RNA–Protein interactions for RNA: ENST00000497106.5

USP54-215, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,773 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-215ENST00000497106 GPN1Q9HCN4 374 aaPredicted RBP7.39□□□□□ -1.23
USP54-215ENST00000497106 GPR84Q9NQS5 396 aa7.39□□□□□ -1.23
USP54-215ENST00000497106 MRPL22Q9NWU5 206 aaKnown RBP7.39□□□□□ -1.23
USP54-215ENST00000497106 RAB22AQ9UL26 194 aa7.39□□□□□ -1.23
USP54-215ENST00000497106 J3QW42 95 aa7.39□□□□□ -1.23
USP54-215ENST00000497106 CEACAM4O75871 244 aa7.39□□□□□ -1.23
USP54-215ENST00000497106 IFNA6P05013 189 aa7.39□□□□□ -1.23
USP54-215ENST00000497106 ISG15P05161 165 aa7.39□□□□□ -1.23
USP54-215ENST00000497106 ZNF32P17041 273 aa7.39□□□□□ -1.23
USP54-215ENST00000497106 OR3A2P47893 321 aa7.39□□□□□ -1.23
USP54-215ENST00000497106 GNG2P59768 71 aa7.39□□□□□ -1.23
USP54-215ENST00000497106 P2RY6Q15077 328 aa7.39□□□□□ -1.23
USP54-215ENST00000497106 C9orf135Q5VTT2 229 aa7.39□□□□□ -1.23
USP54-215ENST00000497106 INO80CQ6PI98 192 aaPredicted RBP7.39□□□□□ -1.23
USP54-215ENST00000497106 PEG10Q86TG7 708 aaKnown RBP7.39□□□□□ -1.23
USP54-215ENST00000497106 GGNQ86UU5 652 aa7.39□□□□□ -1.23
USP54-215ENST00000497106 TMEM123Q8N131 208 aa7.39□□□□□ -1.23
USP54-215ENST00000497106 SYNPRQ8TBG9 265 aa7.39□□□□□ -1.23
USP54-215ENST00000497106 OR51E1Q8TCB6 317 aa7.39□□□□□ -1.23
USP54-215ENST00000497106 SPSB1Q96BD6 273 aa7.39□□□□□ -1.23
USP54-215ENST00000497106 WDYHV1Q96HA8 205 aa7.39□□□□□ -1.23
USP54-215ENST00000497106 OR2H1Q9GZK4 316 aa7.39□□□□□ -1.23
USP54-215ENST00000497106 METTL9Q9H1A3 318 aa7.39□□□□□ -1.23
USP54-215ENST00000497106 COQ3Q9NZJ6 369 aa7.39□□□□□ -1.23
USP54-215ENST00000497106 ING4Q9UNL4 249 aa7.39□□□□□ -1.23
USP54-215ENST00000497106 SMIM30A4D0T7 59 aa7.39□□□□□ -1.23
USP54-215ENST00000497106 IFITM5A6NNB3 132 aa7.39□□□□□ -1.23
USP54-215ENST00000497106 J3QRK9 145 aa7.39□□□□□ -1.23
USP54-215ENST00000497106 RBBP9O75884 186 aa7.39□□□□□ -1.23
USP54-215ENST00000497106 FSTP19883 344 aa7.39□□□□□ -1.23
USP54-215ENST00000497106 CBX5P45973 191 aa7.39□□□□□ -1.23
USP54-215ENST00000497106 PLCXD3Q63HM9 321 aa7.39□□□□□ -1.23
USP54-215ENST00000497106 SSX6Q7RTT6 188 aa7.39□□□□□ -1.23
USP54-215ENST00000497106 C17orf78Q8N4C9 275 aa7.39□□□□□ -1.23
USP54-215ENST00000497106 PARP16Q8N5Y8 322 aa7.39□□□□□ -1.23
USP54-215ENST00000497106 OR8S1Q8NH09 359 aa7.39□□□□□ -1.23
USP54-215ENST00000497106 LILRB1Q8NHL6 650 aaPredicted RBP7.39□□□□□ -1.23
USP54-215ENST00000497106 REEP6Q96HR9 211 aa7.39□□□□□ -1.23
USP54-215ENST00000497106 PRDM14Q9GZV8 571 aa7.39□□□□□ -1.23
USP54-215ENST00000497106 MALT1Q9UDY8 824 aa7.39□□□□□ -1.23
USP54-215ENST00000497106 A0A1B0GTH9 108 aa7.39□□□□□ -1.23
USP54-215ENST00000497106 LOC105371267A0A1B0GV96 52 aa7.39□□□□□ -1.23
USP54-215ENST00000497106 UBE2QL1A1L167 161 aa7.39□□□□□ -1.23
USP54-215ENST00000497106 DCTN6O00399 190 aa7.39□□□□□ -1.23
USP54-215ENST00000497106 TM4SF5O14894 197 aa7.39□□□□□ -1.23
USP54-215ENST00000497106 DHRS3O75911 302 aa7.39□□□□□ -1.23
USP54-215ENST00000497106 RAD52P43351 418 aa7.39□□□□□ -1.23
USP54-215ENST00000497106 CLVS2Q5SYC1 327 aa7.39□□□□□ -1.23
USP54-215ENST00000497106 SMAP2Q8WU79 429 aaPredicted RBP7.39□□□□□ -1.23
USP54-215ENST00000497106 ADGRG7Q96K78 797 aa7.39□□□□□ -1.23
USP54-215ENST00000497106 PIGLQ9Y2B2 252 aa7.39□□□□□ -1.23
USP54-215ENST00000497106 TRBV5-5A0A0J9YX44 114 aa7.38□□□□□ -1.23
USP54-215ENST00000497106 A0A0U1RQV5 110 aa7.38□□□□□ -1.23
USP54-215ENST00000497106 PINLYPA6NC86 204 aa7.38□□□□□ -1.23
USP54-215ENST00000497106 RER1O15258 196 aa7.38□□□□□ -1.23
USP54-215ENST00000497106 HPGDSO60760 199 aa7.38□□□□□ -1.23
USP54-215ENST00000497106 CHRM2P08172 466 aa7.38□□□□□ -1.23
USP54-215ENST00000497106 BMP4P12644 408 aa7.38□□□□□ -1.23
USP54-215ENST00000497106 ZNF93P35789 620 aaPredicted RBP7.38□□□□□ -1.23
USP54-215ENST00000497106 RPS27P42677 84 aaKnown RBP7.38□□□□□ -1.23
USP54-215ENST00000497106 SPOCK1Q08629 439 aa7.38□□□□□ -1.23
USP54-215ENST00000497106 ZBTB37Q5TC79 503 aa7.38□□□□□ -1.23
USP54-215ENST00000497106 SIGIRRQ6IA17 410 aa7.38□□□□□ -1.23
USP54-215ENST00000497106 OR5M9Q8NGP3 310 aa7.38□□□□□ -1.23
USP54-215ENST00000497106 OR13C9Q8NGT0 318 aa7.38□□□□□ -1.23
USP54-215ENST00000497106 GPR137Q96N19 417 aa7.38□□□□□ -1.23
USP54-215ENST00000497106 NEDD4LQ96PU5 975 aa7.38□□□□□ -1.23
USP54-215ENST00000497106 NXF2Q9GZY0 626 aaKnown RBP7.38□□□□□ -1.23
USP54-215ENST00000497106 TAS2R4Q9NYW5 299 aa7.38□□□□□ -1.23
USP54-215ENST00000497106 ING1Q9UK53 422 aaPredicted RBP7.38□□□□□ -1.23
USP54-215ENST00000497106 PLEKHA6Q9Y2H5 1048 aa7.38□□□□□ -1.23
USP54-215ENST00000497106 ZNF816-ZNF321PA0A0X1KG74 233 aa7.38□□□□□ -1.23
USP54-215ENST00000497106 DHRS7CA6NNS2 312 aa7.38□□□□□ -1.23
USP54-215ENST00000497106 DISC1C4P0D8 188 aa7.38□□□□□ -1.23
USP54-215ENST00000497106 SLC17A2O00624 439 aa7.38□□□□□ -1.23
USP54-215ENST00000497106 UPK3AO75631 287 aa7.38□□□□□ -1.23
USP54-215ENST00000497106 CLEC2LP0C7M8 214 aa7.38□□□□□ -1.23
USP54-215ENST00000497106 S100GP29377 79 aa7.38□□□□□ -1.23
USP54-215ENST00000497106 ETV6P41212 452 aa7.38□□□□□ -1.23
USP54-215ENST00000497106 RAB1AP62820 205 aa7.38□□□□□ -1.23
USP54-215ENST00000497106 KLRB1Q12918 225 aa7.38□□□□□ -1.23
USP54-215ENST00000497106 Q6ZS92 163 aa7.38□□□□□ -1.23
USP54-215ENST00000497106 C1orf162Q8NEQ5 155 aaPredicted RBP7.38□□□□□ -1.23
USP54-215ENST00000497106 OR56B1Q8NGI3 324 aa7.38□□□□□ -1.23
USP54-215ENST00000497106 OR51A2Q8NGJ7 313 aa7.38□□□□□ -1.23
USP54-215ENST00000497106 LGALS14Q8TCE9 139 aa7.38□□□□□ -1.23
USP54-215ENST00000497106 NEK7Q8TDX7 302 aa7.38□□□□□ -1.23
USP54-215ENST00000497106 FAM3DQ96BQ1 224 aa7.38□□□□□ -1.23
USP54-215ENST00000497106 SFXN3Q9BWM7 321 aa7.38□□□□□ -1.23
USP54-215ENST00000497106 ACTR6Q9GZN1 396 aa7.38□□□□□ -1.23
USP54-215ENST00000497106 AKIP1Q9NQ31 210 aa7.38□□□□□ -1.23
USP54-215ENST00000497106 ZNF275Q9NSD4 429 aaPredicted RBP7.38□□□□□ -1.23
USP54-215ENST00000497106 FRRS1LQ9P0K9 344 aa7.38□□□□□ -1.23
USP54-215ENST00000497106 ZNF716A6NP11 495 aa7.38□□□□□ -1.23
USP54-215ENST00000497106 E9PI62 339 aa7.38□□□□□ -1.23
USP54-215ENST00000497106 H3BSH0 61 aa7.38□□□□□ -1.23
USP54-215ENST00000497106 RPL36A-HNRNPH2H7BZ11 118 aa7.38□□□□□ -1.23
USP54-215ENST00000497106 SS18L1O75177 396 aaPredicted RBP7.38□□□□□ -1.23
USP54-215ENST00000497106 MPZL1O95297 269 aa7.38□□□□□ -1.23
USP54-215ENST00000497106 GPANK1O95872 356 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms