RNA–Protein interactions for RNA: ENST00000508274.5

RAB28-205, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB28, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-205ENST00000508274 MMP26Q9NRE1 261 aa12.01□□□□□ -0.49
RAB28-205ENST00000508274 ARMC1Q9NVT9 282 aa12.01□□□□□ -0.49
RAB28-205ENST00000508274 SAMHD1Q9Y3Z3 626 aaKnown RBP12.01□□□□□ -0.49
RAB28-205ENST00000508274 COMMD3-BMI1R4GMX3 469 aa12.01□□□□□ -0.49
RAB28-205ENST00000508274 DOCK11Q5JSL3 2073 aa12□□□□□ -0.49
RAB28-205ENST00000508274 C5orf63A6NC05 138 aa12□□□□□ -0.49
RAB28-205ENST00000508274 J3QLI3 93 aa12□□□□□ -0.49
RAB28-205ENST00000508274 FAM107AO95990 144 aa12□□□□□ -0.49
RAB28-205ENST00000508274 LCATP04180 440 aa12□□□□□ -0.49
RAB28-205ENST00000508274 CLUP10909 449 aa12□□□□□ -0.49
RAB28-205ENST00000508274 ZNF823P16415 610 aa12□□□□□ -0.49
RAB28-205ENST00000508274 CALB2P22676 271 aa12□□□□□ -0.49
RAB28-205ENST00000508274 CRMP1Q14194 572 aa12□□□□□ -0.49
RAB28-205ENST00000508274 SNAI3Q3KNW1 292 aa12□□□□□ -0.49
RAB28-205ENST00000508274 OR2T5Q6IEZ7 315 aa12□□□□□ -0.49
RAB28-205ENST00000508274 MOGAT3Q86VF5 341 aa12□□□□□ -0.49
RAB28-205ENST00000508274 ARHGAP24Q8N264 748 aa12□□□□□ -0.49
RAB28-205ENST00000508274 LNX2Q8N448 690 aa12□□□□□ -0.49
RAB28-205ENST00000508274 LINC00471Q8N535 108 aa12□□□□□ -0.49
RAB28-205ENST00000508274 SPICQ8N5J4 248 aa12□□□□□ -0.49
RAB28-205ENST00000508274 OR2T4Q8NH00 348 aa12□□□□□ -0.49
RAB28-205ENST00000508274 OR2T29Q8NH02 315 aa12□□□□□ -0.49
RAB28-205ENST00000508274 HCAR1Q9BXC0 346 aa12□□□□□ -0.49
RAB28-205ENST00000508274 MUC13Q9H3R2 512 aa12□□□□□ -0.49
RAB28-205ENST00000508274 TENM1Q9UKZ4 2725 aa11.99□□□□□ -0.49
RAB28-205ENST00000508274 CEACAM18A8MTB9 384 aa11.99□□□□□ -0.49
RAB28-205ENST00000508274 F5H0A9 414 aaPredicted RBP11.99□□□□□ -0.49
RAB28-205ENST00000508274 TRAPPC2LH3BP13 241 aa11.99□□□□□ -0.49
RAB28-205ENST00000508274 M0R135 149 aa11.99□□□□□ -0.49
RAB28-205ENST00000508274 FOXH1O75593 365 aa11.99□□□□□ -0.49
RAB28-205ENST00000508274 GATA3P23771 443 aa11.99□□□□□ -0.49
RAB28-205ENST00000508274 SLC6A9P48067 706 aa11.99□□□□□ -0.49
RAB28-205ENST00000508274 ECH1Q13011 328 aa11.99□□□□□ -0.49
RAB28-205ENST00000508274 FAM201AQ5SY85 155 aa11.99□□□□□ -0.49
RAB28-205ENST00000508274 ZNF511Q8NB15 262 aa11.99□□□□□ -0.49
RAB28-205ENST00000508274 CCDC197Q8NCU1 140 aa11.99□□□□□ -0.49
RAB28-205ENST00000508274 DEFB108BQ8NET1 73 aa11.99□□□□□ -0.49
RAB28-205ENST00000508274 C22orf15Q8WYQ4 148 aa11.99□□□□□ -0.49
RAB28-205ENST00000508274 SLCO4A1Q96BD0 722 aa11.99□□□□□ -0.49
RAB28-205ENST00000508274 ZNF799Q96GE5 643 aa11.99□□□□□ -0.49
RAB28-205ENST00000508274 SLC6A7Q99884 636 aa11.99□□□□□ -0.49
RAB28-205ENST00000508274 NIPSNAP1Q9BPW8 284 aa11.99□□□□□ -0.49
RAB28-205ENST00000508274 RBM4Q9BWF3 364 aaKnown RBP11.99□□□□□ -0.49
RAB28-205ENST00000508274 REEP1Q9H902 201 aa11.99□□□□□ -0.49
RAB28-205ENST00000508274 A0A0A6YYJ9 748 aa11.98□□□□□ -0.49
RAB28-205ENST00000508274 A0A1B0GWJ7 208 aa11.98□□□□□ -0.49
RAB28-205ENST00000508274 FSHBP01225 129 aa11.98□□□□□ -0.49
RAB28-205ENST00000508274 SPARCP09486 303 aa11.98□□□□□ -0.49
RAB28-205ENST00000508274 MDH2P40926 338 aaKnown RBP11.98□□□□□ -0.49
RAB28-205ENST00000508274 PMELP40967 661 aa11.98□□□□□ -0.49
RAB28-205ENST00000508274 SRP9P49458 86 aaKnown RBP11.98□□□□□ -0.49
RAB28-205ENST00000508274 HOXA4Q00056 320 aaPredicted RBP11.98□□□□□ -0.49
RAB28-205ENST00000508274 SCGB2A2Q13296 93 aa11.98□□□□□ -0.49
RAB28-205ENST00000508274 MICAQ29983 383 aa11.98□□□□□ -0.49
RAB28-205ENST00000508274 FAM98BQ52LJ0 330 aaKnown RBP11.98□□□□□ -0.49
RAB28-205ENST00000508274 SLC27A4Q6P1M0 643 aa11.98□□□□□ -0.49
RAB28-205ENST00000508274 DCXRQ7Z4W1 244 aa11.98□□□□□ -0.49
RAB28-205ENST00000508274 OR2AE1Q8NHA4 323 aa11.98□□□□□ -0.49
RAB28-205ENST00000508274 NANPQ8TBE9 248 aa11.98□□□□□ -0.49
RAB28-205ENST00000508274 ZNF418Q8TF45 676 aaPredicted RBP11.98□□□□□ -0.49
RAB28-205ENST00000508274 DGCR6LQ9BY27 220 aa11.98□□□□□ -0.49
RAB28-205ENST00000508274 DDX28Q9NUL7 540 aaKnown RBP11.98□□□□□ -0.49
RAB28-205ENST00000508274 TMEM100Q9NV29 134 aa11.98□□□□□ -0.49
RAB28-205ENST00000508274 TAS2R1Q9NYW7 299 aa11.98□□□□□ -0.49
RAB28-205ENST00000508274 KCNG2Q9UJ96 466 aa11.98□□□□□ -0.49
RAB28-205ENST00000508274 PRPF19Q9UMS4 504 aaKnown RBP11.98□□□□□ -0.49
RAB28-205ENST00000508274 SLC2A1P11166 492 aa11.97□□□□□ -0.49
RAB28-205ENST00000508274 SPI1P17947 270 aa11.97□□□□□ -0.49
RAB28-205ENST00000508274 OTX1P32242 354 aaPredicted RBP11.97□□□□□ -0.49
RAB28-205ENST00000508274 TPTEP56180 551 aa11.97□□□□□ -0.49
RAB28-205ENST00000508274 HILS1P60008 231 aa11.97□□□□□ -0.49
RAB28-205ENST00000508274 MAB21L1Q13394 359 aa11.97□□□□□ -0.49
RAB28-205ENST00000508274 PGAP1Q75T13 922 aa11.97□□□□□ -0.49
RAB28-205ENST00000508274 MRPL21Q7Z2W9 205 aaKnown RBP11.97□□□□□ -0.49
RAB28-205ENST00000508274 TEX29Q8N6K0 151 aa11.97□□□□□ -0.49
RAB28-205ENST00000508274 IQCF1Q8N6M8 205 aa11.97□□□□□ -0.49
RAB28-205ENST00000508274 OR2T33Q8NG76 320 aa11.97□□□□□ -0.49
RAB28-205ENST00000508274 OR10G2Q8NGC3 310 aa11.97□□□□□ -0.49
RAB28-205ENST00000508274 SPTSSAQ969W0 71 aa11.97□□□□□ -0.49
RAB28-205ENST00000508274 ZDHHC16Q969W1 377 aa11.97□□□□□ -0.49
RAB28-205ENST00000508274 ASB9Q96DX5 294 aa11.97□□□□□ -0.49
RAB28-205ENST00000508274 NMNAT2Q9BZQ4 307 aa11.97□□□□□ -0.49
RAB28-205ENST00000508274 PPIAL4EA0A075B759 164 aa11.96□□□□□ -0.49
RAB28-205ENST00000508274 PPIAL4CA0A0B4J2A2 164 aa11.96□□□□□ -0.49
RAB28-205ENST00000508274 FAM183AA6NL82 134 aa11.96□□□□□ -0.49
RAB28-205ENST00000508274 A8MXK9 166 aa11.96□□□□□ -0.49
RAB28-205ENST00000508274 PPIAL4DF5H284 164 aa11.96□□□□□ -0.49
RAB28-205ENST00000508274 ACOT8O14734 319 aa11.96□□□□□ -0.49
RAB28-205ENST00000508274 PPIAL4FP0DN26 164 aa11.96□□□□□ -0.49
RAB28-205ENST00000508274 RAP2AP10114 183 aa11.96□□□□□ -0.49
RAB28-205ENST00000508274 ENTPD1P49961 510 aa11.96□□□□□ -0.49
RAB28-205ENST00000508274 PRKXP51817 358 aa11.96□□□□□ -0.49
RAB28-205ENST00000508274 ZNF92Q03936 586 aa11.96□□□□□ -0.49
RAB28-205ENST00000508274 MALLQ13021 153 aa11.96□□□□□ -0.49
RAB28-205ENST00000508274 ESCO2Q56NI9 601 aa11.96□□□□□ -0.49
RAB28-205ENST00000508274 GLYATL3Q5SZD4 288 aa11.96□□□□□ -0.49
RAB28-205ENST00000508274 PRAMEF6Q5VXH4 476 aa11.96□□□□□ -0.49
RAB28-205ENST00000508274 SPATC1Q76KD6 591 aa11.96□□□□□ -0.49
RAB28-205ENST00000508274 ADGRG5Q8IZF4 528 aa11.96□□□□□ -0.49
RAB28-205ENST00000508274 MUC20Q8N307 709 aaPredicted RBP11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms