RNA–Protein interactions for RNA: ENST00000510558.6

SNF8-209, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 1,051 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-209ENST00000510558 THTPAQ9BU02 230 aa19.35■□□□□ 0.69
SNF8-209ENST00000510558 RBM4Q9BWF3 364 aaKnown RBP19.35■□□□□ 0.69
SNF8-209ENST00000510558 COMMD3-BMI1R4GMX3 469 aa19.35■□□□□ 0.69
SNF8-209ENST00000510558 J3QLI3 93 aa19.34■□□□□ 0.69
SNF8-209ENST00000510558 M0R135 149 aa19.34■□□□□ 0.69
SNF8-209ENST00000510558 ACOT8O14734 319 aa19.34■□□□□ 0.69
SNF8-209ENST00000510558 PSKH1P11801 424 aa19.34■□□□□ 0.69
SNF8-209ENST00000510558 GATA3P23771 443 aa19.34■□□□□ 0.69
SNF8-209ENST00000510558 SRP9P49458 86 aaKnown RBP19.34■□□□□ 0.69
SNF8-209ENST00000510558 MALLQ13021 153 aa19.34■□□□□ 0.69
SNF8-209ENST00000510558 GK2Q14410 553 aaPredicted RBP19.34■□□□□ 0.69
SNF8-209ENST00000510558 ZMYND11Q15326 602 aa19.34■□□□□ 0.69
SNF8-209ENST00000510558 LRRC28Q86X40 367 aaPredicted RBP19.34■□□□□ 0.69
SNF8-209ENST00000510558 KLHL36Q8N4N3 616 aa19.34■□□□□ 0.69
SNF8-209ENST00000510558 OR2T33Q8NG76 320 aa19.34■□□□□ 0.69
SNF8-209ENST00000510558 OR10G2Q8NGC3 310 aa19.34■□□□□ 0.69
SNF8-209ENST00000510558 SPTSSAQ969W0 71 aa19.34■□□□□ 0.69
SNF8-209ENST00000510558 ZNF799Q96GE5 643 aa19.34■□□□□ 0.69
SNF8-209ENST00000510558 DDX28Q9NUL7 540 aaKnown RBP19.34■□□□□ 0.69
SNF8-209ENST00000510558 F5H5P2 479 aa19.33■□□□□ 0.68
SNF8-209ENST00000510558 TMEM178BH3BS89 294 aa19.33■□□□□ 0.68
SNF8-209ENST00000510558 IFNL4K9M1U5 179 aa19.33■□□□□ 0.68
SNF8-209ENST00000510558 FOXH1O75593 365 aa19.33■□□□□ 0.68
SNF8-209ENST00000510558 GYPBP06028 91 aa19.33■□□□□ 0.68
SNF8-209ENST00000510558 GK3PQ14409 553 aa19.33■□□□□ 0.68
SNF8-209ENST00000510558 C1QL2Q7Z5L3 287 aa19.33■□□□□ 0.68
SNF8-209ENST00000510558 ADGRG5Q8IZF4 528 aa19.33■□□□□ 0.68
SNF8-209ENST00000510558 ZNF420Q8TAQ5 688 aaPredicted RBP19.33■□□□□ 0.68
SNF8-209ENST00000510558 NIPSNAP1Q9BPW8 284 aa19.33■□□□□ 0.68
SNF8-209ENST00000510558 NMNAT2Q9BZQ4 307 aa19.33■□□□□ 0.68
SNF8-209ENST00000510558 PATZ1Q9HBE1 687 aaKnown RBP19.33■□□□□ 0.68
SNF8-209ENST00000510558 TMEM100Q9NV29 134 aa19.33■□□□□ 0.68
SNF8-209ENST00000510558 A0A0A6YYJ9 748 aa19.32■□□□□ 0.68
SNF8-209ENST00000510558 A0A1B0GWJ7 208 aa19.32■□□□□ 0.68
SNF8-209ENST00000510558 CST1P01037 141 aa19.32■□□□□ 0.68
SNF8-209ENST00000510558 SPARCP09486 303 aa19.32■□□□□ 0.68
SNF8-209ENST00000510558 SPI1P17947 270 aa19.32■□□□□ 0.68
SNF8-209ENST00000510558 EPHA1P21709 976 aa19.32■□□□□ 0.68
SNF8-209ENST00000510558 ZFP36P26651 326 aaKnown RBP19.32■□□□□ 0.68
SNF8-209ENST00000510558 FMO3P31513 532 aa19.32■□□□□ 0.68
SNF8-209ENST00000510558 SLC6A9P48067 706 aa19.32■□□□□ 0.68
SNF8-209ENST00000510558 ENTPD1P49961 510 aa19.32■□□□□ 0.68
SNF8-209ENST00000510558 SLC25A1P53007 311 aa19.32■□□□□ 0.68
SNF8-209ENST00000510558 CD300LDQ6UXZ3 194 aa19.32■□□□□ 0.68
SNF8-209ENST00000510558 DCXRQ7Z4W1 244 aa19.32■□□□□ 0.68
SNF8-209ENST00000510558 ZNF511Q8NB15 262 aa19.32■□□□□ 0.68
SNF8-209ENST00000510558 GIPC3Q8TF64 312 aa19.32■□□□□ 0.68
SNF8-209ENST00000510558 SLCO4A1Q96BD0 722 aa19.32■□□□□ 0.68
SNF8-209ENST00000510558 CHID1Q9BWS9 393 aa19.32■□□□□ 0.68
SNF8-209ENST00000510558 IGHV3-64DA0A0J9YX35 117 aa19.31■□□□□ 0.68
SNF8-209ENST00000510558 VENTXO95231 258 aa19.31■□□□□ 0.68
SNF8-209ENST00000510558 IFNGP01579 166 aa19.31■□□□□ 0.68
SNF8-209ENST00000510558 HLA-DPB1P04440 258 aa19.31■□□□□ 0.68
SNF8-209ENST00000510558 CLUP10909 449 aa19.31■□□□□ 0.68
SNF8-209ENST00000510558 ADRA2CP18825 462 aa19.31■□□□□ 0.68
SNF8-209ENST00000510558 OTX1P32242 354 aaPredicted RBP19.31■□□□□ 0.68
SNF8-209ENST00000510558 MDH2P40926 338 aaKnown RBP19.31■□□□□ 0.68
SNF8-209ENST00000510558 PGAP1Q75T13 922 aa19.31■□□□□ 0.68
SNF8-209ENST00000510558 TRPM8Q7Z2W7 1104 aa19.31■□□□□ 0.68
SNF8-209ENST00000510558 MRPL21Q7Z2W9 205 aaKnown RBP19.31■□□□□ 0.68
SNF8-209ENST00000510558 MUC20Q8N307 709 aaPredicted RBP19.31■□□□□ 0.68
SNF8-209ENST00000510558 TEX47Q8TBZ9 253 aa19.31■□□□□ 0.68
SNF8-209ENST00000510558 C7orf69Q9H7B7 122 aa19.31■□□□□ 0.68
SNF8-209ENST00000510558 PPIAL4EA0A075B759 164 aa19.3■□□□□ 0.68
SNF8-209ENST00000510558 PPIAL4CA0A0B4J2A2 164 aa19.3■□□□□ 0.68
SNF8-209ENST00000510558 AQP12BA6NM10 295 aa19.3■□□□□ 0.68
SNF8-209ENST00000510558 RIIAD1A6NNX1 92 aa19.3■□□□□ 0.68
SNF8-209ENST00000510558 F5H0A9 414 aaPredicted RBP19.3■□□□□ 0.68
SNF8-209ENST00000510558 PPIAL4DF5H284 164 aa19.3■□□□□ 0.68
SNF8-209ENST00000510558 CYB5R3P00387 301 aaPredicted RBP19.3■□□□□ 0.68
SNF8-209ENST00000510558 PPIAL4FP0DN26 164 aa19.3■□□□□ 0.68
SNF8-209ENST00000510558 ZNF3P17036 446 aa19.3■□□□□ 0.68
SNF8-209ENST00000510558 PCK2Q16822 640 aa19.3■□□□□ 0.68
SNF8-209ENST00000510558 SNAI3Q3KNW1 292 aa19.3■□□□□ 0.68
SNF8-209ENST00000510558 DRAM2Q6UX65 266 aa19.3■□□□□ 0.68
SNF8-209ENST00000510558 MOGAT3Q86VF5 341 aa19.3■□□□□ 0.68
SNF8-209ENST00000510558 AQP12AQ8IXF9 295 aa19.3■□□□□ 0.68
SNF8-209ENST00000510558 OR6K6Q8NGW6 343 aa19.3■□□□□ 0.68
SNF8-209ENST00000510558 ZNF418Q8TF45 676 aaPredicted RBP19.3■□□□□ 0.68
SNF8-209ENST00000510558 CANT1Q8WVQ1 401 aa19.3■□□□□ 0.68
SNF8-209ENST00000510558 FEVQ99581 238 aa19.3■□□□□ 0.68
SNF8-209ENST00000510558 COPS4Q9BT78 406 aa19.3■□□□□ 0.68
SNF8-209ENST00000510558 CMC2Q9NRP2 79 aa19.3■□□□□ 0.68
SNF8-209ENST00000510558 DHRS12A0PJE2 317 aa19.29■□□□□ 0.68
SNF8-209ENST00000510558 ARRDC5A6NEK1 342 aa19.29■□□□□ 0.68
SNF8-209ENST00000510558 ZNF593O00488 134 aaPredicted RBP19.29■□□□□ 0.68
SNF8-209ENST00000510558 ANOS1P23352 680 aa19.29■□□□□ 0.68
SNF8-209ENST00000510558 SEC61A1P61619 476 aaKnown RBP19.29■□□□□ 0.68
SNF8-209ENST00000510558 ZNF181Q2M3W8 571 aa19.29■□□□□ 0.68
SNF8-209ENST00000510558 TEX30Q5JUR7 227 aa19.29■□□□□ 0.68
SNF8-209ENST00000510558 IQCF1Q8N6M8 205 aa19.29■□□□□ 0.68
SNF8-209ENST00000510558 SEMA6DQ8NFY4 1073 aa19.29■□□□□ 0.68
SNF8-209ENST00000510558 NANPQ8TBE9 248 aa19.29■□□□□ 0.68
SNF8-209ENST00000510558 SPRYD4Q8WW59 207 aaPredicted RBP19.29■□□□□ 0.68
SNF8-209ENST00000510558 SLAMF6Q96DU3 332 aa19.29■□□□□ 0.68
SNF8-209ENST00000510558 MMP26Q9NRE1 261 aa19.29■□□□□ 0.68
SNF8-209ENST00000510558 CENPMQ9NSP4 180 aa19.29■□□□□ 0.68
SNF8-209ENST00000510558 OPN4Q9UHM6 478 aa19.29■□□□□ 0.68
SNF8-209ENST00000510558 POLR3KQ9Y2Y1 108 aaPredicted RBP19.29■□□□□ 0.68
SNF8-209ENST00000510558 DOCK11Q5JSL3 2073 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms