RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 SLC26A1Q9H2B4 701 aa15.27■□□□□ 0.04
SQSTM1-211ENST00000506690 CNTD2Q9H8S5 307 aa15.27■□□□□ 0.04
SQSTM1-211ENST00000506690 LRP12Q9Y561 859 aa15.27■□□□□ 0.04
SQSTM1-211ENST00000506690 FLVCR1Q9Y5Y0 555 aa15.27■□□□□ 0.04
SQSTM1-211ENST00000506690 OIP5O43482 229 aa15.27■□□□□ 0.03
SQSTM1-211ENST00000506690 GNB3P16520 340 aa15.27■□□□□ 0.03
SQSTM1-211ENST00000506690 RAB38P57729 211 aa15.27■□□□□ 0.03
SQSTM1-211ENST00000506690 NUP54Q7Z3B4 507 aa15.27■□□□□ 0.03
SQSTM1-211ENST00000506690 GKN2Q86XP6 184 aa15.27■□□□□ 0.03
SQSTM1-211ENST00000506690 FAM3CQ92520 227 aa15.27■□□□□ 0.03
SQSTM1-211ENST00000506690 ZNF524Q96C55 264 aa15.27■□□□□ 0.03
SQSTM1-211ENST00000506690 SCARF2Q96GP6 870 aaPredicted RBP15.27■□□□□ 0.03
SQSTM1-211ENST00000506690 MESP1Q9BRJ9 268 aa15.27■□□□□ 0.03
SQSTM1-211ENST00000506690 FGF22Q9HCT0 170 aa15.27■□□□□ 0.03
SQSTM1-211ENST00000506690 USP34Q70CQ2 3546 aa15.27■□□□□ 0.03
SQSTM1-211ENST00000506690 ZNF264O43296 627 aa15.26■□□□□ 0.03
SQSTM1-211ENST00000506690 PLGP00747 810 aaPredicted RBP15.26■□□□□ 0.03
SQSTM1-211ENST00000506690 CST4P01036 141 aa15.26■□□□□ 0.03
SQSTM1-211ENST00000506690 ISG15P05161 165 aa15.26■□□□□ 0.03
SQSTM1-211ENST00000506690 PET100P0DJ07 73 aa15.26■□□□□ 0.03
SQSTM1-211ENST00000506690 ADH6P28332 368 aa15.26■□□□□ 0.03
SQSTM1-211ENST00000506690 GPX4P36969 197 aaPredicted RBP15.26■□□□□ 0.03
SQSTM1-211ENST00000506690 RAB2AP61019 212 aa15.26■□□□□ 0.03
SQSTM1-211ENST00000506690 SUPT4H1P63272 117 aaKnown RBP15.26■□□□□ 0.03
SQSTM1-211ENST00000506690 SLC9A3R2Q15599 337 aa15.26■□□□□ 0.03
SQSTM1-211ENST00000506690 FNDC7Q5VTL7 733 aa15.26■□□□□ 0.03
SQSTM1-211ENST00000506690 GRASPQ7Z6J2 395 aaPredicted RBP15.26■□□□□ 0.03
SQSTM1-211ENST00000506690 FRMD1Q8N878 549 aa15.26■□□□□ 0.03
SQSTM1-211ENST00000506690 GATSQ8NAP1 163 aa15.26■□□□□ 0.03
SQSTM1-211ENST00000506690 POC1AQ8NBT0 407 aa15.26■□□□□ 0.03
SQSTM1-211ENST00000506690 OR4K15Q8NH41 348 aa15.26■□□□□ 0.03
SQSTM1-211ENST00000506690 TAAR8Q969N4 342 aa15.26■□□□□ 0.03
SQSTM1-211ENST00000506690 C2orf50Q96LR7 162 aa15.26■□□□□ 0.03
SQSTM1-211ENST00000506690 ABHD6Q9BV23 337 aa15.26■□□□□ 0.03
SQSTM1-211ENST00000506690 TMEM106CQ9BVX2 250 aa15.26■□□□□ 0.03
SQSTM1-211ENST00000506690 SCRT1Q9BWW7 348 aa15.26■□□□□ 0.03
SQSTM1-211ENST00000506690 A0A0A6YYC8 382 aaPredicted RBP15.26■□□□□ 0.03
SQSTM1-211ENST00000506690 LOC107986453A0A1B0GWG9 222 aa15.26■□□□□ 0.03
SQSTM1-211ENST00000506690 I3L1I5 382 aaPredicted RBP15.26■□□□□ 0.03
SQSTM1-211ENST00000506690 HKR1P10072 659 aa15.26■□□□□ 0.03
SQSTM1-211ENST00000506690 IGFALSP35858 605 aa15.26■□□□□ 0.03
SQSTM1-211ENST00000506690 CD226Q15762 336 aa15.26■□□□□ 0.03
SQSTM1-211ENST00000506690 CST6Q15828 149 aa15.26■□□□□ 0.03
SQSTM1-211ENST00000506690 ANKRD55Q3KP44 614 aa15.26■□□□□ 0.03
SQSTM1-211ENST00000506690 ADAM5Q6NVV9 412 aa15.26■□□□□ 0.03
SQSTM1-211ENST00000506690 C1QL4Q86Z23 238 aa15.26■□□□□ 0.03
SQSTM1-211ENST00000506690 TOLLIPQ9H0E2 274 aa15.26■□□□□ 0.03
SQSTM1-211ENST00000506690 PRR13Q9NZ81 148 aa15.26■□□□□ 0.03
SQSTM1-211ENST00000506690 PTPRSQ13332 1948 aa15.25■□□□□ 0.03
SQSTM1-211ENST00000506690 LMX1BO60663 402 aa15.25■□□□□ 0.03
SQSTM1-211ENST00000506690 DAOP14920 347 aa15.25■□□□□ 0.03
SQSTM1-211ENST00000506690 MAS1LP35410 378 aa15.25■□□□□ 0.03
SQSTM1-211ENST00000506690 VIPR2P41587 438 aa15.25■□□□□ 0.03
SQSTM1-211ENST00000506690 CENPAP49450 140 aa15.25■□□□□ 0.03
SQSTM1-211ENST00000506690 RAB5CP51148 216 aa15.25■□□□□ 0.03
SQSTM1-211ENST00000506690 OR2B8PP59922 312 aa15.25■□□□□ 0.03
SQSTM1-211ENST00000506690 SKP2Q13309 424 aa15.25■□□□□ 0.03
SQSTM1-211ENST00000506690 TCEA2Q15560 299 aa15.25■□□□□ 0.03
SQSTM1-211ENST00000506690 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.25■□□□□ 0.03
SQSTM1-211ENST00000506690 C9orf152Q5JTZ5 239 aa15.25■□□□□ 0.03
SQSTM1-211ENST00000506690 CBLN3Q6UW01 205 aa15.25■□□□□ 0.03
SQSTM1-211ENST00000506690 TMEM151BQ8IW70 566 aa15.25■□□□□ 0.03
SQSTM1-211ENST00000506690 FAM24BQ8N5W8 94 aa15.25■□□□□ 0.03
SQSTM1-211ENST00000506690 BADQ92934 168 aa15.25■□□□□ 0.03
SQSTM1-211ENST00000506690 PFDN5Q99471 154 aa15.25■□□□□ 0.03
SQSTM1-211ENST00000506690 MAP3K3Q99759 626 aa15.25■□□□□ 0.03
SQSTM1-211ENST00000506690 WDR77Q9BQA1 342 aaPredicted RBP15.25■□□□□ 0.03
SQSTM1-211ENST00000506690 NUDT16L1Q9BRJ7 211 aaKnown RBP15.25■□□□□ 0.03
SQSTM1-211ENST00000506690 APOOQ9BUR5 198 aa15.25■□□□□ 0.03
SQSTM1-211ENST00000506690 RGCCQ9H4X1 137 aa15.25■□□□□ 0.03
SQSTM1-211ENST00000506690 LMAN1LQ9HAT1 526 aa15.25■□□□□ 0.03
SQSTM1-211ENST00000506690 TBC1D3DA0A087WVF3 549 aa15.25■□□□□ 0.03
SQSTM1-211ENST00000506690 IGLV1-36A0A0B4J1U3 117 aa15.25■□□□□ 0.03
SQSTM1-211ENST00000506690 TBC1D3LB9A6J9 549 aa15.25■□□□□ 0.03
SQSTM1-211ENST00000506690 TGFBR3LH3BV60 316 aa15.25■□□□□ 0.03
SQSTM1-211ENST00000506690 XKRYO14609 159 aa15.25■□□□□ 0.03
SQSTM1-211ENST00000506690 HOXC4P09017 264 aaPredicted RBP15.25■□□□□ 0.03
SQSTM1-211ENST00000506690 TBC1D3HP0C7X1 549 aa15.25■□□□□ 0.03
SQSTM1-211ENST00000506690 CCR4P51679 360 aa15.25■□□□□ 0.03
SQSTM1-211ENST00000506690 LBX1P52954 281 aa15.25■□□□□ 0.03
SQSTM1-211ENST00000506690 BTG2P78543 158 aa15.25■□□□□ 0.03
SQSTM1-211ENST00000506690 NCMAPQ5T1S8 102 aa15.25■□□□□ 0.03
SQSTM1-211ENST00000506690 TBC1D3CQ6IPX1 549 aa15.25■□□□□ 0.03
SQSTM1-211ENST00000506690 FAM219AQ8IW50 185 aa15.25■□□□□ 0.03
SQSTM1-211ENST00000506690 TBC1D3Q8IZP1 549 aaPredicted RBP15.25■□□□□ 0.03
SQSTM1-211ENST00000506690 G6PC2Q9NQR9 355 aa15.25■□□□□ 0.03
SQSTM1-211ENST00000506690 EMC9Q9Y3B6 208 aa15.25■□□□□ 0.03
SQSTM1-211ENST00000506690 R4GMQ9 66 aa15.25■□□□□ 0.03
SQSTM1-211ENST00000506690 A0A1W2PP55 124 aa15.24■□□□□ 0.03
SQSTM1-211ENST00000506690 PRSS37A4D1T9 235 aa15.24■□□□□ 0.03
SQSTM1-211ENST00000506690 SCGNO76038 276 aa15.24■□□□□ 0.03
SQSTM1-211ENST00000506690 OR6A2O95222 327 aa15.24■□□□□ 0.03
SQSTM1-211ENST00000506690 SLC34A2O95436 690 aa15.24■□□□□ 0.03
SQSTM1-211ENST00000506690 GAPDHP04406 335 aaKnown RBP15.24■□□□□ 0.03
SQSTM1-211ENST00000506690 RD3LP0DJH9 198 aa15.24■□□□□ 0.03
SQSTM1-211ENST00000506690 VSIG8P0DPA2 414 aa15.24■□□□□ 0.03
SQSTM1-211ENST00000506690 SNCAP37840 140 aa15.24■□□□□ 0.03
SQSTM1-211ENST00000506690 UCP2P55851 309 aa15.24■□□□□ 0.03
SQSTM1-211ENST00000506690 SGCGQ13326 291 aa15.24■□□□□ 0.03
SQSTM1-211ENST00000506690 VAX1Q5SQQ9 334 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms