RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 MMP16P51512 607 aa17.31■□□□□ 0.36
USP53-203ENST00000507597 ZNF85Q03923 595 aa17.31■□□□□ 0.36
USP53-203ENST00000507597 CDONQ4KMG0 1287 aa17.31■□□□□ 0.36
USP53-203ENST00000507597 SYNPRQ8TBG9 265 aa17.31■□□□□ 0.36
USP53-203ENST00000507597 OR51B6Q9H340 312 aa17.31■□□□□ 0.36
USP53-203ENST00000507597 RGCCQ9H4X1 137 aa17.31■□□□□ 0.36
USP53-203ENST00000507597 SNX5Q9Y5X3 404 aa17.31■□□□□ 0.36
USP53-203ENST00000507597 B9A039 149 aa17.3■□□□□ 0.36
USP53-203ENST00000507597 LOC110117498-PIK3R3F6TDL0 507 aa17.3■□□□□ 0.36
USP53-203ENST00000507597 J3QLW9 94 aa17.3■□□□□ 0.36
USP53-203ENST00000507597 PSMD9O00233 223 aa17.3■□□□□ 0.36
USP53-203ENST00000507597 MYL12BO14950 172 aa17.3■□□□□ 0.36
USP53-203ENST00000507597 TBX1O43435 398 aa17.3■□□□□ 0.36
USP53-203ENST00000507597 MRPS14O60783 128 aaKnown RBP17.3■□□□□ 0.36
USP53-203ENST00000507597 ZNF19P17023 458 aa17.3■□□□□ 0.36
USP53-203ENST00000507597 TTKP33981 857 aa17.3■□□□□ 0.36
USP53-203ENST00000507597 THBS4P35443 961 aa17.3■□□□□ 0.36
USP53-203ENST00000507597 GBX2P52951 348 aaPredicted RBP17.3■□□□□ 0.36
USP53-203ENST00000507597 ZNF121P58317 390 aaPredicted RBP17.3■□□□□ 0.36
USP53-203ENST00000507597 TIGD6Q17RP2 521 aa17.3■□□□□ 0.36
USP53-203ENST00000507597 RSPO1Q2MKA7 263 aaPredicted RBP17.3■□□□□ 0.36
USP53-203ENST00000507597 LAIR2Q6ISS4 152 aa17.3■□□□□ 0.36
USP53-203ENST00000507597 MUC15Q8N387 334 aa17.3■□□□□ 0.36
USP53-203ENST00000507597 TTTY10Q9BZA0 68 aa17.3■□□□□ 0.36
USP53-203ENST00000507597 PLK3Q9H4B4 646 aa17.3■□□□□ 0.36
USP53-203ENST00000507597 MRM2Q9UI43 246 aaKnown RBP17.3■□□□□ 0.36
USP53-203ENST00000507597 PCDHGB5Q9Y5G0 923 aa17.3■□□□□ 0.36
USP53-203ENST00000507597 N6AMT1Q9Y5N5 214 aa17.3■□□□□ 0.36
USP53-203ENST00000507597 R4GMQ9 66 aa17.3■□□□□ 0.36
USP53-203ENST00000507597 PMF1-BGLAPU3KQ54 211 aa17.3■□□□□ 0.36
USP53-203ENST00000507597 HEATR1Q9H583 2144 aaKnown RBP17.3■□□□□ 0.36
USP53-203ENST00000507597 RGS10O43665 173 aa17.29■□□□□ 0.36
USP53-203ENST00000507597 CDK1P06493 297 aa17.29■□□□□ 0.36
USP53-203ENST00000507597 OR4A8P0C604 315 aa17.29■□□□□ 0.36
USP53-203ENST00000507597 CRHBPP24387 322 aa17.29■□□□□ 0.36
USP53-203ENST00000507597 LIPAP38571 399 aa17.29■□□□□ 0.36
USP53-203ENST00000507597 KLF3P57682 345 aaPredicted RBP17.29■□□□□ 0.36
USP53-203ENST00000507597 LIPNQ5VXI9 398 aa17.29■□□□□ 0.36
USP53-203ENST00000507597 RNLSQ5VYX0 342 aa17.29■□□□□ 0.36
USP53-203ENST00000507597 MBNL2Q5VZF2 373 aaKnown RBP17.29■□□□□ 0.36
USP53-203ENST00000507597 FAM57BQ71RH2 274 aa17.29■□□□□ 0.36
USP53-203ENST00000507597 MRPL21Q7Z2W9 205 aaKnown RBP17.29■□□□□ 0.36
USP53-203ENST00000507597 ZNF101Q8IZC7 436 aa17.29■□□□□ 0.36
USP53-203ENST00000507597 SLC25A40Q8TBP6 338 aa17.29■□□□□ 0.36
USP53-203ENST00000507597 TMEM171Q8WVE6 324 aa17.29■□□□□ 0.36
USP53-203ENST00000507597 MRPL24Q96A35 216 aaKnown RBP17.29■□□□□ 0.36
USP53-203ENST00000507597 C4orf36Q96KX1 117 aa17.29■□□□□ 0.36
USP53-203ENST00000507597 PLEKHF2Q9H8W4 249 aa17.29■□□□□ 0.36
USP53-203ENST00000507597 BRD7Q9NPI1 651 aa17.29■□□□□ 0.36
USP53-203ENST00000507597 FKBP14Q9NWM8 211 aa17.29■□□□□ 0.36
USP53-203ENST00000507597 CGGBP1Q9UFW8 167 aaPredicted RBP17.29■□□□□ 0.36
USP53-203ENST00000507597 LRCH1Q9Y2L9 728 aa17.29■□□□□ 0.36
USP53-203ENST00000507597 STARD10Q9Y365 291 aa17.29■□□□□ 0.36
USP53-203ENST00000507597 PKDREJQ9NTG1 2253 aa17.29■□□□□ 0.36
USP53-203ENST00000507597 RPP14O95059 124 aaKnown RBP17.28■□□□□ 0.36
USP53-203ENST00000507597 NGFP01138 241 aa17.28■□□□□ 0.36
USP53-203ENST00000507597 HTR1AP08908 422 aa17.28■□□□□ 0.36
USP53-203ENST00000507597 RAC2P15153 192 aa17.28■□□□□ 0.36
USP53-203ENST00000507597 ZNF250P15622 560 aa17.28■□□□□ 0.36
USP53-203ENST00000507597 GABARAPL2P60520 117 aa17.28■□□□□ 0.36
USP53-203ENST00000507597 SNRPD2P62316 118 aaKnown RBP17.28■□□□□ 0.36
USP53-203ENST00000507597 SLC35A2P78381 396 aa17.28■□□□□ 0.36
USP53-203ENST00000507597 ZNF684Q5T5D7 378 aa17.28■□□□□ 0.36
USP53-203ENST00000507597 PGAP1Q75T13 922 aa17.28■□□□□ 0.36
USP53-203ENST00000507597 SSX6Q7RTT6 188 aa17.28■□□□□ 0.36
USP53-203ENST00000507597 OR52N1Q8NH53 320 aa17.28■□□□□ 0.36
USP53-203ENST00000507597 LILRB1Q8NHL6 650 aaPredicted RBP17.28■□□□□ 0.36
USP53-203ENST00000507597 OR2J1Q9GZK6 312 aa17.28■□□□□ 0.36
USP53-203ENST00000507597 CCDC90BQ9GZT6 254 aa17.28■□□□□ 0.36
USP53-203ENST00000507597 DUSP21Q9H596 190 aa17.28■□□□□ 0.36
USP53-203ENST00000507597 CYSLTR2Q9NS75 346 aa17.28■□□□□ 0.36
USP53-203ENST00000507597 CBLN4Q9NTU7 201 aa17.28■□□□□ 0.36
USP53-203ENST00000507597 DUSP13Q9UII6 198 aa17.28■□□□□ 0.36
USP53-203ENST00000507597 GTF2A1LQ9UNN4 478 aa17.28■□□□□ 0.36
USP53-203ENST00000507597 TMEM129A0AVI4 362 aa17.27■□□□□ 0.36
USP53-203ENST00000507597 EFNB3Q15768 340 aa17.27■□□□□ 0.36
USP53-203ENST00000507597 TP53I3Q53FA7 332 aa17.27■□□□□ 0.36
USP53-203ENST00000507597 ZMAT1Q5H9K5 638 aa17.27■□□□□ 0.36
USP53-203ENST00000507597 BCL2L15Q5TBC7 163 aa17.27■□□□□ 0.36
USP53-203ENST00000507597 HIST2H2BCQ6DN03 193 aa17.27■□□□□ 0.36
USP53-203ENST00000507597 FBXW12Q6X9E4 464 aa17.27■□□□□ 0.36
USP53-203ENST00000507597 RFPL4BQ6ZWI9 263 aa17.27■□□□□ 0.36
USP53-203ENST00000507597 PRSS48Q7RTY5 328 aa17.27■□□□□ 0.36
USP53-203ENST00000507597 CCDC54Q8NEL0 328 aa17.27■□□□□ 0.36
USP53-203ENST00000507597 KLF14Q8TD94 323 aaPredicted RBP17.27■□□□□ 0.36
USP53-203ENST00000507597 NEUROG1Q92886 237 aa17.27■□□□□ 0.36
USP53-203ENST00000507597 PIGTQ969N2 578 aa17.27■□□□□ 0.36
USP53-203ENST00000507597 MARS2Q96GW9 593 aaKnown RBP17.27■□□□□ 0.36
USP53-203ENST00000507597 MND1Q9BWT6 205 aa17.27■□□□□ 0.36
USP53-203ENST00000507597 PTTG3PQ9NZH4 202 aa17.27■□□□□ 0.36
USP53-203ENST00000507597 NUFIP1Q9UHK0 495 aaKnown RBP17.27■□□□□ 0.36
USP53-203ENST00000507597 OR52A1Q9UKL2 312 aa17.27■□□□□ 0.36
USP53-203ENST00000507597 A0A0U1RQV5 110 aa17.26■□□□□ 0.35
USP53-203ENST00000507597 A0A1W2PPW3 197 aa17.26■□□□□ 0.35
USP53-203ENST00000507597 PLSCR5A0PG75 271 aa17.26■□□□□ 0.35
USP53-203ENST00000507597 GPRIN2O60269 458 aa17.26■□□□□ 0.35
USP53-203ENST00000507597 MTRF1O75570 445 aaKnown RBP17.26■□□□□ 0.35
USP53-203ENST00000507597 ERCC1P07992 297 aaPredicted RBP17.26■□□□□ 0.35
USP53-203ENST00000507597 LIMS3P0CW19 117 aa17.26■□□□□ 0.35
USP53-203ENST00000507597 LIMS4P0CW20 117 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms