RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 CDKN2AP42771 156 aaKnown RBP5.07□□□□□ -1.6
LSM3P4-201ENST00000502948 ERFP50548 548 aa5.07□□□□□ -1.6
LSM3P4-201ENST00000502948 RAG2P55895 527 aa5.07□□□□□ -1.6
LSM3P4-201ENST00000502948 LCN6P62502 163 aa5.07□□□□□ -1.6
LSM3P4-201ENST00000502948 MALLQ13021 153 aa5.07□□□□□ -1.6
LSM3P4-201ENST00000502948 HLXQ14774 488 aaPredicted RBP5.07□□□□□ -1.6
LSM3P4-201ENST00000502948 PCK2Q16822 640 aa5.07□□□□□ -1.6
LSM3P4-201ENST00000502948 DEFB112Q30KQ8 113 aa5.07□□□□□ -1.6
LSM3P4-201ENST00000502948 RFX4Q33E94 735 aa5.07□□□□□ -1.6
LSM3P4-201ENST00000502948 TEX36Q5VZQ5 186 aa5.07□□□□□ -1.6
LSM3P4-201ENST00000502948 OR2T2Q6IF00 324 aa5.07□□□□□ -1.6
LSM3P4-201ENST00000502948 SLC18B1Q6NT16 456 aa5.07□□□□□ -1.6
LSM3P4-201ENST00000502948 RPL13AP3Q6NVV1 102 aa5.07□□□□□ -1.6
LSM3P4-201ENST00000502948 TBPL2Q6SJ96 375 aa5.07□□□□□ -1.6
LSM3P4-201ENST00000502948 SMARCD3Q6STE5 483 aa5.07□□□□□ -1.6
LSM3P4-201ENST00000502948 ZNF620Q6ZNG0 422 aa5.07□□□□□ -1.6
LSM3P4-201ENST00000502948 C17orf107Q6ZR85 190 aa5.07□□□□□ -1.6
LSM3P4-201ENST00000502948 PTCHD4Q6ZW05 846 aa5.07□□□□□ -1.6
LSM3P4-201ENST00000502948 PGAP1Q75T13 922 aa5.07□□□□□ -1.6
LSM3P4-201ENST00000502948 SPATC1Q76KD6 591 aa5.07□□□□□ -1.6
LSM3P4-201ENST00000502948 HDXQ7Z353 690 aa5.07□□□□□ -1.6
LSM3P4-201ENST00000502948 VTCN1Q7Z7D3 282 aa5.07□□□□□ -1.6
LSM3P4-201ENST00000502948 OR6V1Q8N148 313 aa5.07□□□□□ -1.6
LSM3P4-201ENST00000502948 OR10AD1Q8NGE0 317 aa5.07□□□□□ -1.6
LSM3P4-201ENST00000502948 ZNF420Q8TAQ5 688 aaPredicted RBP5.07□□□□□ -1.6
LSM3P4-201ENST00000502948 TBC1D15Q8TC07 691 aa5.07□□□□□ -1.6
LSM3P4-201ENST00000502948 GATAD2BQ8WXI9 593 aa5.07□□□□□ -1.6
LSM3P4-201ENST00000502948 LRTOMTQ8WZ04 291 aa5.07□□□□□ -1.6
LSM3P4-201ENST00000502948 ZBTB9Q96C00 473 aa5.07□□□□□ -1.6
LSM3P4-201ENST00000502948 C12orf43Q96C57 262 aaKnown RBP5.07□□□□□ -1.6
LSM3P4-201ENST00000502948 ATF6BQ99941 703 aa5.07□□□□□ -1.6
LSM3P4-201ENST00000502948 TRIM15Q9C019 465 aa5.07□□□□□ -1.6
LSM3P4-201ENST00000502948 DNTTIP1Q9H147 329 aa5.07□□□□□ -1.6
LSM3P4-201ENST00000502948 C16orf95Q9H693 158 aa5.07□□□□□ -1.6
LSM3P4-201ENST00000502948 CCDC134Q9H6E4 229 aa5.07□□□□□ -1.6
LSM3P4-201ENST00000502948 FN3KRPQ9HA64 309 aa5.07□□□□□ -1.6
LSM3P4-201ENST00000502948 EFCAB1Q9HAE3 211 aa5.07□□□□□ -1.6
LSM3P4-201ENST00000502948 PNRC2Q9NPJ4 139 aaKnown RBP5.07□□□□□ -1.6
LSM3P4-201ENST00000502948 ACOXLQ9NUZ1 547 aa5.07□□□□□ -1.6
LSM3P4-201ENST00000502948 CMTM6Q9NX76 183 aa5.07□□□□□ -1.6
LSM3P4-201ENST00000502948 NDUFAF4Q9P032 175 aa5.07□□□□□ -1.6
LSM3P4-201ENST00000502948 ERVK-18Q9QC07 812 aa5.07□□□□□ -1.6
LSM3P4-201ENST00000502948 RNF7Q9UBF6 113 aa5.07□□□□□ -1.6
LSM3P4-201ENST00000502948 B9D1Q9UPM9 204 aa5.07□□□□□ -1.6
LSM3P4-201ENST00000502948 SAMD4AQ9UPU9 718 aaKnown RBP5.07□□□□□ -1.6
LSM3P4-201ENST00000502948 KPTNQ9Y664 436 aa5.07□□□□□ -1.6
LSM3P4-201ENST00000502948 IGHV1-69DA0A0B4J2H0 117 aa5.06□□□□□ -1.6
LSM3P4-201ENST00000502948 LOC100653049A0A140TA62 436 aa5.06□□□□□ -1.6
LSM3P4-201ENST00000502948 A0A1B0GVI7 797 aa5.06□□□□□ -1.6
LSM3P4-201ENST00000502948 C5orf63A6NC05 138 aa5.06□□□□□ -1.6
LSM3P4-201ENST00000502948 OOEPA6NGQ2 149 aa5.06□□□□□ -1.6
LSM3P4-201ENST00000502948 C22orf46C9J442 243 aa5.06□□□□□ -1.6
LSM3P4-201ENST00000502948 F5H5P2 479 aa5.06□□□□□ -1.6
LSM3P4-201ENST00000502948 H0YL77 283 aa5.06□□□□□ -1.6
LSM3P4-201ENST00000502948 LGALS8O00214 317 aa5.06□□□□□ -1.6
LSM3P4-201ENST00000502948 DCTN6O00399 190 aa5.06□□□□□ -1.6
LSM3P4-201ENST00000502948 NME4O00746 187 aa5.06□□□□□ -1.6
LSM3P4-201ENST00000502948 TIPRLO75663 272 aa5.06□□□□□ -1.6
LSM3P4-201ENST00000502948 TSPAN9O75954 239 aa5.06□□□□□ -1.6
LSM3P4-201ENST00000502948 KRT34O76011 436 aa5.06□□□□□ -1.6
LSM3P4-201ENST00000502948 TOX4O94842 621 aa5.06□□□□□ -1.6
LSM3P4-201ENST00000502948 RENP00797 406 aa5.06□□□□□ -1.6
LSM3P4-201ENST00000502948 SERPINA1P01009 418 aa5.06□□□□□ -1.6
LSM3P4-201ENST00000502948 IGHV1-69P01742 117 aa5.06□□□□□ -1.6
LSM3P4-201ENST00000502948 DBHP09172 617 aa5.06□□□□□ -1.6
LSM3P4-201ENST00000502948 MUC1P15941 1255 aaPredicted RBP5.06□□□□□ -1.6
LSM3P4-201ENST00000502948 SLC6A6P31641 620 aa5.06□□□□□ -1.6
LSM3P4-201ENST00000502948 GPR4P46093 362 aa5.06□□□□□ -1.6
LSM3P4-201ENST00000502948 IER3P46695 156 aa5.06□□□□□ -1.6
LSM3P4-201ENST00000502948 CENPAP49450 140 aa5.06□□□□□ -1.6
LSM3P4-201ENST00000502948 TPTEP56180 551 aa5.06□□□□□ -1.6
LSM3P4-201ENST00000502948 PROK1P58294 105 aa5.06□□□□□ -1.6
LSM3P4-201ENST00000502948 SMIM11AP58511 58 aa5.06□□□□□ -1.6
LSM3P4-201ENST00000502948 FGF12P61328 243 aa5.06□□□□□ -1.6
LSM3P4-201ENST00000502948 RELBQ01201 579 aa5.06□□□□□ -1.6
LSM3P4-201ENST00000502948 LIPEQ05469 1076 aa5.06□□□□□ -1.6
LSM3P4-201ENST00000502948 TRAP1Q12931 704 aaKnown RBP5.06□□□□□ -1.6
LSM3P4-201ENST00000502948 SNCBQ16143 134 aa5.06□□□□□ -1.6
LSM3P4-201ENST00000502948 TEX30Q5JUR7 227 aa5.06□□□□□ -1.6
LSM3P4-201ENST00000502948 ATPAF1Q5TC12 328 aaPredicted RBP5.06□□□□□ -1.6
LSM3P4-201ENST00000502948 METTL11BQ5VVY1 283 aa5.06□□□□□ -1.6
LSM3P4-201ENST00000502948 C1orf94Q6P1W5 598 aa5.06□□□□□ -1.6
LSM3P4-201ENST00000502948 C11orf88Q6PI97 169 aa5.06□□□□□ -1.6
LSM3P4-201ENST00000502948 FIP1L1Q6UN15 594 aaKnown RBP5.06□□□□□ -1.6
LSM3P4-201ENST00000502948 DRAM2Q6UX65 266 aa5.06□□□□□ -1.6
LSM3P4-201ENST00000502948 GDPGP1Q6ZNW5 385 aa5.06□□□□□ -1.6
LSM3P4-201ENST00000502948 C1orf122Q6ZSJ8 110 aa5.06□□□□□ -1.6
LSM3P4-201ENST00000502948 FKBP9P1Q75LS8 142 aa5.06□□□□□ -1.6
LSM3P4-201ENST00000502948 MOGAT3Q86VF5 341 aa5.06□□□□□ -1.6
LSM3P4-201ENST00000502948 GALNT4Q8N4A0 578 aa5.06□□□□□ -1.6
LSM3P4-201ENST00000502948 LINC00471Q8N535 108 aa5.06□□□□□ -1.6
LSM3P4-201ENST00000502948 KIR3DL3Q8N743 410 aa5.06□□□□□ -1.6
LSM3P4-201ENST00000502948 DTX3Q8N9I9 347 aa5.06□□□□□ -1.6
LSM3P4-201ENST00000502948 ZSCAN4Q8NAM6 433 aaPredicted RBP5.06□□□□□ -1.6
LSM3P4-201ENST00000502948 LY6G5BQ8NDX9 201 aa5.06□□□□□ -1.6
LSM3P4-201ENST00000502948 OR4C15Q8NGM1 316 aa5.06□□□□□ -1.6
LSM3P4-201ENST00000502948 SLC7A6Q92536 515 aa5.06□□□□□ -1.6
LSM3P4-201ENST00000502948 SPTSSAQ969W0 71 aa5.06□□□□□ -1.6
LSM3P4-201ENST00000502948 ZDHHC16Q969W1 377 aa5.06□□□□□ -1.6
LSM3P4-201ENST00000502948 SPSB4Q96A44 273 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms