RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 PSMD5Q16401 504 aa2.72□□□□□ -1.97
VPS36-206ENST00000497149 SNRNP35Q16560 246 aaKnown RBP2.72□□□□□ -1.97
VPS36-206ENST00000497149 SMUG1Q53HV7 270 aa2.72□□□□□ -1.97
VPS36-206ENST00000497149 XKR4Q5GH76 650 aa2.72□□□□□ -1.97
VPS36-206ENST00000497149 BHLHA15Q7RTS1 189 aaPredicted RBP2.72□□□□□ -1.97
VPS36-206ENST00000497149 CALHM1Q8IU99 346 aa2.72□□□□□ -1.97
VPS36-206ENST00000497149 NKAIN4Q8IVV8 208 aa2.72□□□□□ -1.97
VPS36-206ENST00000497149 RNF10Q8N5U6 811 aaKnown RBP2.72□□□□□ -1.97
VPS36-206ENST00000497149 ZNF709Q8N972 641 aa2.72□□□□□ -1.97
VPS36-206ENST00000497149 CLHC1Q8NHS4 586 aa2.72□□□□□ -1.97
VPS36-206ENST00000497149 NRGNQ92686 78 aa2.72□□□□□ -1.97
VPS36-206ENST00000497149 PEX13Q92968 403 aa2.72□□□□□ -1.97
VPS36-206ENST00000497149 ISG20Q96AZ6 181 aaKnown RBP2.72□□□□□ -1.97
VPS36-206ENST00000497149 C8orf44Q96CB5 159 aa2.72□□□□□ -1.97
VPS36-206ENST00000497149 NEURL3Q96EH8 262 aa2.72□□□□□ -1.97
VPS36-206ENST00000497149 COL21A1Q96P44 957 aa2.72□□□□□ -1.97
VPS36-206ENST00000497149 CAMK2N2Q96S95 79 aa2.72□□□□□ -1.97
VPS36-206ENST00000497149 ANKRD60Q9BZ19 345 aa2.72□□□□□ -1.97
VPS36-206ENST00000497149 GEMIN7Q9H840 131 aaKnown RBP2.72□□□□□ -1.97
VPS36-206ENST00000497149 PSTPIP2Q9H939 334 aa2.72□□□□□ -1.97
VPS36-206ENST00000497149 EDA2RQ9HAV5 297 aa2.72□□□□□ -1.97
VPS36-206ENST00000497149 RETNQ9HD89 108 aa2.72□□□□□ -1.97
VPS36-206ENST00000497149 ZDHHC4Q9NPG8 344 aa2.72□□□□□ -1.97
VPS36-206ENST00000497149 AGPAT3Q9NRZ7 376 aa2.72□□□□□ -1.97
VPS36-206ENST00000497149 LYARQ9NX58 379 aaKnown RBP2.72□□□□□ -1.97
VPS36-206ENST00000497149 GCNT4Q9P109 453 aa2.72□□□□□ -1.97
VPS36-206ENST00000497149 DUX4Q9UBX2 424 aa2.72□□□□□ -1.97
VPS36-206ENST00000497149 PLA2R1Q13018 1463 aa2.71□□□□□ -1.97
VPS36-206ENST00000497149 MYO3BQ8WXR4 1341 aa2.71□□□□□ -1.98
VPS36-206ENST00000497149 KIF26AQ9ULI4 1882 aaPredicted RBP2.71□□□□□ -1.98
VPS36-206ENST00000497149 TRAV6A0A075B6T7 132 aa2.71□□□□□ -1.98
VPS36-206ENST00000497149 LOC100506127A0A0U1RQW1 187 aa2.71□□□□□ -1.98
VPS36-206ENST00000497149 BPY2O14599 106 aa2.71□□□□□ -1.98
VPS36-206ENST00000497149 TRDMT1O14717 391 aaKnown RBP2.71□□□□□ -1.98
VPS36-206ENST00000497149 CHMP2AO43633 222 aa2.71□□□□□ -1.98
VPS36-206ENST00000497149 FOXH1O75593 365 aa2.71□□□□□ -1.98
VPS36-206ENST00000497149 AQP8O94778 261 aa2.71□□□□□ -1.98
VPS36-206ENST00000497149 KLHL2O95198 593 aa2.71□□□□□ -1.98
VPS36-206ENST00000497149 ERGP11308 486 aa2.71□□□□□ -1.98
VPS36-206ENST00000497149 CPN2P22792 545 aa2.71□□□□□ -1.98
VPS36-206ENST00000497149 U2AF2P26368 475 aaKnown RBP eCLIP2.71□□□□□ -1.98
VPS36-206ENST00000497149 OR1E1P30953 314 aa2.71□□□□□ -1.98
VPS36-206ENST00000497149 UQCRFS1P47985 274 aa2.71□□□□□ -1.98
VPS36-206ENST00000497149 PPP1CBP62140 327 aa2.71□□□□□ -1.98
VPS36-206ENST00000497149 UBE2IP63279 158 aaKnown RBP2.71□□□□□ -1.98
VPS36-206ENST00000497149 DR1Q01658 176 aa2.71□□□□□ -1.98
VPS36-206ENST00000497149 SEMG2Q02383 582 aa2.71□□□□□ -1.98
VPS36-206ENST00000497149 NCF4Q15080 339 aa2.71□□□□□ -1.98
VPS36-206ENST00000497149 Q3ZCU0 254 aa2.71□□□□□ -1.98
VPS36-206ENST00000497149 CHRFAM7AQ494W8 412 aa2.71□□□□□ -1.98
VPS36-206ENST00000497149 AVPI1Q5T686 147 aa2.71□□□□□ -1.98
VPS36-206ENST00000497149 TMEM220Q6QAJ8 160 aa2.71□□□□□ -1.98
VPS36-206ENST00000497149 TRMT10CQ7L0Y3 403 aaKnown RBP2.71□□□□□ -1.98
VPS36-206ENST00000497149 LGI3Q8N145 548 aa2.71□□□□□ -1.98
VPS36-206ENST00000497149 COMMD1Q8N668 190 aa2.71□□□□□ -1.98
VPS36-206ENST00000497149 CHST4Q8NCG5 386 aa2.71□□□□□ -1.98
VPS36-206ENST00000497149 OR52E2Q8NGJ4 325 aa2.71□□□□□ -1.98
VPS36-206ENST00000497149 OR5K2Q8NHB8 316 aa2.71□□□□□ -1.98
VPS36-206ENST00000497149 ZNF461Q8TAF7 563 aa2.71□□□□□ -1.98
VPS36-206ENST00000497149 PDCD6IPQ8WUM4 868 aaKnown RBP2.71□□□□□ -1.98
VPS36-206ENST00000497149 LRRC29Q8WV35 223 aa2.71□□□□□ -1.98
VPS36-206ENST00000497149 TSEN15Q8WW01 171 aaKnown RBP2.71□□□□□ -1.98
VPS36-206ENST00000497149 RGP1Q92546 391 aaPredicted RBP2.71□□□□□ -1.98
VPS36-206ENST00000497149 FLYWCH2Q96CP2 140 aaKnown RBP2.71□□□□□ -1.98
VPS36-206ENST00000497149 WFDC1Q9HC57 220 aa2.71□□□□□ -1.98
VPS36-206ENST00000497149 MED4Q9NPJ6 270 aa2.71□□□□□ -1.98
VPS36-206ENST00000497149 ATPIF1Q9UII2 106 aa2.71□□□□□ -1.98
VPS36-206ENST00000497149 HYOU1Q9Y4L1 999 aa2.71□□□□□ -1.98
VPS36-206ENST00000497149 TSSC4Q9Y5U2 329 aaPredicted RBP2.71□□□□□ -1.98
VPS36-206ENST00000497149 TNIKQ9UKE5 1360 aa2.71□□□□□ -1.98
VPS36-206ENST00000497149 CABIN1Q9Y6J0 2220 aa2.7□□□□□ -1.98
VPS36-206ENST00000497149 COLCA2A8K830 154 aa2.7□□□□□ -1.98
VPS36-206ENST00000497149 H7C417 338 aa2.7□□□□□ -1.98
VPS36-206ENST00000497149 K7EMT4 169 aa2.7□□□□□ -1.98
VPS36-206ENST00000497149 RAD51CO43502 376 aa2.7□□□□□ -1.98
VPS36-206ENST00000497149 CCNB2O95067 398 aa2.7□□□□□ -1.98
VPS36-206ENST00000497149 APOA1P02647 267 aa2.7□□□□□ -1.98
VPS36-206ENST00000497149 SPAM1P38567 509 aa2.7□□□□□ -1.98
VPS36-206ENST00000497149 HAAOP46952 286 aa2.7□□□□□ -1.98
VPS36-206ENST00000497149 OR1G1P47890 313 aa2.7□□□□□ -1.98
VPS36-206ENST00000497149 PLTPP55058 493 aa2.7□□□□□ -1.98
VPS36-206ENST00000497149 PRR3P79522 188 aaKnown RBP2.7□□□□□ -1.98
VPS36-206ENST00000497149 STK38Q15208 465 aa2.7□□□□□ -1.98
VPS36-206ENST00000497149 ANGPT1Q15389 498 aa2.7□□□□□ -1.98
VPS36-206ENST00000497149 SHISA6Q6ZSJ9 500 aa2.7□□□□□ -1.98
VPS36-206ENST00000497149 MBOAT2Q6ZWT7 520 aa2.7□□□□□ -1.98
VPS36-206ENST00000497149 MRPL55Q7Z7F7 128 aaKnown RBP2.7□□□□□ -1.98
VPS36-206ENST00000497149 ERO1BQ86YB8 467 aa2.7□□□□□ -1.98
VPS36-206ENST00000497149 CDKL3Q8IVW4 592 aaPredicted RBP2.7□□□□□ -1.98
VPS36-206ENST00000497149 SLC7A5P1Q8MH63 180 aa2.7□□□□□ -1.98
VPS36-206ENST00000497149 GABRG1Q8N1C3 465 aa2.7□□□□□ -1.98
VPS36-206ENST00000497149 COX18Q8N8Q8 333 aa2.7□□□□□ -1.98
VPS36-206ENST00000497149 C11orf72Q8NBR9 251 aa2.7□□□□□ -1.98
VPS36-206ENST00000497149 OR4K5Q8NGD3 323 aa2.7□□□□□ -1.98
VPS36-206ENST00000497149 OR9G4Q8NGQ1 327 aa2.7□□□□□ -1.98
VPS36-206ENST00000497149 APH1BQ8WW43 257 aa2.7□□□□□ -1.98
VPS36-206ENST00000497149 DEDD2Q8WXF8 326 aa2.7□□□□□ -1.98
VPS36-206ENST00000497149 ANKRD7Q92527 254 aa2.7□□□□□ -1.98
VPS36-206ENST00000497149 ESR2Q92731 530 aa2.7□□□□□ -1.98
VPS36-206ENST00000497149 PTX4Q96A99 478 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms