RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 NRF1Q16656 503 aa2.33□□□□□ -2.04
TRAPPC11-205ENST00000506426 C9orf129Q5T035 196 aaKnown RBP2.33□□□□□ -2.04
TRAPPC11-205ENST00000506426 PLCXD3Q63HM9 321 aa2.33□□□□□ -2.04
TRAPPC11-205ENST00000506426 ANKRD26P1Q6NSI1 321 aa2.33□□□□□ -2.04
TRAPPC11-205ENST00000506426 SCARA5Q6ZMJ2 495 aa2.33□□□□□ -2.04
TRAPPC11-205ENST00000506426 RALGPS2Q86X27 583 aaPredicted RBP2.33□□□□□ -2.04
TRAPPC11-205ENST00000506426 CMTM8Q8IZV2 173 aa2.33□□□□□ -2.04
TRAPPC11-205ENST00000506426 CEND1Q8N111 149 aa2.33□□□□□ -2.04
TRAPPC11-205ENST00000506426 LYG1Q8N1E2 194 aa2.33□□□□□ -2.04
TRAPPC11-205ENST00000506426 PNKDQ8N490 385 aa2.33□□□□□ -2.04
TRAPPC11-205ENST00000506426 PDCL2Q8N4E4 241 aa2.33□□□□□ -2.04
TRAPPC11-205ENST00000506426 OR5B17Q8NGF7 314 aa2.33□□□□□ -2.04
TRAPPC11-205ENST00000506426 OR1N2Q8NGR9 330 aa2.33□□□□□ -2.04
TRAPPC11-205ENST00000506426 FANK1Q8TC84 345 aa2.33□□□□□ -2.04
TRAPPC11-205ENST00000506426 SLC7A13Q8TCU3 470 aa2.33□□□□□ -2.04
TRAPPC11-205ENST00000506426 GLYATL2Q8WU03 294 aa2.33□□□□□ -2.04
TRAPPC11-205ENST00000506426 ARPC1AQ92747 370 aa2.33□□□□□ -2.04
TRAPPC11-205ENST00000506426 ISG20Q96AZ6 181 aaKnown RBP2.33□□□□□ -2.04
TRAPPC11-205ENST00000506426 MED8Q96G25 268 aa2.33□□□□□ -2.04
TRAPPC11-205ENST00000506426 LINC00597Q9H2U6 94 aa2.33□□□□□ -2.04
TRAPPC11-205ENST00000506426 C8orf33Q9H7E9 229 aaPredicted RBP2.33□□□□□ -2.04
TRAPPC11-205ENST00000506426 UGT1A10Q9HAW8 530 aa2.33□□□□□ -2.04
TRAPPC11-205ENST00000506426 PARVGQ9HBI0 331 aa2.33□□□□□ -2.04
TRAPPC11-205ENST00000506426 TMEM165Q9HC07 324 aa2.33□□□□□ -2.04
TRAPPC11-205ENST00000506426 MRPS30Q9NP92 439 aaKnown RBP2.33□□□□□ -2.04
TRAPPC11-205ENST00000506426 CHRAC1Q9NRG0 131 aa2.33□□□□□ -2.04
TRAPPC11-205ENST00000506426 TNFRSF19Q9NS68 423 aa2.33□□□□□ -2.04
TRAPPC11-205ENST00000506426 RBAKQ9NYW8 714 aaPredicted RBP2.33□□□□□ -2.04
TRAPPC11-205ENST00000506426 GNPTGQ9UJJ9 305 aa2.33□□□□□ -2.04
TRAPPC11-205ENST00000506426 GOLT1BQ9Y3E0 138 aa2.33□□□□□ -2.04
TRAPPC11-205ENST00000506426 CHTOPQ9Y3Y2 248 aaKnown RBP2.33□□□□□ -2.04
TRAPPC11-205ENST00000506426 MMP24Q9Y5R2 645 aa2.33□□□□□ -2.04
TRAPPC11-205ENST00000506426 SLC25A15Q9Y619 301 aa2.33□□□□□ -2.04
TRAPPC11-205ENST00000506426 GTF3C1Q12789 2109 aa2.33□□□□□ -2.04
TRAPPC11-205ENST00000506426 SDK1Q7Z5N4 2213 aa2.33□□□□□ -2.04
TRAPPC11-205ENST00000506426 TSC2P49815 1807 aa2.33□□□□□ -2.04
TRAPPC11-205ENST00000506426 SETXQ7Z333 2677 aaKnown RBP2.33□□□□□ -2.04
TRAPPC11-205ENST00000506426 TICRRQ7Z2Z1 1910 aa2.32□□□□□ -2.04
TRAPPC11-205ENST00000506426 MYH9P35579 1960 aaKnown RBP2.32□□□□□ -2.04
TRAPPC11-205ENST00000506426 DOCK6Q96HP0 2047 aa2.32□□□□□ -2.04
TRAPPC11-205ENST00000506426 MYO10Q9HD67 2058 aa2.32□□□□□ -2.04
TRAPPC11-205ENST00000506426 FLNBO75369 2602 aaKnown RBP2.32□□□□□ -2.04
TRAPPC11-205ENST00000506426 FREM2Q5SZK8 3169 aa2.32□□□□□ -2.04
TRAPPC11-205ENST00000506426 ARPC4-TTLL3A0A0A6YYG9 625 aa2.32□□□□□ -2.04
TRAPPC11-205ENST00000506426 TRAV19A0A0A6YYK7 116 aa2.32□□□□□ -2.04
TRAPPC11-205ENST00000506426 TRBV9A0A0B4J1U6 114 aa2.32□□□□□ -2.04
TRAPPC11-205ENST00000506426 KIR2DL5BA0A0G2JN68 375 aa2.32□□□□□ -2.04
TRAPPC11-205ENST00000506426 KIR2DL5BA0A0G2JPC4 375 aa2.32□□□□□ -2.04
TRAPPC11-205ENST00000506426 KBTBD11-OT1A0A1B0GTJ5 212 aa2.32□□□□□ -2.04
TRAPPC11-205ENST00000506426 F8VP50 259 aa2.32□□□□□ -2.04
TRAPPC11-205ENST00000506426 H3BQV1 296 aa2.32□□□□□ -2.04
TRAPPC11-205ENST00000506426 TEX46H3BTG2 121 aa2.32□□□□□ -2.04
TRAPPC11-205ENST00000506426 K7EQS6 105 aa2.32□□□□□ -2.04
TRAPPC11-205ENST00000506426 TRDMT1O14717 391 aaKnown RBP2.32□□□□□ -2.04
TRAPPC11-205ENST00000506426 CHST1O43916 411 aa2.32□□□□□ -2.04
TRAPPC11-205ENST00000506426 KLF8O95600 359 aaPredicted RBP2.32□□□□□ -2.04
TRAPPC11-205ENST00000506426 ZNF806P0C7X5 589 aa2.32□□□□□ -2.04
TRAPPC11-205ENST00000506426 ICAM2P13598 275 aa2.32□□□□□ -2.04
TRAPPC11-205ENST00000506426 DCKP27707 260 aa2.32□□□□□ -2.04
TRAPPC11-205ENST00000506426 CASP1P29466 404 aa2.32□□□□□ -2.04
TRAPPC11-205ENST00000506426 RPS5P46782 204 aaKnown RBP2.32□□□□□ -2.04
TRAPPC11-205ENST00000506426 RGRP47804 291 aa2.32□□□□□ -2.04
TRAPPC11-205ENST00000506426 TUFMP49411 452 aaKnown RBP2.32□□□□□ -2.04
TRAPPC11-205ENST00000506426 CLDN6P56747 220 aa2.32□□□□□ -2.04
TRAPPC11-205ENST00000506426 CLDN8P56748 225 aa2.32□□□□□ -2.04
TRAPPC11-205ENST00000506426 PRPS1P60891 318 aa2.32□□□□□ -2.04
TRAPPC11-205ENST00000506426 ZNF92Q03936 586 aa2.32□□□□□ -2.04
TRAPPC11-205ENST00000506426 SELENBP1Q13228 472 aa2.32□□□□□ -2.04
TRAPPC11-205ENST00000506426 KRTAP27-1Q3LI81 207 aa2.32□□□□□ -2.04
TRAPPC11-205ENST00000506426 BEX5Q5H9J7 111 aa2.32□□□□□ -2.04
TRAPPC11-205ENST00000506426 SOHLH1Q5JUK2 328 aa2.32□□□□□ -2.04
TRAPPC11-205ENST00000506426 VAX1Q5SQQ9 334 aa2.32□□□□□ -2.04
TRAPPC11-205ENST00000506426 CASC10Q5T4H9 136 aa2.32□□□□□ -2.04
TRAPPC11-205ENST00000506426 RSBN1Q5VWQ0 802 aaPredicted RBP2.32□□□□□ -2.04
TRAPPC11-205ENST00000506426 NELFCDQ8IXH7 590 aa2.32□□□□□ -2.04
TRAPPC11-205ENST00000506426 KIR2DL5AQ8N109 375 aa2.32□□□□□ -2.04
TRAPPC11-205ENST00000506426 OR52K1Q8NGK4 314 aa2.32□□□□□ -2.04
TRAPPC11-205ENST00000506426 KIR2DL5BQ8NHK3 375 aa2.32□□□□□ -2.04
TRAPPC11-205ENST00000506426 ZNF502Q8TBZ5 544 aa2.32□□□□□ -2.04
TRAPPC11-205ENST00000506426 MARCH1Q8TCQ1 289 aa2.32□□□□□ -2.04
TRAPPC11-205ENST00000506426 SPPL2BQ8TCT7 592 aa2.32□□□□□ -2.04
TRAPPC11-205ENST00000506426 ANKRD9Q96BM1 317 aaPredicted RBP2.32□□□□□ -2.04
TRAPPC11-205ENST00000506426 CCDC127Q96BQ5 260 aa2.32□□□□□ -2.04
TRAPPC11-205ENST00000506426 MSANTD3Q96H12 275 aa2.32□□□□□ -2.04
TRAPPC11-205ENST00000506426 PKNOX2Q96KN3 472 aa2.32□□□□□ -2.04
TRAPPC11-205ENST00000506426 FCRL1Q96LA6 429 aa2.32□□□□□ -2.04
TRAPPC11-205ENST00000506426 PRRC1Q96M27 445 aa2.32□□□□□ -2.04
TRAPPC11-205ENST00000506426 PKMYT1Q99640 499 aa2.32□□□□□ -2.04
TRAPPC11-205ENST00000506426 SH3GL3Q99963 347 aa2.32□□□□□ -2.04
TRAPPC11-205ENST00000506426 BCL7BQ9BQE9 202 aa2.32□□□□□ -2.04
TRAPPC11-205ENST00000506426 NRIP2Q9BQI9 281 aa2.32□□□□□ -2.04
TRAPPC11-205ENST00000506426 LLPHQ9BRT6 129 aaKnown RBP2.32□□□□□ -2.04
TRAPPC11-205ENST00000506426 ANKRD60Q9BZ19 345 aa2.32□□□□□ -2.04
TRAPPC11-205ENST00000506426 BLZF1Q9H2G9 400 aa2.32□□□□□ -2.04
TRAPPC11-205ENST00000506426 OR51J1Q9H342 316 aa2.32□□□□□ -2.04
TRAPPC11-205ENST00000506426 TMEM9BQ9NQ34 198 aa2.32□□□□□ -2.04
TRAPPC11-205ENST00000506426 HRASLS2Q9NWW9 162 aa2.32□□□□□ -2.04
TRAPPC11-205ENST00000506426 XCL2Q9UBD3 114 aa2.32□□□□□ -2.04
TRAPPC11-205ENST00000506426 CLCF1Q9UBD9 225 aa2.32□□□□□ -2.04
TRAPPC11-205ENST00000506426 PEF1Q9UBV8 284 aaKnown RBP2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms