RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 J3QW42 95 aa16.6■□□□□ 0.25
HDAC4-212ENST00000495497 TIMM8AO60220 97 aaPredicted RBP16.6■□□□□ 0.25
HDAC4-212ENST00000495497 ATP6V1G2O95670 118 aa16.6■□□□□ 0.25
HDAC4-212ENST00000495497 ANXA2P07355 339 aaKnown RBP16.6■□□□□ 0.25
HDAC4-212ENST00000495497 ATP6V1E1P36543 226 aa16.6■□□□□ 0.25
HDAC4-212ENST00000495497 TMED1Q13445 227 aa16.6■□□□□ 0.25
HDAC4-212ENST00000495497 ZNF691Q5VV52 312 aa16.6■□□□□ 0.25
HDAC4-212ENST00000495497 TTC23Q5W5X9 447 aa16.6■□□□□ 0.25
HDAC4-212ENST00000495497 OR2T2Q6IF00 324 aa16.6■□□□□ 0.25
HDAC4-212ENST00000495497 USP51Q70EK9 711 aa16.6■□□□□ 0.25
HDAC4-212ENST00000495497 SSX6Q7RTT6 188 aa16.6■□□□□ 0.25
HDAC4-212ENST00000495497 OR5AS1Q8N127 324 aa16.6■□□□□ 0.25
HDAC4-212ENST00000495497 HAVCR1Q96D42 359 aa16.6■□□□□ 0.25
HDAC4-212ENST00000495497 APOL4Q9BPW4 351 aa16.6■□□□□ 0.25
HDAC4-212ENST00000495497 RAB1BQ9H0U4 201 aa16.6■□□□□ 0.25
HDAC4-212ENST00000495497 AMBNQ9NP70 447 aa16.6■□□□□ 0.25
HDAC4-212ENST00000495497 PURGQ9UJV8 347 aaKnown RBP16.6■□□□□ 0.25
HDAC4-212ENST00000495497 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.6■□□□□ 0.25
HDAC4-212ENST00000495497 TMEM14AQ9Y6G1 99 aa16.6■□□□□ 0.25
HDAC4-212ENST00000495497 MYO9AB2RTY4 2548 aa16.59■□□□□ 0.25
HDAC4-212ENST00000495497 H3BSA7 217 aa16.59■□□□□ 0.25
HDAC4-212ENST00000495497 TBX1O43435 398 aa16.59■□□□□ 0.25
HDAC4-212ENST00000495497 MPZL2O60487 215 aa16.59■□□□□ 0.25
HDAC4-212ENST00000495497 F12P00748 615 aaPredicted RBP16.59■□□□□ 0.25
HDAC4-212ENST00000495497 TUBG1P23258 451 aa16.59■□□□□ 0.25
HDAC4-212ENST00000495497 CAPGP40121 348 aa16.59■□□□□ 0.25
HDAC4-212ENST00000495497 MTNR1AP48039 350 aa16.59■□□□□ 0.25
HDAC4-212ENST00000495497 MMP15P51511 669 aa16.59■□□□□ 0.25
HDAC4-212ENST00000495497 EFNA4P52798 201 aa16.59■□□□□ 0.25
HDAC4-212ENST00000495497 ZNF121P58317 390 aaPredicted RBP16.59■□□□□ 0.25
HDAC4-212ENST00000495497 POU4F2Q12837 409 aa16.59■□□□□ 0.25
HDAC4-212ENST00000495497 GK2Q14410 553 aaPredicted RBP16.59■□□□□ 0.25
HDAC4-212ENST00000495497 SMN1Q16637 294 aaKnown RBP16.59■□□□□ 0.25
HDAC4-212ENST00000495497 GLYATL3Q5SZD4 288 aa16.59■□□□□ 0.25
HDAC4-212ENST00000495497 SHEQ5VZ18 495 aa16.59■□□□□ 0.25
HDAC4-212ENST00000495497 KCTD18Q6PI47 426 aaPredicted RBP16.59■□□□□ 0.25
HDAC4-212ENST00000495497 ZNF322Q6U7Q0 402 aaPredicted RBP16.59■□□□□ 0.25
HDAC4-212ENST00000495497 FBXW12Q6X9E4 464 aa16.59■□□□□ 0.25
HDAC4-212ENST00000495497 FAM57BQ71RH2 274 aa16.59■□□□□ 0.25
HDAC4-212ENST00000495497 RHOUQ7L0Q8 258 aa16.59■□□□□ 0.25
HDAC4-212ENST00000495497 OR10H4Q8NGA5 316 aa16.59■□□□□ 0.25
HDAC4-212ENST00000495497 CNIH3Q8TBE1 160 aa16.59■□□□□ 0.25
HDAC4-212ENST00000495497 SNX33Q8WV41 574 aa16.59■□□□□ 0.25
HDAC4-212ENST00000495497 ASB17Q8WXJ9 295 aa16.59■□□□□ 0.25
HDAC4-212ENST00000495497 Q96MF0 132 aa16.59■□□□□ 0.25
HDAC4-212ENST00000495497 OR8B4Q96RC9 309 aa16.59■□□□□ 0.25
HDAC4-212ENST00000495497 VCXQ9H320 206 aa16.59■□□□□ 0.25
HDAC4-212ENST00000495497 MS4A5Q9H3V2 200 aa16.59■□□□□ 0.25
HDAC4-212ENST00000495497 MSL2Q9HCI7 577 aa16.59■□□□□ 0.25
HDAC4-212ENST00000495497 TUBG2Q9NRH3 451 aa16.59■□□□□ 0.25
HDAC4-212ENST00000495497 FBXO9Q9UK97 447 aaPredicted RBP16.59■□□□□ 0.25
HDAC4-212ENST00000495497 IKZF2Q9UKS7 526 aa16.59■□□□□ 0.25
HDAC4-212ENST00000495497 ARFGEF3Q5TH69 2177 aa16.59■□□□□ 0.25
HDAC4-212ENST00000495497 ZNF469Q96JG9 3925 aaPredicted RBP16.58■□□□□ 0.25
HDAC4-212ENST00000495497 A0A1W2PQL4 384 aaPredicted RBP16.58■□□□□ 0.24
HDAC4-212ENST00000495497 C17orf100A8MU93 164 aa16.58■□□□□ 0.24
HDAC4-212ENST00000495497 WBP4O75554 376 aaKnown RBP16.58■□□□□ 0.24
HDAC4-212ENST00000495497 GNAO1P09471 354 aa16.58■□□□□ 0.24
HDAC4-212ENST00000495497 RAC2P15153 192 aa16.58■□□□□ 0.24
HDAC4-212ENST00000495497 KITLGP21583 273 aa16.58■□□□□ 0.24
HDAC4-212ENST00000495497 MAGEB1P43366 347 aa16.58■□□□□ 0.24
HDAC4-212ENST00000495497 AQP4P55087 323 aa16.58■□□□□ 0.24
HDAC4-212ENST00000495497 ZNF92Q03936 586 aa16.58■□□□□ 0.24
HDAC4-212ENST00000495497 ZNF91Q05481 1191 aa16.58■□□□□ 0.24
HDAC4-212ENST00000495497 MALLQ13021 153 aa16.58■□□□□ 0.24
HDAC4-212ENST00000495497 MOGQ16653 247 aa16.58■□□□□ 0.24
HDAC4-212ENST00000495497 CLEC12BQ2HXU8 276 aa16.58■□□□□ 0.24
HDAC4-212ENST00000495497 PRSS45Q7RTY3 260 aa16.58■□□□□ 0.24
HDAC4-212ENST00000495497 ZNF525Q8N782 197 aa16.58■□□□□ 0.24
HDAC4-212ENST00000495497 LGALS12Q96DT0 336 aa16.58■□□□□ 0.24
HDAC4-212ENST00000495497 Q96MT0 163 aa16.58■□□□□ 0.24
HDAC4-212ENST00000495497 MNTQ99583 582 aa16.58■□□□□ 0.24
HDAC4-212ENST00000495497 MROQ9BYG7 248 aa16.58■□□□□ 0.24
HDAC4-212ENST00000495497 BARX1Q9HBU1 254 aaPredicted RBP16.58■□□□□ 0.24
HDAC4-212ENST00000495497 ZNF319Q9P2F9 582 aa16.58■□□□□ 0.24
HDAC4-212ENST00000495497 GPR160Q9UJ42 338 aa16.58■□□□□ 0.24
HDAC4-212ENST00000495497 RRP15Q9Y3B9 282 aaKnown RBP16.58■□□□□ 0.24
HDAC4-212ENST00000495497 ZSCAN5BA6NJL1 495 aa16.57■□□□□ 0.24
HDAC4-212ENST00000495497 SPRY3O43610 288 aa16.57■□□□□ 0.24
HDAC4-212ENST00000495497 OR2T7P0C7T2 308 aa16.57■□□□□ 0.24
HDAC4-212ENST00000495497 DBTP11182 482 aaKnown RBP16.57■□□□□ 0.24
HDAC4-212ENST00000495497 ZNF81P51508 661 aa16.57■□□□□ 0.24
HDAC4-212ENST00000495497 ROM1Q03395 351 aa16.57■□□□□ 0.24
HDAC4-212ENST00000495497 RIPK1Q13546 671 aa16.57■□□□□ 0.24
HDAC4-212ENST00000495497 TSTQ16762 297 aaKnown RBP16.57■□□□□ 0.24
HDAC4-212ENST00000495497 PRSS57Q6UWY2 283 aa16.57■□□□□ 0.24
HDAC4-212ENST00000495497 Q6ZR03 302 aa16.57■□□□□ 0.24
HDAC4-212ENST00000495497 PLEKHG7Q6ZR37 379 aa16.57■□□□□ 0.24
HDAC4-212ENST00000495497 ZNF679Q8IYX0 411 aa16.57■□□□□ 0.24
HDAC4-212ENST00000495497 BHLHE23Q8NDY6 225 aa16.57■□□□□ 0.24
HDAC4-212ENST00000495497 OR2T27Q8NH04 317 aa16.57■□□□□ 0.24
HDAC4-212ENST00000495497 PGAM5Q96HS1 289 aa16.57■□□□□ 0.24
HDAC4-212ENST00000495497 MRM2Q9UI43 246 aaKnown RBP16.57■□□□□ 0.24
HDAC4-212ENST00000495497 CREBBPQ92793 2442 aa16.57■□□□□ 0.24
HDAC4-212ENST00000495497 ARID1AO14497 2285 aa16.57■□□□□ 0.24
HDAC4-212ENST00000495497 PLSCR5A0PG75 271 aa16.56■□□□□ 0.24
HDAC4-212ENST00000495497 TRIM64A6NGJ6 449 aa16.56■□□□□ 0.24
HDAC4-212ENST00000495497 TRIM64BA6NI03 449 aa16.56■□□□□ 0.24
HDAC4-212ENST00000495497 SNTNA6NMZ2 147 aa16.56■□□□□ 0.24
HDAC4-212ENST00000495497 LYNX1G3V0Z9 82 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms