RNA–Protein interactions for RNA: ENST00000495190.1

VPS8-226, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 756 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-226ENST00000495190 CSPG4P5Q96PW8 444 aa4.05□□□□□ -1.76
VPS8-226ENST00000495190 TRNT1Q96Q11 434 aaKnown RBP4.05□□□□□ -1.76
VPS8-226ENST00000495190 CITED1Q99966 193 aa4.05□□□□□ -1.76
VPS8-226ENST00000495190 SRRQ9GZT4 340 aa4.05□□□□□ -1.76
VPS8-226ENST00000495190 COA1Q9GZY4 146 aa4.05□□□□□ -1.76
VPS8-226ENST00000495190 TRIM45Q9H8W5 580 aaPredicted RBP4.05□□□□□ -1.76
VPS8-226ENST00000495190 CAB39LQ9H9S4 337 aa4.05□□□□□ -1.76
VPS8-226ENST00000495190 FOLH1BQ9HBA9 442 aa4.05□□□□□ -1.76
VPS8-226ENST00000495190 IFT46Q9NQC8 304 aa4.05□□□□□ -1.76
VPS8-226ENST00000495190 AIG1Q9NVV5 245 aa4.05□□□□□ -1.76
VPS8-226ENST00000495190 NUFIP1Q9UHK0 495 aaKnown RBP4.05□□□□□ -1.76
VPS8-226ENST00000495190 KIF25Q9UIL4 384 aa4.05□□□□□ -1.76
VPS8-226ENST00000495190 HES2Q9Y543 173 aa4.05□□□□□ -1.76
VPS8-226ENST00000495190 U3KQ87 197 aa4.05□□□□□ -1.76
VPS8-226ENST00000495190 FOCADQ5VW36 1801 aa4.05□□□□□ -1.76
VPS8-226ENST00000495190 RGPD3A6NKT7 1758 aaPredicted RBP4.04□□□□□ -1.76
VPS8-226ENST00000495190 RGPD4Q7Z3J3 1758 aa4.04□□□□□ -1.76
VPS8-226ENST00000495190 DOT1LQ8TEK3 1739 aa4.04□□□□□ -1.76
VPS8-226ENST00000495190 E5RI56 91 aa4.04□□□□□ -1.76
VPS8-226ENST00000495190 I3L521 148 aa4.04□□□□□ -1.76
VPS8-226ENST00000495190 WWP2O00308 870 aa4.04□□□□□ -1.76
VPS8-226ENST00000495190 ABCD4O14678 606 aa4.04□□□□□ -1.76
VPS8-226ENST00000495190 ORC5O43913 435 aa4.04□□□□□ -1.76
VPS8-226ENST00000495190 CACNG3O60359 315 aa4.04□□□□□ -1.76
VPS8-226ENST00000495190 LYPD3O95274 346 aa4.04□□□□□ -1.76
VPS8-226ENST00000495190 SNAPINO95295 136 aa4.04□□□□□ -1.76
VPS8-226ENST00000495190 IFNA14P01570 189 aa4.04□□□□□ -1.76
VPS8-226ENST00000495190 HLA-DQB1P01920 261 aa4.04□□□□□ -1.76
VPS8-226ENST00000495190 HSPB1P04792 205 aaKnown RBP4.04□□□□□ -1.76
VPS8-226ENST00000495190 CDK1P06493 297 aa4.04□□□□□ -1.76
VPS8-226ENST00000495190 STSP08842 583 aa4.04□□□□□ -1.76
VPS8-226ENST00000495190 DUX4L4P0CJ87 422 aa4.04□□□□□ -1.76
VPS8-226ENST00000495190 CALCBP10092 127 aa4.04□□□□□ -1.76
VPS8-226ENST00000495190 HLA-EP13747 358 aa4.04□□□□□ -1.76
VPS8-226ENST00000495190 NCK1P16333 377 aa4.04□□□□□ -1.76
VPS8-226ENST00000495190 MAGP20916 626 aa4.04□□□□□ -1.76
VPS8-226ENST00000495190 FMO3P31513 532 aa4.04□□□□□ -1.76
VPS8-226ENST00000495190 CA5AP35218 305 aa4.04□□□□□ -1.76
VPS8-226ENST00000495190 ARL2P36404 184 aa4.04□□□□□ -1.76
VPS8-226ENST00000495190 MAGEA2P43356 314 aa4.04□□□□□ -1.76
VPS8-226ENST00000495190 RGS6P49758 472 aa4.04□□□□□ -1.76
VPS8-226ENST00000495190 TPMTP51580 245 aa4.04□□□□□ -1.76
VPS8-226ENST00000495190 OR4D2P58180 307 aa4.04□□□□□ -1.76
VPS8-226ENST00000495190 TAS2R39P59534 338 aa4.04□□□□□ -1.76
VPS8-226ENST00000495190 RRAS2P62070 204 aaPredicted RBP4.04□□□□□ -1.76
VPS8-226ENST00000495190 POLR2GP62487 172 aaKnown RBP eCLIP4.04□□□□□ -1.76
VPS8-226ENST00000495190 MGAT3Q09327 533 aa4.04□□□□□ -1.76
VPS8-226ENST00000495190 DGCR6Q14129 220 aa4.04□□□□□ -1.76
VPS8-226ENST00000495190 CAPRIN1Q14444 709 aaKnown RBP4.04□□□□□ -1.76
VPS8-226ENST00000495190 MXD4Q14582 209 aaPredicted RBP4.04□□□□□ -1.76
VPS8-226ENST00000495190 AANATQ16613 207 aa4.04□□□□□ -1.76
VPS8-226ENST00000495190 KYAT1Q16773 422 aa4.04□□□□□ -1.76
VPS8-226ENST00000495190 AFTPHQ6ULP2 937 aa4.04□□□□□ -1.76
VPS8-226ENST00000495190 SPESP1Q6UW49 350 aa4.04□□□□□ -1.76
VPS8-226ENST00000495190 TFAP2EQ6VUC0 442 aa4.04□□□□□ -1.76
VPS8-226ENST00000495190 C16orf62Q7Z3J2 963 aa4.04□□□□□ -1.76
VPS8-226ENST00000495190 GALNT10Q86SR1 603 aa4.04□□□□□ -1.76
VPS8-226ENST00000495190 VASH2Q86V25 355 aa4.04□□□□□ -1.76
VPS8-226ENST00000495190 CLDN22Q8N7P3 220 aa4.04□□□□□ -1.76
VPS8-226ENST00000495190 DNAAF3Q8N9W5 541 aa4.04□□□□□ -1.76
VPS8-226ENST00000495190 TTC29Q8NA56 475 aaPredicted RBP4.04□□□□□ -1.76
VPS8-226ENST00000495190 DENND6BQ8NEG7 585 aa4.04□□□□□ -1.76
VPS8-226ENST00000495190 OR4M2Q8NGB6 313 aa4.04□□□□□ -1.76
VPS8-226ENST00000495190 OR9I1Q8NGQ6 314 aa4.04□□□□□ -1.76
VPS8-226ENST00000495190 RHEBL1Q8TAI7 183 aa4.04□□□□□ -1.76
VPS8-226ENST00000495190 FANK1Q8TC84 345 aa4.04□□□□□ -1.76
VPS8-226ENST00000495190 ANKRD49Q8WVL7 239 aa4.04□□□□□ -1.76
VPS8-226ENST00000495190 SGTBQ96EQ0 304 aa4.04□□□□□ -1.76
VPS8-226ENST00000495190 PYURFQ96I23 114 aa4.04□□□□□ -1.76
VPS8-226ENST00000495190 AKR1E2Q96JD6 320 aa4.04□□□□□ -1.76
VPS8-226ENST00000495190 TSGA13Q96PP4 275 aa4.04□□□□□ -1.76
VPS8-226ENST00000495190 OMDQ99983 421 aa4.04□□□□□ -1.76
VPS8-226ENST00000495190 MAPKAP1Q9BPZ7 522 aa4.04□□□□□ -1.76
VPS8-226ENST00000495190 MARVELD1Q9BSK0 173 aa4.04□□□□□ -1.76
VPS8-226ENST00000495190 COPS4Q9BT78 406 aa4.04□□□□□ -1.76
VPS8-226ENST00000495190 CDCA4Q9BXL8 241 aa4.04□□□□□ -1.76
VPS8-226ENST00000495190 PORCNQ9H237 461 aa4.04□□□□□ -1.76
VPS8-226ENST00000495190 Q9H3A6 140 aa4.04□□□□□ -1.76
VPS8-226ENST00000495190 PPDPFQ9H3Y8 114 aa4.04□□□□□ -1.76
VPS8-226ENST00000495190 PIGUQ9H490 435 aa4.04□□□□□ -1.76
VPS8-226ENST00000495190 POPDC3Q9HBV1 291 aa4.04□□□□□ -1.76
VPS8-226ENST00000495190 RBFOX1Q9NWB1 397 aaKnown RBP4.04□□□□□ -1.76
VPS8-226ENST00000495190 SNX6Q9UNH7 406 aa4.04□□□□□ -1.76
VPS8-226ENST00000495190 PRELID3BQ9Y3B1 194 aa4.04□□□□□ -1.76
VPS8-226ENST00000495190 PPIAL4AQ9Y536 164 aa4.04□□□□□ -1.76
VPS8-226ENST00000495190 HSPB11Q9Y547 144 aa4.04□□□□□ -1.76
VPS8-226ENST00000495190 DNAJC15Q9Y5T4 150 aa4.04□□□□□ -1.76
VPS8-226ENST00000495190 SPACA6W5XKT8 324 aa4.04□□□□□ -1.76
VPS8-226ENST00000495190 NRCAMQ92823 1304 aa4.03□□□□□ -1.76
VPS8-226ENST00000495190 PPIAL4CA0A0B4J2A2 164 aa4.03□□□□□ -1.76
VPS8-226ENST00000495190 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.03□□□□□ -1.76
VPS8-226ENST00000495190 A0A1B0GVI7 797 aa4.03□□□□□ -1.76
VPS8-226ENST00000495190 LINC00854A0A1B0GVQ3 168 aa4.03□□□□□ -1.76
VPS8-226ENST00000495190 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.03□□□□□ -1.76
VPS8-226ENST00000495190 PQLC2LA1A4F0 135 aa4.03□□□□□ -1.76
VPS8-226ENST00000495190 OR6C65A6NJZ3 312 aa4.03□□□□□ -1.76
VPS8-226ENST00000495190 ZNF98A6NK75 572 aa4.03□□□□□ -1.76
VPS8-226ENST00000495190 M0QYV0 167 aa4.03□□□□□ -1.76
VPS8-226ENST00000495190 BTN3A3O00478 584 aa4.03□□□□□ -1.76
VPS8-226ENST00000495190 CLDN5O00501 218 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms