RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 RNF133Q8WVZ7 376 aa11.58□□□□□ -0.56
PTPN7-217ENST00000495688 EDAQ92838 391 aa11.58□□□□□ -0.56
PTPN7-217ENST00000495688 NARS2Q96I59 477 aaKnown RBP11.58□□□□□ -0.56
PTPN7-217ENST00000495688 ZC4H2Q9NQZ6 224 aa11.58□□□□□ -0.56
PTPN7-217ENST00000495688 RAB22AQ9UL26 194 aa11.58□□□□□ -0.56
PTPN7-217ENST00000495688 MUC3AQ02505 3323 aa11.58□□□□□ -0.56
PTPN7-217ENST00000495688 WDFY4Q6ZS81 3184 aa11.58□□□□□ -0.56
PTPN7-217ENST00000495688 LMO7DNF2Z398 122 aa11.58□□□□□ -0.56
PTPN7-217ENST00000495688 SSX5O60225 188 aa11.58□□□□□ -0.56
PTPN7-217ENST00000495688 PLATP00750 562 aa11.58□□□□□ -0.56
PTPN7-217ENST00000495688 ICAM2P13598 275 aa11.58□□□□□ -0.56
PTPN7-217ENST00000495688 MMP16P51512 607 aa11.58□□□□□ -0.56
PTPN7-217ENST00000495688 AKR1C2P52895 323 aa11.58□□□□□ -0.56
PTPN7-217ENST00000495688 BIDP55957 195 aa11.58□□□□□ -0.56
PTPN7-217ENST00000495688 QRFPP83859 136 aa11.58□□□□□ -0.56
PTPN7-217ENST00000495688 FOXK1P85037 733 aa11.58□□□□□ -0.56
PTPN7-217ENST00000495688 AKR1C1Q04828 323 aa11.58□□□□□ -0.56
PTPN7-217ENST00000495688 FGL1Q08830 312 aa11.58□□□□□ -0.56
PTPN7-217ENST00000495688 FOXF1Q12946 379 aa11.58□□□□□ -0.56
PTPN7-217ENST00000495688 MFAP5Q13361 173 aa11.58□□□□□ -0.56
PTPN7-217ENST00000495688 MOB3CQ70IA8 216 aa11.58□□□□□ -0.56
PTPN7-217ENST00000495688 COX15Q7KZN9 410 aa11.58□□□□□ -0.56
PTPN7-217ENST00000495688 OR2W3Q7Z3T1 314 aa11.58□□□□□ -0.56
PTPN7-217ENST00000495688 NKAIN3Q8N8D7 197 aa11.58□□□□□ -0.56
PTPN7-217ENST00000495688 PRRT1Q99946 306 aa11.58□□□□□ -0.56
PTPN7-217ENST00000495688 SLC22A11Q9NSA0 550 aa11.58□□□□□ -0.56
PTPN7-217ENST00000495688 A0A0A6YYH2 397 aa11.57□□□□□ -0.56
PTPN7-217ENST00000495688 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.57□□□□□ -0.56
PTPN7-217ENST00000495688 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.57□□□□□ -0.56
PTPN7-217ENST00000495688 A0A1W2PP11 408 aa11.57□□□□□ -0.56
PTPN7-217ENST00000495688 A6NJ64 397 aa11.57□□□□□ -0.56
PTPN7-217ENST00000495688 FAM74A7A6NL05 159 aa11.57□□□□□ -0.56
PTPN7-217ENST00000495688 TOR1AO14656 332 aa11.57□□□□□ -0.56
PTPN7-217ENST00000495688 BCL2L11O43521 198 aa11.57□□□□□ -0.56
PTPN7-217ENST00000495688 EFNA2O43921 213 aa11.57□□□□□ -0.56
PTPN7-217ENST00000495688 ABOP16442 354 aa11.57□□□□□ -0.56
PTPN7-217ENST00000495688 CD27P26842 260 aa11.57□□□□□ -0.56
PTPN7-217ENST00000495688 CDAP32320 146 aa11.57□□□□□ -0.56
PTPN7-217ENST00000495688 CSNK1EP49674 416 aaKnown RBP11.57□□□□□ -0.56
PTPN7-217ENST00000495688 MEF2DQ14814 521 aa11.57□□□□□ -0.56
PTPN7-217ENST00000495688 INPP5JQ15735 1006 aaPredicted RBP11.57□□□□□ -0.56
PTPN7-217ENST00000495688 FAM74A3Q4VXF1 159 aa11.57□□□□□ -0.56
PTPN7-217ENST00000495688 TMPPEQ6ZT21 453 aa11.57□□□□□ -0.56
PTPN7-217ENST00000495688 TMEM104Q8NE00 496 aa11.57□□□□□ -0.56
PTPN7-217ENST00000495688 BPIFCQ8NFQ6 507 aa11.57□□□□□ -0.56
PTPN7-217ENST00000495688 OR1M1Q8NGA1 313 aa11.57□□□□□ -0.56
PTPN7-217ENST00000495688 OR51E1Q8TCB6 317 aa11.57□□□□□ -0.56
PTPN7-217ENST00000495688 ASB13Q8WXK3 278 aa11.57□□□□□ -0.56
PTPN7-217ENST00000495688 PBOV1Q9GZY1 135 aa11.57□□□□□ -0.56
PTPN7-217ENST00000495688 CHRNA10Q9GZZ6 450 aa11.57□□□□□ -0.56
PTPN7-217ENST00000495688 PRR13Q9NZ81 148 aa11.57□□□□□ -0.56
PTPN7-217ENST00000495688 MBD2Q9UBB5 411 aa11.57□□□□□ -0.56
PTPN7-217ENST00000495688 MYO7BQ6PIF6 2116 aa11.57□□□□□ -0.56
PTPN7-217ENST00000495688 A6NIZ1 184 aa11.57□□□□□ -0.56
PTPN7-217ENST00000495688 NUDT21O43809 227 aaKnown RBP11.57□□□□□ -0.56
PTPN7-217ENST00000495688 CNR1P21554 472 aa11.57□□□□□ -0.56
PTPN7-217ENST00000495688 CASRP41180 1078 aa11.57□□□□□ -0.56
PTPN7-217ENST00000495688 DAP3P51398 398 aaKnown RBP11.57□□□□□ -0.56
PTPN7-217ENST00000495688 PRKXP51817 358 aa11.57□□□□□ -0.56
PTPN7-217ENST00000495688 CLDN6P56747 220 aa11.57□□□□□ -0.56
PTPN7-217ENST00000495688 RAP1BP61224 184 aa11.57□□□□□ -0.56
PTPN7-217ENST00000495688 RAP1AP62834 184 aa11.57□□□□□ -0.56
PTPN7-217ENST00000495688 AWAT2Q6E213 333 aa11.57□□□□□ -0.56
PTPN7-217ENST00000495688 SYT13Q7L8C5 426 aa11.57□□□□□ -0.56
PTPN7-217ENST00000495688 ANGPTL5Q86XS5 388 aa11.57□□□□□ -0.56
PTPN7-217ENST00000495688 APCDD1LQ8NCL9 501 aa11.57□□□□□ -0.56
PTPN7-217ENST00000495688 TMEM185AQ8NFB2 350 aa11.57□□□□□ -0.56
PTPN7-217ENST00000495688 MARCH1Q8TCQ1 289 aa11.57□□□□□ -0.56
PTPN7-217ENST00000495688 MITD1Q8WV92 249 aa11.57□□□□□ -0.56
PTPN7-217ENST00000495688 ROBO4Q8WZ75 1007 aa11.57□□□□□ -0.56
PTPN7-217ENST00000495688 PTX4Q96A99 478 aa11.57□□□□□ -0.56
PTPN7-217ENST00000495688 LRRC46Q96FV0 321 aa11.57□□□□□ -0.56
PTPN7-217ENST00000495688 SLC2A4RGQ9NR83 387 aa11.57□□□□□ -0.56
PTPN7-217ENST00000495688 FGF21Q9NSA1 209 aa11.57□□□□□ -0.56
PTPN7-217ENST00000495688 SLC2A8Q9NY64 477 aa11.57□□□□□ -0.56
PTPN7-217ENST00000495688 C13orf42A0A1B0GVH6 325 aa11.56□□□□□ -0.56
PTPN7-217ENST00000495688 A0A1B0GX78 115 aa11.56□□□□□ -0.56
PTPN7-217ENST00000495688 F5H0A9 414 aaPredicted RBP11.56□□□□□ -0.56
PTPN7-217ENST00000495688 SULT2B1O00204 365 aa11.56□□□□□ -0.56
PTPN7-217ENST00000495688 EFSO43281 561 aa11.56□□□□□ -0.56
PTPN7-217ENST00000495688 TSPAN9O75954 239 aa11.56□□□□□ -0.56
PTPN7-217ENST00000495688 OR2F2O95006 317 aa11.56□□□□□ -0.56
PTPN7-217ENST00000495688 SLC25A4P12235 298 aa11.56□□□□□ -0.56
PTPN7-217ENST00000495688 RAB6AP20340 208 aa11.56□□□□□ -0.56
PTPN7-217ENST00000495688 BCKDHBP21953 392 aa11.56□□□□□ -0.56
PTPN7-217ENST00000495688 SRSF4Q08170 494 aaKnown RBP11.56□□□□□ -0.56
PTPN7-217ENST00000495688 OR2F1Q13607 317 aa11.56□□□□□ -0.56
PTPN7-217ENST00000495688 ZNF345Q14585 488 aa11.56□□□□□ -0.56
PTPN7-217ENST00000495688 DNM1P34Q6PK57 102 aa11.56□□□□□ -0.56
PTPN7-217ENST00000495688 ACOT7LQ6ZUV0 252 aa11.56□□□□□ -0.56
PTPN7-217ENST00000495688 ZNF101Q8IZC7 436 aa11.56□□□□□ -0.56
PTPN7-217ENST00000495688 TMEM234Q8WY98 164 aa11.56□□□□□ -0.56
PTPN7-217ENST00000495688 SEC61A2Q9H9S3 476 aa11.56□□□□□ -0.56
PTPN7-217ENST00000495688 IFT46Q9NQC8 304 aa11.56□□□□□ -0.56
PTPN7-217ENST00000495688 CYB5R1Q9UHQ9 305 aa11.56□□□□□ -0.56
PTPN7-217ENST00000495688 A0A0A6YYD4 124 aa11.56□□□□□ -0.56
PTPN7-217ENST00000495688 TMEM200CA6NKL6 621 aa11.56□□□□□ -0.56
PTPN7-217ENST00000495688 METTL12A8MUP2 240 aa11.56□□□□□ -0.56
PTPN7-217ENST00000495688 DNASE2O00115 360 aaPredicted RBP11.56□□□□□ -0.56
PTPN7-217ENST00000495688 PPIAP62937 165 aaKnown RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms