RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 IKZF1Q13422 519 aa10.05□□□□□ -0.8
LSM6-204ENST00000504181 C10orf99Q6UWK7 81 aa10.05□□□□□ -0.8
LSM6-204ENST00000504181 COLCA1Q6ZS62 124 aa10.05□□□□□ -0.8
LSM6-204ENST00000504181 ZNF826PQ6ZT77 177 aa10.05□□□□□ -0.8
LSM6-204ENST00000504181 GCSAMQ8N6F7 178 aa10.05□□□□□ -0.8
LSM6-204ENST00000504181 PCYOX1LQ8NBM8 494 aa10.05□□□□□ -0.8
LSM6-204ENST00000504181 OR51D1Q8NGF3 324 aa10.05□□□□□ -0.8
LSM6-204ENST00000504181 OR4X2Q8NGF9 303 aa10.05□□□□□ -0.8
LSM6-204ENST00000504181 OR5L1Q8NGL2 311 aa10.05□□□□□ -0.8
LSM6-204ENST00000504181 BBS10Q8TAM1 723 aa10.05□□□□□ -0.8
LSM6-204ENST00000504181 MAL2Q969L2 176 aa10.05□□□□□ -0.8
LSM6-204ENST00000504181 DMRTB1Q96MA1 342 aa10.05□□□□□ -0.8
LSM6-204ENST00000504181 OR52E6Q96RD3 313 aa10.05□□□□□ -0.8
LSM6-204ENST00000504181 FMO2Q99518 471 aa10.05□□□□□ -0.8
LSM6-204ENST00000504181 METTL8Q9H825 291 aaKnown RBP10.05□□□□□ -0.8
LSM6-204ENST00000504181 ZMAT4Q9H898 229 aa10.05□□□□□ -0.8
LSM6-204ENST00000504181 AKTIPQ9H8T0 292 aa10.05□□□□□ -0.8
LSM6-204ENST00000504181 EMC7Q9NPA0 242 aa10.05□□□□□ -0.8
LSM6-204ENST00000504181 C1orf123Q9NWV4 160 aa10.05□□□□□ -0.8
LSM6-204ENST00000504181 GMNCA6NCL1 334 aa10.04□□□□□ -0.8
LSM6-204ENST00000504181 BGNP21810 368 aa10.04□□□□□ -0.8
LSM6-204ENST00000504181 PAICSP22234 425 aaKnown RBP10.04□□□□□ -0.8
LSM6-204ENST00000504181 ALDH3A1P30838 453 aa10.04□□□□□ -0.8
LSM6-204ENST00000504181 ECI1P42126 302 aa10.04□□□□□ -0.8
LSM6-204ENST00000504181 LUMP51884 338 aaPredicted RBP10.04□□□□□ -0.8
LSM6-204ENST00000504181 WDR38Q5JTN6 314 aa10.04□□□□□ -0.8
LSM6-204ENST00000504181 ARMC4Q5T2S8 1044 aa10.04□□□□□ -0.8
LSM6-204ENST00000504181 LINC00114Q6XXX2 140 aa10.04□□□□□ -0.8
LSM6-204ENST00000504181 FOXL2NBQ6ZUU3 175 aa10.04□□□□□ -0.8
LSM6-204ENST00000504181 OVCH2Q7RTZ1 564 aa10.04□□□□□ -0.8
LSM6-204ENST00000504181 SYT9Q86SS6 491 aa10.04□□□□□ -0.8
LSM6-204ENST00000504181 BCL2L10Q9HD36 194 aa10.04□□□□□ -0.8
LSM6-204ENST00000504181 INIPQ9NRY2 104 aa10.04□□□□□ -0.8
LSM6-204ENST00000504181 SMAD5-AS1Q9Y6J3 95 aa10.04□□□□□ -0.8
LSM6-204ENST00000504181 hCG_1807616A0A1W2PRN6 198 aa10.03□□□□□ -0.8
LSM6-204ENST00000504181 A6NDX4 124 aa10.03□□□□□ -0.8
LSM6-204ENST00000504181 NKX6-3A6NJ46 265 aa10.03□□□□□ -0.8
LSM6-204ENST00000504181 M0R1W7 72 aa10.03□□□□□ -0.8
LSM6-204ENST00000504181 COPEO14579 308 aa10.03□□□□□ -0.8
LSM6-204ENST00000504181 RFXANKO14593 260 aa10.03□□□□□ -0.8
LSM6-204ENST00000504181 NDUFB3O43676 98 aa10.03□□□□□ -0.8
LSM6-204ENST00000504181 SASH3O75995 380 aa10.03□□□□□ -0.8
LSM6-204ENST00000504181 NR2C1P13056 603 aa10.03□□□□□ -0.8
LSM6-204ENST00000504181 SNRPBP14678 240 aaKnown RBP10.03□□□□□ -0.8
LSM6-204ENST00000504181 UFM1P61960 85 aa10.03□□□□□ -0.8
LSM6-204ENST00000504181 SCRN3Q0VDG4 424 aa10.03□□□□□ -0.8
LSM6-204ENST00000504181 LAPTM4AQ15012 233 aa10.03□□□□□ -0.8
LSM6-204ENST00000504181 OR8G1Q15617 311 aa10.03□□□□□ -0.8
LSM6-204ENST00000504181 GTDC1Q4AE62 458 aa10.03□□□□□ -0.8
LSM6-204ENST00000504181 RABL3Q5HYI8 236 aa10.03□□□□□ -0.8
LSM6-204ENST00000504181 HHATQ5VTY9 493 aa10.03□□□□□ -0.8
LSM6-204ENST00000504181 TEX36Q5VZQ5 186 aa10.03□□□□□ -0.8
LSM6-204ENST00000504181 C8orf74Q6P047 294 aa10.03□□□□□ -0.8
LSM6-204ENST00000504181 TTC33Q6PID6 262 aaPredicted RBP10.03□□□□□ -0.8
LSM6-204ENST00000504181 DHRS4L2Q6PKH6 230 aa10.03□□□□□ -0.8
LSM6-204ENST00000504181 HCAR1Q9BXC0 346 aa10.03□□□□□ -0.8
LSM6-204ENST00000504181 TSPYL1Q9H0U9 437 aa10.03□□□□□ -0.8
LSM6-204ENST00000504181 TPT1P8Q9HAU6 139 aa10.03□□□□□ -0.8
LSM6-204ENST00000504181 EDA2RQ9HAV5 297 aa10.03□□□□□ -0.8
LSM6-204ENST00000504181 POLE4Q9NR33 117 aa10.03□□□□□ -0.8
LSM6-204ENST00000504181 STX18Q9P2W9 335 aaKnown RBP10.03□□□□□ -0.8
LSM6-204ENST00000504181 A0A1W2PQ09 198 aa10.02□□□□□ -0.81
LSM6-204ENST00000504181 C5orf58C9J3I9 102 aa10.02□□□□□ -0.81
LSM6-204ENST00000504181 J3QW42 95 aa10.02□□□□□ -0.81
LSM6-204ENST00000504181 CHP2O43745 196 aa10.02□□□□□ -0.81
LSM6-204ENST00000504181 ABHD2P08910 425 aa10.02□□□□□ -0.81
LSM6-204ENST00000504181 SELLP14151 372 aa10.02□□□□□ -0.81
LSM6-204ENST00000504181 CA6P23280 308 aa10.02□□□□□ -0.81
LSM6-204ENST00000504181 IL12AP29459 219 aa10.02□□□□□ -0.81
LSM6-204ENST00000504181 AQP2P41181 271 aa10.02□□□□□ -0.81
LSM6-204ENST00000504181 TOP3AQ13472 1001 aaPredicted RBP10.02□□□□□ -0.81
LSM6-204ENST00000504181 BLMHQ13867 455 aa10.02□□□□□ -0.81
LSM6-204ENST00000504181 NPTX1Q15818 432 aa10.02□□□□□ -0.81
LSM6-204ENST00000504181 SLC36A1Q7Z2H8 476 aa10.02□□□□□ -0.81
LSM6-204ENST00000504181 APOBEC3DQ96AK3 386 aaPredicted RBP10.02□□□□□ -0.81
LSM6-204ENST00000504181 VPS33AQ96AX1 596 aa10.02□□□□□ -0.81
LSM6-204ENST00000504181 LYZL4Q96KX0 146 aa10.02□□□□□ -0.81
LSM6-204ENST00000504181 ADAT1Q9BUB4 502 aaKnown RBP10.02□□□□□ -0.81
LSM6-204ENST00000504181 THUMPD1Q9NXG2 353 aaKnown RBP10.02□□□□□ -0.81
LSM6-204ENST00000504181 MUC4Q99102 2169 aa10.02□□□□□ -0.81
LSM6-204ENST00000504181 A6NLC8 198 aa10.01□□□□□ -0.81
LSM6-204ENST00000504181 CPSF4LA6NMK7 179 aaKnown RBP10.01□□□□□ -0.81
LSM6-204ENST00000504181 H0YAE9 185 aa10.01□□□□□ -0.81
LSM6-204ENST00000504181 ACOT8O14734 319 aa10.01□□□□□ -0.81
LSM6-204ENST00000504181 ANP32DO95626 131 aa10.01□□□□□ -0.81
LSM6-204ENST00000504181 GRPP07492 148 aa10.01□□□□□ -0.81
LSM6-204ENST00000504181 ETS2P15036 469 aa10.01□□□□□ -0.81
LSM6-204ENST00000504181 GSK3BP49841 420 aa10.01□□□□□ -0.81
LSM6-204ENST00000504181 PCK2Q16822 640 aa10.01□□□□□ -0.81
LSM6-204ENST00000504181 LRRC10Q5BKY1 277 aa10.01□□□□□ -0.81
LSM6-204ENST00000504181 OTPQ5XKR4 325 aa10.01□□□□□ -0.81
LSM6-204ENST00000504181 C8orf86Q6ZUL3 223 aa10.01□□□□□ -0.81
LSM6-204ENST00000504181 LHFPL4Q7Z7J7 247 aa10.01□□□□□ -0.81
LSM6-204ENST00000504181 CNPY4Q8N129 248 aa10.01□□□□□ -0.81
LSM6-204ENST00000504181 DYNAPQ8N1N2 210 aa10.01□□□□□ -0.81
LSM6-204ENST00000504181 MOSPD2Q8NHP6 518 aa10.01□□□□□ -0.81
LSM6-204ENST00000504181 RPS4Y2Q8TD47 263 aa10.01□□□□□ -0.81
LSM6-204ENST00000504181 ACOT11Q8WXI4 607 aaPredicted RBP10.01□□□□□ -0.81
LSM6-204ENST00000504181 IFT81Q8WYA0 676 aa10.01□□□□□ -0.81
LSM6-204ENST00000504181 RBP7Q96R05 134 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms