RNA–Protein interactions for RNA: ENST00000498722.2

LMNA-217, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 1,348 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-217ENST00000498722 PAMR1Q6UXH9 720 aa14.06□□□□□ -0.16
LMNA-217ENST00000498722 MCFD2Q8NI22 146 aa14.06□□□□□ -0.16
LMNA-217ENST00000498722 TRMT61AQ96FX7 289 aaKnown RBP14.06□□□□□ -0.16
LMNA-217ENST00000498722 FOXB1Q99853 325 aa14.06□□□□□ -0.16
LMNA-217ENST00000498722 SLIRPQ9GZT3 109 aaKnown RBP14.06□□□□□ -0.16
LMNA-217ENST00000498722 OBP2BQ9NPH6 170 aa14.06□□□□□ -0.16
LMNA-217ENST00000498722 ACOXLQ9NUZ1 547 aa14.06□□□□□ -0.16
LMNA-217ENST00000498722 KCNG2Q9UJ96 466 aa14.06□□□□□ -0.16
LMNA-217ENST00000498722 POU2F3Q9UKI9 436 aa14.06□□□□□ -0.16
LMNA-217ENST00000498722 IKZF2Q9UKS7 526 aa14.06□□□□□ -0.16
LMNA-217ENST00000498722 SIRT4Q9Y6E7 314 aaPredicted RBP14.06□□□□□ -0.16
LMNA-217ENST00000498722 TRBV2A0A0J9YWF9 115 aa14.05□□□□□ -0.16
LMNA-217ENST00000498722 VGLL3A8MV65 326 aa14.05□□□□□ -0.16
LMNA-217ENST00000498722 RAF1P04049 648 aa14.05□□□□□ -0.16
LMNA-217ENST00000498722 CD79AP11912 226 aa14.05□□□□□ -0.16
LMNA-217ENST00000498722 PTAFRP25105 342 aa14.05□□□□□ -0.16
LMNA-217ENST00000498722 GDI2P50395 445 aaKnown RBP14.05□□□□□ -0.16
LMNA-217ENST00000498722 RORCP51449 518 aa14.05□□□□□ -0.16
LMNA-217ENST00000498722 ZNF84P51523 738 aa14.05□□□□□ -0.16
LMNA-217ENST00000498722 SLC3A1Q07837 685 aa14.05□□□□□ -0.16
LMNA-217ENST00000498722 EIF2B1Q14232 305 aaKnown RBP14.05□□□□□ -0.16
LMNA-217ENST00000498722 PCK2Q16822 640 aa14.05□□□□□ -0.16
LMNA-217ENST00000498722 SLC22A25Q6T423 547 aa14.05□□□□□ -0.16
LMNA-217ENST00000498722 S100ZQ8WXG8 99 aa14.05□□□□□ -0.16
LMNA-217ENST00000498722 NSMAFQ92636 917 aa14.05□□□□□ -0.16
LMNA-217ENST00000498722 AKAP1Q92667 903 aaKnown RBP eCLIP14.05□□□□□ -0.16
LMNA-217ENST00000498722 MCHR2Q969V1 340 aa14.05□□□□□ -0.16
LMNA-217ENST00000498722 PGLYRP3Q96LB9 341 aa14.05□□□□□ -0.16
LMNA-217ENST00000498722 OR8B4Q96RC9 309 aa14.05□□□□□ -0.16
LMNA-217ENST00000498722 KCNS3Q9BQ31 491 aa14.05□□□□□ -0.16
LMNA-217ENST00000498722 CDADC1Q9BWV3 514 aa14.05□□□□□ -0.16
LMNA-217ENST00000498722 MROQ9BYG7 248 aa14.05□□□□□ -0.16
LMNA-217ENST00000498722 NXF2Q9GZY0 626 aaKnown RBP14.05□□□□□ -0.16
LMNA-217ENST00000498722 NELFAQ9H3P2 528 aa14.05□□□□□ -0.16
LMNA-217ENST00000498722 MRM2Q9UI43 246 aaKnown RBP14.05□□□□□ -0.16
LMNA-217ENST00000498722 KLHDC2Q9Y2U9 406 aa14.05□□□□□ -0.16
LMNA-217ENST00000498722 CSMD2Q7Z408 3487 aa14.04□□□□□ -0.16
LMNA-217ENST00000498722 IGKV1D-43A0A0B4J1Z2 117 aa14.04□□□□□ -0.16
LMNA-217ENST00000498722 A0A1W2PPL8 197 aa14.04□□□□□ -0.16
LMNA-217ENST00000498722 DHHO43323 396 aa14.04□□□□□ -0.16
LMNA-217ENST00000498722 CDRT1O95170 752 aa14.04□□□□□ -0.16
LMNA-217ENST00000498722 ABHD16AO95870 558 aa14.04□□□□□ -0.16
LMNA-217ENST00000498722 OR8G3PP0DMU2 310 aa14.04□□□□□ -0.16
LMNA-217ENST00000498722 CD40P25942 277 aa14.04□□□□□ -0.16
LMNA-217ENST00000498722 GUCA1AP43080 201 aaPredicted RBP14.04□□□□□ -0.16
LMNA-217ENST00000498722 ZNF133P52736 654 aaPredicted RBP14.04□□□□□ -0.16
LMNA-217ENST00000498722 ROM1Q03395 351 aa14.04□□□□□ -0.16
LMNA-217ENST00000498722 SPOCK1Q08629 439 aa14.04□□□□□ -0.16
LMNA-217ENST00000498722 C10orf128Q5T292 105 aa14.04□□□□□ -0.16
LMNA-217ENST00000498722 C1QTNF12Q5T7M4 302 aa14.04□□□□□ -0.16
LMNA-217ENST00000498722 LIPNQ5VXI9 398 aa14.04□□□□□ -0.16
LMNA-217ENST00000498722 LRFN4Q6PJG9 635 aa14.04□□□□□ -0.16
LMNA-217ENST00000498722 KRT77Q7Z794 578 aa14.04□□□□□ -0.16
LMNA-217ENST00000498722 ZNF679Q8IYX0 411 aa14.04□□□□□ -0.16
LMNA-217ENST00000498722 RPS4Y2Q8TD47 263 aa14.04□□□□□ -0.16
LMNA-217ENST00000498722 NANOS1Q8WY41 292 aaKnown RBP14.04□□□□□ -0.16
LMNA-217ENST00000498722 RADILQ96JH8 1075 aa14.04□□□□□ -0.16
LMNA-217ENST00000498722 FOXN4Q96NZ1 517 aa14.04□□□□□ -0.16
LMNA-217ENST00000498722 CRNNQ9UBG3 495 aaPredicted RBP14.04□□□□□ -0.16
LMNA-217ENST00000498722 GRIP1Q9Y3R0 1128 aa14.04□□□□□ -0.16
LMNA-217ENST00000498722 ARPC4-TTLL3A0A0A6YYG9 625 aa14.03□□□□□ -0.16
LMNA-217ENST00000498722 HS3ST1O14792 307 aa14.03□□□□□ -0.16
LMNA-217ENST00000498722 MAGEB4O15481 346 aaPredicted RBP14.03□□□□□ -0.16
LMNA-217ENST00000498722 ZNF254O75437 659 aa14.03□□□□□ -0.16
LMNA-217ENST00000498722 GATBO75879 557 aaKnown RBP14.03□□□□□ -0.16
LMNA-217ENST00000498722 FARS2O95363 451 aaKnown RBP14.03□□□□□ -0.16
LMNA-217ENST00000498722 HLA-HP01893 362 aa14.03□□□□□ -0.16
LMNA-217ENST00000498722 HOXB1P14653 301 aaPredicted RBP14.03□□□□□ -0.16
LMNA-217ENST00000498722 RPS19P39019 145 aaKnown RBP14.03□□□□□ -0.16
LMNA-217ENST00000498722 PSMB10P40306 273 aa14.03□□□□□ -0.16
LMNA-217ENST00000498722 RIDAP52758 137 aaKnown RBP14.03□□□□□ -0.16
LMNA-217ENST00000498722 ALKBH1Q13686 389 aaKnown RBP14.03□□□□□ -0.16
LMNA-217ENST00000498722 KCNMB1Q16558 191 aa14.03□□□□□ -0.16
LMNA-217ENST00000498722 MEP1BQ16820 701 aa14.03□□□□□ -0.16
LMNA-217ENST00000498722 DEGS2Q6QHC5 323 aa14.03□□□□□ -0.16
LMNA-217ENST00000498722 TMEM91Q6ZNR0 172 aa14.03□□□□□ -0.16
LMNA-217ENST00000498722 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.03□□□□□ -0.16
LMNA-217ENST00000498722 CCDC36Q8IYA8 594 aa14.03□□□□□ -0.16
LMNA-217ENST00000498722 ABHD4Q8TB40 342 aa14.03□□□□□ -0.16
LMNA-217ENST00000498722 C11orf40Q8WZ69 217 aa14.03□□□□□ -0.16
LMNA-217ENST00000498722 PHYHIPQ92561 330 aa14.03□□□□□ -0.16
LMNA-217ENST00000498722 HTRA1Q92743 480 aa14.03□□□□□ -0.16
LMNA-217ENST00000498722 GHSRQ92847 366 aa14.03□□□□□ -0.16
LMNA-217ENST00000498722 NEUROG1Q92886 237 aa14.03□□□□□ -0.16
LMNA-217ENST00000498722 BOD1Q96IK1 185 aa14.03□□□□□ -0.16
LMNA-217ENST00000498722 CCL19Q99731 98 aa14.03□□□□□ -0.16
LMNA-217ENST00000498722 TMEM204Q9BSN7 226 aa14.03□□□□□ -0.16
LMNA-217ENST00000498722 ABHD6Q9BV23 337 aa14.03□□□□□ -0.16
LMNA-217ENST00000498722 ARID1AO14497 2285 aa14.03□□□□□ -0.16
LMNA-217ENST00000498722 A0A075B6Q4 140 aa14.02□□□□□ -0.17
LMNA-217ENST00000498722 PRR32B1ATL7 298 aa14.02□□□□□ -0.17
LMNA-217ENST00000498722 PSMD9O00233 223 aa14.02□□□□□ -0.17
LMNA-217ENST00000498722 RPP14O95059 124 aaKnown RBP14.02□□□□□ -0.17
LMNA-217ENST00000498722 MPZL1O95297 269 aa14.02□□□□□ -0.17
LMNA-217ENST00000498722 MYL9P24844 172 aa14.02□□□□□ -0.17
LMNA-217ENST00000498722 S100A5P33763 92 aa14.02□□□□□ -0.17
LMNA-217ENST00000498722 RPS27P42677 84 aaKnown RBP14.02□□□□□ -0.17
LMNA-217ENST00000498722 MTNR1BP49286 362 aa14.02□□□□□ -0.17
LMNA-217ENST00000498722 IDH3GP51553 393 aaPredicted RBP14.02□□□□□ -0.17
LMNA-217ENST00000498722 YIF1BQ5BJH7 314 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms