RNA–Protein interactions for RNA: ENST00000496622.1

SSBP1-213, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 2,620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-213ENST00000496622 EFNB1P98172 346 aa5.52□□□□□ -1.53
SSBP1-213ENST00000496622 PLCXD2Q0VAA5 305 aa5.52□□□□□ -1.53
SSBP1-213ENST00000496622 FGFBP1Q14512 234 aa5.52□□□□□ -1.53
SSBP1-213ENST00000496622 DECR1Q16698 335 aa5.52□□□□□ -1.53
SSBP1-213ENST00000496622 KLHL22Q53GT1 634 aa5.52□□□□□ -1.53
SSBP1-213ENST00000496622 EIPR1Q53HC9 387 aa5.52□□□□□ -1.53
SSBP1-213ENST00000496622 RNASE10Q5GAN6 216 aaKnown RBP5.52□□□□□ -1.53
SSBP1-213ENST00000496622 SYT6Q5T7P8 510 aaPredicted RBP5.52□□□□□ -1.53
SSBP1-213ENST00000496622 PLAG1Q6DJT9 500 aa5.52□□□□□ -1.53
SSBP1-213ENST00000496622 SLC23A3Q6PIS1 610 aa5.52□□□□□ -1.53
SSBP1-213ENST00000496622 BIVMQ86UB2 503 aa5.52□□□□□ -1.53
SSBP1-213ENST00000496622 OAFQ86UD1 273 aa5.52□□□□□ -1.53
SSBP1-213ENST00000496622 KDM8Q8N371 416 aa5.52□□□□□ -1.53
SSBP1-213ENST00000496622 OR9Q1Q8NGQ5 310 aa5.52□□□□□ -1.53
SSBP1-213ENST00000496622 OR4K13Q8NH42 304 aa5.52□□□□□ -1.53
SSBP1-213ENST00000496622 ZPLD1Q8TCW7 415 aa5.52□□□□□ -1.53
SSBP1-213ENST00000496622 ZNRF4Q8WWF5 429 aa5.52□□□□□ -1.53
SSBP1-213ENST00000496622 FGF11Q92914 225 aa5.52□□□□□ -1.53
SSBP1-213ENST00000496622 MRGPRFQ96AM1 343 aa5.52□□□□□ -1.53
SSBP1-213ENST00000496622 MVB12AQ96EY5 273 aa5.52□□□□□ -1.53
SSBP1-213ENST00000496622 TRMT61AQ96FX7 289 aaKnown RBP5.52□□□□□ -1.53
SSBP1-213ENST00000496622 ULBP3Q9BZM4 244 aa5.52□□□□□ -1.53
SSBP1-213ENST00000496622 WWTR1Q9GZV5 400 aa5.52□□□□□ -1.53
SSBP1-213ENST00000496622 CHRNA10Q9GZZ6 450 aa5.52□□□□□ -1.53
SSBP1-213ENST00000496622 FN3KQ9H479 309 aa5.52□□□□□ -1.53
SSBP1-213ENST00000496622 BCO1Q9HAY6 547 aa5.52□□□□□ -1.53
SSBP1-213ENST00000496622 SLC25A19Q9HC21 320 aa5.52□□□□□ -1.53
SSBP1-213ENST00000496622 ZFP64Q9NPA5 681 aa5.52□□□□□ -1.53
SSBP1-213ENST00000496622 CCNB1IP1Q9NPC3 277 aa5.52□□□□□ -1.53
SSBP1-213ENST00000496622 ANKRD10Q9NXR5 420 aa5.52□□□□□ -1.53
SSBP1-213ENST00000496622 DKKL1Q9UK85 242 aa5.52□□□□□ -1.53
SSBP1-213ENST00000496622 MED31Q9Y3C7 131 aa5.52□□□□□ -1.53
SSBP1-213ENST00000496622 ZZEF1O43149 2961 aa5.51□□□□□ -1.53
SSBP1-213ENST00000496622 SERPINE3A8MV23 424 aa5.51□□□□□ -1.53
SSBP1-213ENST00000496622 ADAM20O43506 726 aa5.51□□□□□ -1.53
SSBP1-213ENST00000496622 PPP1R3DO95685 299 aa5.51□□□□□ -1.53
SSBP1-213ENST00000496622 LALBAP00709 142 aa5.51□□□□□ -1.53
SSBP1-213ENST00000496622 APEX1P27695 318 aaKnown RBP5.51□□□□□ -1.53
SSBP1-213ENST00000496622 CD200P41217 278 aa5.51□□□□□ -1.53
SSBP1-213ENST00000496622 HTR5AP47898 357 aa5.51□□□□□ -1.53
SSBP1-213ENST00000496622 CEBPGP53567 150 aa5.51□□□□□ -1.53
SSBP1-213ENST00000496622 MLF1P58340 268 aa5.51□□□□□ -1.53
SSBP1-213ENST00000496622 DEFA1P59665 94 aa5.51□□□□□ -1.53
SSBP1-213ENST00000496622 DEFA3P59666 94 aa5.51□□□□□ -1.53
SSBP1-213ENST00000496622 ZNF117Q03924 483 aa5.51□□□□□ -1.53
SSBP1-213ENST00000496622 EGR4Q05215 589 aa5.51□□□□□ -1.53
SSBP1-213ENST00000496622 FHL1Q13642 323 aa5.51□□□□□ -1.53
SSBP1-213ENST00000496622 MSMPQ1L6U9 139 aa5.51□□□□□ -1.53
SSBP1-213ENST00000496622 LIPKQ5VXJ0 399 aa5.51□□□□□ -1.53
SSBP1-213ENST00000496622 HLA-DQA1Q5Y7H0 255 aa5.51□□□□□ -1.53
SSBP1-213ENST00000496622 P2RY8Q86VZ1 359 aa5.51□□□□□ -1.53
SSBP1-213ENST00000496622 FOXRED2Q8IWF2 684 aa5.51□□□□□ -1.53
SSBP1-213ENST00000496622 ATP6V1C2Q8NEY4 427 aa5.51□□□□□ -1.53
SSBP1-213ENST00000496622 OR51G2Q8NGK0 314 aa5.51□□□□□ -1.53
SSBP1-213ENST00000496622 CPT1CQ8TCG5 803 aa5.51□□□□□ -1.53
SSBP1-213ENST00000496622 GNPDA2Q8TDQ7 276 aa5.51□□□□□ -1.53
SSBP1-213ENST00000496622 PAQR8Q8TEZ7 354 aa5.51□□□□□ -1.53
SSBP1-213ENST00000496622 TM9SF4Q92544 642 aa5.51□□□□□ -1.53
SSBP1-213ENST00000496622 DAZLQ92904 295 aaKnown RBP5.51□□□□□ -1.53
SSBP1-213ENST00000496622 RAB24Q969Q5 203 aa5.51□□□□□ -1.53
SSBP1-213ENST00000496622 C3orf49Q96BT1 292 aa5.51□□□□□ -1.53
SSBP1-213ENST00000496622 LGALS12Q96DT0 336 aa5.51□□□□□ -1.53
SSBP1-213ENST00000496622 TSSK2Q96PF2 358 aa5.51□□□□□ -1.53
SSBP1-213ENST00000496622 MGLLQ99685 303 aa5.51□□□□□ -1.53
SSBP1-213ENST00000496622 C7orf50Q9BRJ6 194 aaKnown RBP5.51□□□□□ -1.53
SSBP1-213ENST00000496622 G6PC3Q9BUM1 346 aa5.51□□□□□ -1.53
SSBP1-213ENST00000496622 NGBQ9NPG2 151 aa5.51□□□□□ -1.53
SSBP1-213ENST00000496622 UBQLN4Q9NRR5 601 aa5.51□□□□□ -1.53
SSBP1-213ENST00000496622 PRODH2Q9UF12 536 aa5.51□□□□□ -1.53
SSBP1-213ENST00000496622 SIGLEC7Q9Y286 467 aa5.51□□□□□ -1.53
SSBP1-213ENST00000496622 RHBDD3Q9Y3P4 386 aa5.51□□□□□ -1.53
SSBP1-213ENST00000496622 TMEM200CA6NKL6 621 aa5.51□□□□□ -1.53
SSBP1-213ENST00000496622 A8MXK9 166 aa5.51□□□□□ -1.53
SSBP1-213ENST00000496622 MCIDASD6RGH6 385 aa5.51□□□□□ -1.53
SSBP1-213ENST00000496622 G3V3Y1 287 aa5.51□□□□□ -1.53
SSBP1-213ENST00000496622 SCDO00767 359 aa5.51□□□□□ -1.53
SSBP1-213ENST00000496622 CDX4O14627 284 aaPredicted RBP5.51□□□□□ -1.53
SSBP1-213ENST00000496622 TGOLN2O43493 480 aa5.51□□□□□ -1.53
SSBP1-213ENST00000496622 CRYBA1P05813 215 aa5.51□□□□□ -1.53
SSBP1-213ENST00000496622 MELTFP08582 738 aa5.51□□□□□ -1.53
SSBP1-213ENST00000496622 NBEAP1P0C6P0 100 aa5.51□□□□□ -1.53
SSBP1-213ENST00000496622 BMP7P18075 431 aa5.51□□□□□ -1.53
SSBP1-213ENST00000496622 IL12BP29460 328 aa5.51□□□□□ -1.53
SSBP1-213ENST00000496622 S100A11P31949 105 aa5.51□□□□□ -1.53
SSBP1-213ENST00000496622 CEACAM3P40198 252 aa5.51□□□□□ -1.53
SSBP1-213ENST00000496622 RPS27P42677 84 aaKnown RBP5.51□□□□□ -1.53
SSBP1-213ENST00000496622 EMP2P54851 167 aa5.51□□□□□ -1.53
SSBP1-213ENST00000496622 EXOSC2Q13868 293 aaKnown RBP5.51□□□□□ -1.53
SSBP1-213ENST00000496622 ZNF141Q15928 474 aa5.51□□□□□ -1.53
SSBP1-213ENST00000496622 SSX1Q16384 188 aa5.51□□□□□ -1.53
SSBP1-213ENST00000496622 TATDN3Q17R31 274 aa5.51□□□□□ -1.53
SSBP1-213ENST00000496622 ZNF791Q3KP31 576 aaPredicted RBP5.51□□□□□ -1.53
SSBP1-213ENST00000496622 AVPI1Q5T686 147 aa5.51□□□□□ -1.53
SSBP1-213ENST00000496622 CLEC9AQ6UXN8 241 aa5.51□□□□□ -1.53
SSBP1-213ENST00000496622 CD300LDQ6UXZ3 194 aa5.51□□□□□ -1.53
SSBP1-213ENST00000496622 CHMP1BQ7LBR1 199 aa5.51□□□□□ -1.53
SSBP1-213ENST00000496622 P4HA3Q7Z4N8 544 aa5.51□□□□□ -1.53
SSBP1-213ENST00000496622 RFLNBQ8N5W9 214 aa5.51□□□□□ -1.53
SSBP1-213ENST00000496622 SIRT6Q8N6T7 355 aa5.51□□□□□ -1.53
SSBP1-213ENST00000496622 FAM98AQ8NCA5 519 aaKnown RBP5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms