RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 RPEL1Q2QD12 228 aa1.97□□□□□ -2.09
LSM6-205ENST00000507449 FBXW9Q5XUX1 488 aa1.97□□□□□ -2.09
LSM6-205ENST00000507449 CALHM1Q8IU99 346 aa1.97□□□□□ -2.09
LSM6-205ENST00000507449 APRG1Q8IVJ8 170 aa1.97□□□□□ -2.09
LSM6-205ENST00000507449 WDFY1Q8IWB7 410 aa1.97□□□□□ -2.09
LSM6-205ENST00000507449 UBALD2Q8IYN6 164 aa1.97□□□□□ -2.09
LSM6-205ENST00000507449 LGI3Q8N145 548 aa1.97□□□□□ -2.09
LSM6-205ENST00000507449 CBR4Q8N4T8 237 aa1.97□□□□□ -2.09
LSM6-205ENST00000507449 BBOF1Q8ND07 529 aa1.97□□□□□ -2.09
LSM6-205ENST00000507449 GPR26Q8NDV2 337 aa1.97□□□□□ -2.09
LSM6-205ENST00000507449 OR11H7Q8NGC8 314 aa1.97□□□□□ -2.09
LSM6-205ENST00000507449 OR51F2Q8NH61 342 aa1.97□□□□□ -2.09
LSM6-205ENST00000507449 SYNPRQ8TBG9 265 aa1.97□□□□□ -2.09
LSM6-205ENST00000507449 GLYATL2Q8WU03 294 aa1.97□□□□□ -2.09
LSM6-205ENST00000507449 PEX13Q92968 403 aa1.97□□□□□ -2.09
LSM6-205ENST00000507449 ZNF707Q96C28 371 aaPredicted RBP1.97□□□□□ -2.09
LSM6-205ENST00000507449 DCPSQ96C86 337 aaKnown RBP1.97□□□□□ -2.09
LSM6-205ENST00000507449 FLYWCH2Q96CP2 140 aaKnown RBP1.97□□□□□ -2.09
LSM6-205ENST00000507449 CAMK2N2Q96S95 79 aa1.97□□□□□ -2.09
LSM6-205ENST00000507449 ZNF382Q96SR6 550 aa1.97□□□□□ -2.09
LSM6-205ENST00000507449 SLC38A10Q9HBR0 1119 aa1.97□□□□□ -2.09
LSM6-205ENST00000507449 CYTL1Q9NRR1 136 aa1.97□□□□□ -2.09
LSM6-205ENST00000507449 CAB39Q9Y376 341 aaPredicted RBP1.97□□□□□ -2.09
LSM6-205ENST00000507449 RFNGQ9Y644 331 aa1.97□□□□□ -2.09
LSM6-205ENST00000507449 SMIM26A0A096LP01 95 aa1.96□□□□□ -2.1
LSM6-205ENST00000507449 GOLGA6L7A0A1B0GV03 622 aa1.96□□□□□ -2.1
LSM6-205ENST00000507449 ZNF99A8MXY4 864 aaPredicted RBP1.96□□□□□ -2.1
LSM6-205ENST00000507449 H0YIV9 168 aa1.96□□□□□ -2.1
LSM6-205ENST00000507449 H0YJW9 148 aa1.96□□□□□ -2.1
LSM6-205ENST00000507449 H7C0C1 242 aa1.96□□□□□ -2.1
LSM6-205ENST00000507449 SCELO95171 688 aa1.96□□□□□ -2.1
LSM6-205ENST00000507449 HPRT1P00492 218 aa1.96□□□□□ -2.1
LSM6-205ENST00000507449 IL32P24001 234 aa1.96□□□□□ -2.1
LSM6-205ENST00000507449 LOXP28300 417 aaPredicted RBP1.96□□□□□ -2.1
LSM6-205ENST00000507449 CD70P32970 193 aa1.96□□□□□ -2.1
LSM6-205ENST00000507449 NDUFA8P51970 172 aa1.96□□□□□ -2.1
LSM6-205ENST00000507449 RAD51Q06609 339 aa1.96□□□□□ -2.1
LSM6-205ENST00000507449 IFT88Q13099 833 aa1.96□□□□□ -2.1
LSM6-205ENST00000507449 NCF4Q15080 339 aa1.96□□□□□ -2.1
LSM6-205ENST00000507449 HORMAD1Q86X24 394 aa1.96□□□□□ -2.1
LSM6-205ENST00000507449 NKAIN4Q8IVV8 208 aa1.96□□□□□ -2.1
LSM6-205ENST00000507449 MICU2Q8IYU8 434 aa1.96□□□□□ -2.1
LSM6-205ENST00000507449 ZNF709Q8N972 641 aa1.96□□□□□ -2.1
LSM6-205ENST00000507449 SNX31Q8N9S9 440 aa1.96□□□□□ -2.1
LSM6-205ENST00000507449 OR10W1Q8NGF6 305 aa1.96□□□□□ -2.1
LSM6-205ENST00000507449 OR6Q1Q8NGQ2 317 aa1.96□□□□□ -2.1
LSM6-205ENST00000507449 OPALINQ96PE5 141 aa1.96□□□□□ -2.1
LSM6-205ENST00000507449 SLIRPQ9GZT3 109 aaKnown RBP1.96□□□□□ -2.1
LSM6-205ENST00000507449 FGF23Q9GZV9 251 aaPredicted RBP1.96□□□□□ -2.1
LSM6-205ENST00000507449 PIGUQ9H490 435 aa1.96□□□□□ -2.1
LSM6-205ENST00000507449 C8orf33Q9H7E9 229 aaPredicted RBP1.96□□□□□ -2.1
LSM6-205ENST00000507449 ZNF442Q9H7R0 627 aa1.96□□□□□ -2.1
LSM6-205ENST00000507449 MRM3Q9HC36 420 aaKnown RBP1.96□□□□□ -2.1
LSM6-205ENST00000507449 CRLF2Q9HC73 371 aa1.96□□□□□ -2.1
LSM6-205ENST00000507449 PRSS16Q9NQE7 514 aa1.96□□□□□ -2.1
LSM6-205ENST00000507449 DDX19AQ9NUU7 478 aaKnown RBP1.96□□□□□ -2.1
LSM6-205ENST00000507449 SLC39A1Q9NY26 324 aa1.96□□□□□ -2.1
LSM6-205ENST00000507449 PSME2Q9UL46 239 aa1.96□□□□□ -2.1
LSM6-205ENST00000507449 ZNF835Q9Y2P0 537 aa1.96□□□□□ -2.1
LSM6-205ENST00000507449 YARS2Q9Y2Z4 477 aaKnown RBP1.96□□□□□ -2.1
LSM6-205ENST00000507449 UBIAD1Q9Y5Z9 338 aa1.96□□□□□ -2.1
LSM6-205ENST00000507449 FHOD3Q2V2M9 1422 aa1.96□□□□□ -2.1
LSM6-205ENST00000507449 PTPRTO14522 1441 aa1.95□□□□□ -2.1
LSM6-205ENST00000507449 A0A1B0GTQ1 180 aa1.95□□□□□ -2.1
LSM6-205ENST00000507449 SPRR5A0A1B0GTR4 108 aa1.95□□□□□ -2.1
LSM6-205ENST00000507449 PDZK1P1A8MUH7 402 aa1.95□□□□□ -2.1
LSM6-205ENST00000507449 KRBOX1C9JBD0 128 aa1.95□□□□□ -2.1
LSM6-205ENST00000507449 CASC3O15234 703 aaKnown RBP1.95□□□□□ -2.1
LSM6-205ENST00000507449 SEMA3DO95025 777 aa1.95□□□□□ -2.1
LSM6-205ENST00000507449 TACSTD2P09758 323 aa1.95□□□□□ -2.1
LSM6-205ENST00000507449 OR56A5P0C7T3 313 aa1.95□□□□□ -2.1
LSM6-205ENST00000507449 ZNF806P0C7X5 589 aa1.95□□□□□ -2.1
LSM6-205ENST00000507449 STAG3L3P0CL85 134 aa1.95□□□□□ -2.1
LSM6-205ENST00000507449 OPRK1P41145 380 aa1.95□□□□□ -2.1
LSM6-205ENST00000507449 RBM34P42696 430 aaKnown RBP1.95□□□□□ -2.1
LSM6-205ENST00000507449 SLC11A1P49279 550 aa1.95□□□□□ -2.1
LSM6-205ENST00000507449 RAB7AP51149 207 aa1.95□□□□□ -2.1
LSM6-205ENST00000507449 CLDN18P56856 261 aa1.95□□□□□ -2.1
LSM6-205ENST00000507449 RPL23P62829 140 aaKnown RBP1.95□□□□□ -2.1
LSM6-205ENST00000507449 CACNG7P62955 275 aa1.95□□□□□ -2.1
LSM6-205ENST00000507449 CDK5Q00535 292 aa1.95□□□□□ -2.1
LSM6-205ENST00000507449 SPAG1Q07617 926 aa1.95□□□□□ -2.1
LSM6-205ENST00000507449 ART3Q13508 389 aa1.95□□□□□ -2.1
LSM6-205ENST00000507449 RBMY1FQ15415 496 aaKnown RBP1.95□□□□□ -2.1
LSM6-205ENST00000507449 HIKESHIQ53FT3 197 aa1.95□□□□□ -2.1
LSM6-205ENST00000507449 MPV17L2Q567V2 206 aa1.95□□□□□ -2.1
LSM6-205ENST00000507449 BEX5Q5H9J7 111 aa1.95□□□□□ -2.1
LSM6-205ENST00000507449 TCEAL5Q5H9L2 206 aa1.95□□□□□ -2.1
LSM6-205ENST00000507449 PIP5KL1Q5T9C9 394 aa1.95□□□□□ -2.1
LSM6-205ENST00000507449 TMCO2Q7Z6W1 182 aaPredicted RBP1.95□□□□□ -2.1
LSM6-205ENST00000507449 OR52P1PQ8NH57 321 aa1.95□□□□□ -2.1
LSM6-205ENST00000507449 ZNF461Q8TAF7 563 aa1.95□□□□□ -2.1
LSM6-205ENST00000507449 GPX8Q8TED1 209 aa1.95□□□□□ -2.1
LSM6-205ENST00000507449 TCEAL3Q969E4 200 aa1.95□□□□□ -2.1
LSM6-205ENST00000507449 SGTBQ96EQ0 304 aa1.95□□□□□ -2.1
LSM6-205ENST00000507449 HSD17B10Q99714 261 aaKnown RBP1.95□□□□□ -2.1
LSM6-205ENST00000507449 SPIN2AQ99865 258 aa1.95□□□□□ -2.1
LSM6-205ENST00000507449 RNF5Q99942 180 aa1.95□□□□□ -2.1
LSM6-205ENST00000507449 SPIN2BQ9BPZ2 258 aa1.95□□□□□ -2.1
LSM6-205ENST00000507449 GGTLC1Q9BX51 225 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms