RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 OR6C68A6NDL8 312 aa12.12□□□□□ -0.47
HMGCS1-203ENST00000507004 M0R135 149 aa12.12□□□□□ -0.47
HMGCS1-203ENST00000507004 CCNB2O95067 398 aa12.12□□□□□ -0.47
HMGCS1-203ENST00000507004 WNT2P09544 360 aa12.12□□□□□ -0.47
HMGCS1-203ENST00000507004 RPS2P15880 293 aaKnown RBP12.12□□□□□ -0.47
HMGCS1-203ENST00000507004 ZFP36P26651 326 aaKnown RBP12.12□□□□□ -0.47
HMGCS1-203ENST00000507004 CD200P41217 278 aa12.12□□□□□ -0.47
HMGCS1-203ENST00000507004 MAGEA2P43356 314 aa12.12□□□□□ -0.47
HMGCS1-203ENST00000507004 GNGT1P63211 74 aa12.12□□□□□ -0.47
HMGCS1-203ENST00000507004 HLXQ14774 488 aaPredicted RBP12.12□□□□□ -0.47
HMGCS1-203ENST00000507004 SPRNQ5BIV9 151 aa12.12□□□□□ -0.47
HMGCS1-203ENST00000507004 DRAM2Q6UX65 266 aa12.12□□□□□ -0.47
HMGCS1-203ENST00000507004 MRPL21Q7Z2W9 205 aaKnown RBP12.12□□□□□ -0.47
HMGCS1-203ENST00000507004 KLBQ86Z14 1044 aa12.12□□□□□ -0.47
HMGCS1-203ENST00000507004 C3orf56Q8N813 242 aa12.12□□□□□ -0.47
HMGCS1-203ENST00000507004 SDR9C7Q8NEX9 313 aa12.12□□□□□ -0.47
HMGCS1-203ENST00000507004 PROKR2Q8NFJ6 384 aa12.12□□□□□ -0.47
HMGCS1-203ENST00000507004 OR8B3Q8NGG8 313 aa12.12□□□□□ -0.47
HMGCS1-203ENST00000507004 Q8TCH9 128 aa12.12□□□□□ -0.47
HMGCS1-203ENST00000507004 SPRYD4Q8WW59 207 aaPredicted RBP12.12□□□□□ -0.47
HMGCS1-203ENST00000507004 NEIL1Q96FI4 390 aaPredicted RBP12.12□□□□□ -0.47
HMGCS1-203ENST00000507004 ZNF799Q96GE5 643 aa12.12□□□□□ -0.47
HMGCS1-203ENST00000507004 OR8B2Q96RD0 313 aa12.12□□□□□ -0.47
HMGCS1-203ENST00000507004 SLC6A7Q99884 636 aa12.12□□□□□ -0.47
HMGCS1-203ENST00000507004 SSBP3Q9BWW4 388 aaPredicted RBP12.12□□□□□ -0.47
HMGCS1-203ENST00000507004 SP140LQ9H930 580 aa12.12□□□□□ -0.47
HMGCS1-203ENST00000507004 TMEM165Q9HC07 324 aa12.12□□□□□ -0.47
HMGCS1-203ENST00000507004 DCAF16Q9NXF7 216 aa12.12□□□□□ -0.47
HMGCS1-203ENST00000507004 PPIAL4AQ9Y536 164 aa12.12□□□□□ -0.47
HMGCS1-203ENST00000507004 LYVE1Q9Y5Y7 322 aa12.12□□□□□ -0.47
HMGCS1-203ENST00000507004 BHLHE40O14503 412 aa12.11□□□□□ -0.47
HMGCS1-203ENST00000507004 GMDSO60547 372 aa12.11□□□□□ -0.47
HMGCS1-203ENST00000507004 IFNGP01579 166 aa12.11□□□□□ -0.47
HMGCS1-203ENST00000507004 APOC1P02654 83 aa12.11□□□□□ -0.47
HMGCS1-203ENST00000507004 CFPP27918 469 aa12.11□□□□□ -0.47
HMGCS1-203ENST00000507004 FMO3P31513 532 aa12.11□□□□□ -0.47
HMGCS1-203ENST00000507004 DDOSTP39656 456 aa12.11□□□□□ -0.47
HMGCS1-203ENST00000507004 MTNR1AP48039 350 aa12.11□□□□□ -0.47
HMGCS1-203ENST00000507004 NPY4RP50391 375 aa12.11□□□□□ -0.47
HMGCS1-203ENST00000507004 ERFP50548 548 aa12.11□□□□□ -0.47
HMGCS1-203ENST00000507004 BPIFB3P59826 476 aa12.11□□□□□ -0.47
HMGCS1-203ENST00000507004 GNB2P62879 340 aa12.11□□□□□ -0.47
HMGCS1-203ENST00000507004 GK2Q14410 553 aaPredicted RBP12.11□□□□□ -0.47
HMGCS1-203ENST00000507004 RSPO1Q2MKA7 263 aaPredicted RBP12.11□□□□□ -0.47
HMGCS1-203ENST00000507004 CFAP77Q6ZQR2 320 aa12.11□□□□□ -0.47
HMGCS1-203ENST00000507004 DCDC5Q6ZRR9 648 aa12.11□□□□□ -0.47
HMGCS1-203ENST00000507004 DOK3Q7L591 496 aa12.11□□□□□ -0.47
HMGCS1-203ENST00000507004 LINC00346Q8IVM7 164 aa12.11□□□□□ -0.47
HMGCS1-203ENST00000507004 LNX2Q8N448 690 aa12.11□□□□□ -0.47
HMGCS1-203ENST00000507004 OR10AD1Q8NGE0 317 aa12.11□□□□□ -0.47
HMGCS1-203ENST00000507004 DVL3Q92997 716 aaPredicted RBP12.11□□□□□ -0.47
HMGCS1-203ENST00000507004 PNRC2Q9NPJ4 139 aaKnown RBP12.11□□□□□ -0.47
HMGCS1-203ENST00000507004 ARL8BQ9NVJ2 186 aa12.11□□□□□ -0.47
HMGCS1-203ENST00000507004 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.1□□□□□ -0.47
HMGCS1-203ENST00000507004 TRAPPC2LH3BP13 241 aa12.1□□□□□ -0.47
HMGCS1-203ENST00000507004 PHYHO14832 338 aa12.1□□□□□ -0.47
HMGCS1-203ENST00000507004 MLNRO43193 412 aa12.1□□□□□ -0.47
HMGCS1-203ENST00000507004 NDUFA2O43678 99 aa12.1□□□□□ -0.47
HMGCS1-203ENST00000507004 GPANK1O95872 356 aa12.1□□□□□ -0.47
HMGCS1-203ENST00000507004 OTX1P32242 354 aaPredicted RBP12.1□□□□□ -0.47
HMGCS1-203ENST00000507004 SLC15A1P46059 708 aa12.1□□□□□ -0.47
HMGCS1-203ENST00000507004 SLC25A1P53007 311 aa12.1□□□□□ -0.47
HMGCS1-203ENST00000507004 PAX8Q06710 450 aa12.1□□□□□ -0.47
HMGCS1-203ENST00000507004 FOXL1Q12952 345 aa12.1□□□□□ -0.47
HMGCS1-203ENST00000507004 SNCBQ16143 134 aa12.1□□□□□ -0.47
HMGCS1-203ENST00000507004 TUSC1Q2TAM9 212 aa12.1□□□□□ -0.47
HMGCS1-203ENST00000507004 C11orf91Q3C1V1 193 aa12.1□□□□□ -0.47
HMGCS1-203ENST00000507004 ZNF404Q494X3 552 aa12.1□□□□□ -0.47
HMGCS1-203ENST00000507004 FAM98BQ52LJ0 330 aaKnown RBP12.1□□□□□ -0.47
HMGCS1-203ENST00000507004 TEX30Q5JUR7 227 aa12.1□□□□□ -0.47
HMGCS1-203ENST00000507004 CLEC12AQ5QGZ9 265 aa12.1□□□□□ -0.47
HMGCS1-203ENST00000507004 SLC35F1Q5T1Q4 408 aa12.1□□□□□ -0.47
HMGCS1-203ENST00000507004 OTPQ5XKR4 325 aa12.1□□□□□ -0.47
HMGCS1-203ENST00000507004 LCN8Q6JVE9 175 aa12.1□□□□□ -0.47
HMGCS1-203ENST00000507004 MOGAT3Q86VF5 341 aa12.1□□□□□ -0.47
HMGCS1-203ENST00000507004 BHLHE23Q8NDY6 225 aa12.1□□□□□ -0.47
HMGCS1-203ENST00000507004 OR2T33Q8NG76 320 aa12.1□□□□□ -0.47
HMGCS1-203ENST00000507004 SGMS2Q8NHU3 365 aa12.1□□□□□ -0.47
HMGCS1-203ENST00000507004 RAB40AQ8WXH6 277 aa12.1□□□□□ -0.47
HMGCS1-203ENST00000507004 DDOQ99489 341 aa12.1□□□□□ -0.47
HMGCS1-203ENST00000507004 TOR3AQ9H497 397 aa12.1□□□□□ -0.47
HMGCS1-203ENST00000507004 REEP1Q9H902 201 aa12.1□□□□□ -0.47
HMGCS1-203ENST00000507004 FN3KRPQ9HA64 309 aa12.1□□□□□ -0.47
HMGCS1-203ENST00000507004 MMP26Q9NRE1 261 aa12.1□□□□□ -0.47
HMGCS1-203ENST00000507004 TBC1D23Q9NUY8 699 aa12.1□□□□□ -0.47
HMGCS1-203ENST00000507004 MRPL22Q9NWU5 206 aaKnown RBP12.1□□□□□ -0.47
HMGCS1-203ENST00000507004 MRPL15Q9P015 296 aaKnown RBP12.1□□□□□ -0.47
HMGCS1-203ENST00000507004 CD300LBA8K4G0 201 aa12.09□□□□□ -0.47
HMGCS1-203ENST00000507004 F5H5P2 479 aa12.09□□□□□ -0.47
HMGCS1-203ENST00000507004 XRCC2O43543 280 aa12.09□□□□□ -0.47
HMGCS1-203ENST00000507004 PTBP3O95758 552 aaKnown RBP12.09□□□□□ -0.47
HMGCS1-203ENST00000507004 PRTN3P24158 256 aa12.09□□□□□ -0.47
HMGCS1-203ENST00000507004 MSX2P35548 267 aaPredicted RBP12.09□□□□□ -0.47
HMGCS1-203ENST00000507004 ENTPD1P49961 510 aa12.09□□□□□ -0.47
HMGCS1-203ENST00000507004 UBA52P62987 128 aaKnown RBP12.09□□□□□ -0.47
HMGCS1-203ENST00000507004 TRIM25Q14258 630 aaKnown RBP12.09□□□□□ -0.47
HMGCS1-203ENST00000507004 TAF13Q15543 124 aa12.09□□□□□ -0.47
HMGCS1-203ENST00000507004 OR8G1Q15617 311 aa12.09□□□□□ -0.47
HMGCS1-203ENST00000507004 PCK2Q16822 640 aa12.09□□□□□ -0.47
HMGCS1-203ENST00000507004 CD276Q5ZPR3 534 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms