAPPC11-208ENST00000511955 TMEM50AO95807 157 aa4.44□□□□□ -1.7
TRAPPC11-208ENST00000511955 PAK4O96013 591 aaPredicted RBP4.44□□□□□ -1.7
TRAPPC11-208ENST00000511955 AVPP01185 164 aa4.44□□□□□ -1.7
TRAPPC11-208ENST00000511955 TYMSP04818 313 aa4.44□□□□□ -1.7
TRAPPC11-208ENST00000511955 HTR1AP08908 422 aa4.44□□□□□ -1.7
TRAPPC11-208ENST00000511955 ZSCAN5DPP0CG00 497 aa4.44□□□□□ -1.7
TRAPPC11-208ENST00000511955 MGMTP16455 207 aa4.44□□□□□ -1.7
TRAPPC11-208ENST00000511955 ANOS1P23352 680 aa4.44□□□□□ -1.7
TRAPPC11-208ENST00000511955 GDF1P27539 372 aa4.44□□□□□ -1.7
TRAPPC11-208ENST00000511955 IL12AP29459 219 aa4.44□□□□□ -1.7
TRAPPC11-208ENST00000511955 FMO3P31513 532 aa4.44□□□□□ -1.7
TRAPPC11-208ENST00000511955 CEACAM8P31997 349 aaPredicted RBP4.44□□□□□ -1.7
TRAPPC11-208ENST00000511955 GLP1RP43220 463 aa4.44□□□□□ -1.7
TRAPPC11-208ENST00000511955 PPOXP50336 477 aa4.44□□□□□ -1.7
TRAPPC11-208ENST00000511955 DNAJB13P59910 316 aa4.44□□□□□ -1.7
TRAPPC11-208ENST00000511955 C1orf61Q13536 156 aa4.44□□□□□ -1.7
TRAPPC11-208ENST00000511955 IHHQ14623 411 aa4.44□□□□□ -1.7
TRAPPC11-208ENST00000511955 KCNJ11Q14654 390 aa4.44□□□□□ -1.7
TRAPPC11-208ENST00000511955 PLK5Q496M5 336 aa4.44□□□□□ -1.7
TRAPPC11-208ENST00000511955 AGBL4Q5VU57 503 aa4.44□□□□□ -1.7
TRAPPC11-208ENST00000511955 PRR27Q6MZM9 219 aa4.44□□□□□ -1.7
TRAPPC11-208ENST00000511955 TMPRSS11FQ6ZWK6 438 aa4.44□□□□□ -1.7
TRAPPC11-208ENST00000511955 MDGA2Q7Z553 956 aa4.44□□□□□ -1.7
TRAPPC11-208ENST00000511955 CTAGE3PQ8IX95 158 aa4.44□□□□□ -1.7
TRAPPC11-208ENST00000511955 ZNF567Q8N184 647 aa4.44□□□□□ -1.7
TRAPPC11-208ENST00000511955 OR10V1Q8NGI7 309 aa4.44□□□□□ -1.7
TRAPPC11-208ENST00000511955 ASB17Q8WXJ9 295 aa4.44□□□□□ -1.7
TRAPPC11-208ENST00000511955 RAB8BQ92930 207 aa4.44□□□□□ -1.7
TRAPPC11-208ENST00000511955 Q96MT0 163 aa4.44□□□□□ -1.7
TRAPPC11-208ENST00000511955 OR6C1Q96RD1 312 aa4.44□□□□□ -1.7
TRAPPC11-208ENST00000511955 KLF6Q99612 283 aaPredicted RBP4.44□□□□□ -1.7
TRAPPC11-208ENST00000511955 THAP7Q9BT49 309 aaPredicted RBP4.44□□□□□ -1.7
TRAPPC11-208ENST00000511955 TMEM208Q9BTX3 173 aa4.44□□□□□ -1.7
TRAPPC11-208ENST00000511955 THTPAQ9BU02 230 aa4.44□□□□□ -1.7
TRAPPC11-208ENST00000511955 MED18Q9BUE0 208 aa4.44□□□□□ -1.7
TRAPPC11-208ENST00000511955 CDCP1Q9H5V8 836 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms