RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 TCRBV5S2A0A599 114 aa8.06□□□□□ -1.12
MSH5-218ENST00000494646 IQCF6A8MYZ5 107 aa8.06□□□□□ -1.12
MSH5-218ENST00000494646 J3QLI3 93 aa8.06□□□□□ -1.12
MSH5-218ENST00000494646 BHLHE40O14503 412 aa8.06□□□□□ -1.12
MSH5-218ENST00000494646 GYPBP06028 91 aa8.06□□□□□ -1.12
MSH5-218ENST00000494646 SRP9P49458 86 aaKnown RBP8.06□□□□□ -1.12
MSH5-218ENST00000494646 MNAT1P51948 309 aa8.06□□□□□ -1.12
MSH5-218ENST00000494646 TPTEP56180 551 aa8.06□□□□□ -1.12
MSH5-218ENST00000494646 HOXA4Q00056 320 aaPredicted RBP8.06□□□□□ -1.12
MSH5-218ENST00000494646 TRAP1Q12931 704 aaKnown RBP8.06□□□□□ -1.12
MSH5-218ENST00000494646 MALLQ13021 153 aa8.06□□□□□ -1.12
MSH5-218ENST00000494646 SCGB2A2Q13296 93 aa8.06□□□□□ -1.12
MSH5-218ENST00000494646 MICAQ29983 383 aa8.06□□□□□ -1.12
MSH5-218ENST00000494646 SPATS1Q496A3 300 aa8.06□□□□□ -1.12
MSH5-218ENST00000494646 TMEM155Q4W5P6 130 aa8.06□□□□□ -1.12
MSH5-218ENST00000494646 DMRTA1Q5VZB9 504 aa8.06□□□□□ -1.12
MSH5-218ENST00000494646 ZNF770Q6IQ21 691 aaPredicted RBP8.06□□□□□ -1.12
MSH5-218ENST00000494646 C12orf54Q6X4T0 127 aa8.06□□□□□ -1.12
MSH5-218ENST00000494646 COLCA1Q6ZS62 124 aa8.06□□□□□ -1.12
MSH5-218ENST00000494646 RASSF6Q6ZTQ3 369 aa8.06□□□□□ -1.12
MSH5-218ENST00000494646 PGAP1Q75T13 922 aa8.06□□□□□ -1.12
MSH5-218ENST00000494646 SPATC1Q76KD6 591 aa8.06□□□□□ -1.12
MSH5-218ENST00000494646 DHFR2Q86XF0 187 aa8.06□□□□□ -1.12
MSH5-218ENST00000494646 LINC00471Q8N535 108 aa8.06□□□□□ -1.12
MSH5-218ENST00000494646 SPICQ8N5J4 248 aa8.06□□□□□ -1.12
MSH5-218ENST00000494646 ZNF511Q8NB15 262 aa8.06□□□□□ -1.12
MSH5-218ENST00000494646 AQP11Q8NBQ7 271 aa8.06□□□□□ -1.12
MSH5-218ENST00000494646 C19orf18Q8NEA5 215 aa8.06□□□□□ -1.12
MSH5-218ENST00000494646 OR52L1Q8NGH7 329 aa8.06□□□□□ -1.12
MSH5-218ENST00000494646 OR4C15Q8NGM1 316 aa8.06□□□□□ -1.12
MSH5-218ENST00000494646 OR4Q3Q8NH05 313 aa8.06□□□□□ -1.12
MSH5-218ENST00000494646 CLPTM1LQ96KA5 538 aa8.06□□□□□ -1.12
MSH5-218ENST00000494646 SLC6A7Q99884 636 aa8.06□□□□□ -1.12
MSH5-218ENST00000494646 ATF6BQ99941 703 aa8.06□□□□□ -1.12
MSH5-218ENST00000494646 TSSK6Q9BXA6 273 aa8.06□□□□□ -1.12
MSH5-218ENST00000494646 TRIM15Q9C019 465 aa8.06□□□□□ -1.12
MSH5-218ENST00000494646 PNRC2Q9NPJ4 139 aaKnown RBP8.06□□□□□ -1.12
MSH5-218ENST00000494646 CENPMQ9NSP4 180 aa8.06□□□□□ -1.12
MSH5-218ENST00000494646 TBC1D23Q9NUY8 699 aa8.06□□□□□ -1.12
MSH5-218ENST00000494646 IL20Q9NYY1 176 aa8.06□□□□□ -1.12
MSH5-218ENST00000494646 ATPIF1Q9UII2 106 aa8.06□□□□□ -1.12
MSH5-218ENST00000494646 CDH10Q9Y6N8 788 aa8.06□□□□□ -1.12
MSH5-218ENST00000494646 TRRAPQ9Y4A5 3859 aa8.05□□□□□ -1.12
MSH5-218ENST00000494646 C5orf63A6NC05 138 aa8.05□□□□□ -1.12
MSH5-218ENST00000494646 CEACAM18A8MTB9 384 aa8.05□□□□□ -1.12
MSH5-218ENST00000494646 J3QW42 95 aa8.05□□□□□ -1.12
MSH5-218ENST00000494646 ZNF593O00488 134 aaPredicted RBP8.05□□□□□ -1.12
MSH5-218ENST00000494646 SOX14O95416 240 aa8.05□□□□□ -1.12
MSH5-218ENST00000494646 SPARCP09486 303 aa8.05□□□□□ -1.12
MSH5-218ENST00000494646 WNT2P09544 360 aa8.05□□□□□ -1.12
MSH5-218ENST00000494646 T-ENOLP0DO92 83 aa8.05□□□□□ -1.12
MSH5-218ENST00000494646 CLUP10909 449 aa8.05□□□□□ -1.12
MSH5-218ENST00000494646 PSKH1P11801 424 aa8.05□□□□□ -1.12
MSH5-218ENST00000494646 CA6P23280 308 aa8.05□□□□□ -1.12
MSH5-218ENST00000494646 ANOS1P23352 680 aa8.05□□□□□ -1.12
MSH5-218ENST00000494646 GATA3P23771 443 aa8.05□□□□□ -1.12
MSH5-218ENST00000494646 MDH2P40926 338 aaKnown RBP8.05□□□□□ -1.12
MSH5-218ENST00000494646 PRKXP51817 358 aa8.05□□□□□ -1.12
MSH5-218ENST00000494646 ECH1Q13011 328 aa8.05□□□□□ -1.12
MSH5-218ENST00000494646 ZNF154Q13106 437 aa8.05□□□□□ -1.12
MSH5-218ENST00000494646 MAB21L1Q13394 359 aa8.05□□□□□ -1.12
MSH5-218ENST00000494646 CRMP1Q14194 572 aa8.05□□□□□ -1.12
MSH5-218ENST00000494646 TRIM25Q14258 630 aaKnown RBP8.05□□□□□ -1.12
MSH5-218ENST00000494646 TAF13Q15543 124 aa8.05□□□□□ -1.12
MSH5-218ENST00000494646 SNAI3Q3KNW1 292 aa8.05□□□□□ -1.12
MSH5-218ENST00000494646 KRTAP27-1Q3LI81 207 aa8.05□□□□□ -1.12
MSH5-218ENST00000494646 PRAMEF6Q5VXH4 476 aa8.05□□□□□ -1.12
MSH5-218ENST00000494646 RPL13AP3Q6NVV1 102 aa8.05□□□□□ -1.12
MSH5-218ENST00000494646 DCXRQ7Z4W1 244 aa8.05□□□□□ -1.12
MSH5-218ENST00000494646 BCL6BQ8N143 479 aaPredicted RBP8.05□□□□□ -1.12
MSH5-218ENST00000494646 BPIFB2Q8N4F0 458 aa8.05□□□□□ -1.12
MSH5-218ENST00000494646 TEX29Q8N6K0 151 aa8.05□□□□□ -1.12
MSH5-218ENST00000494646 DEFB108BQ8NET1 73 aa8.05□□□□□ -1.12
MSH5-218ENST00000494646 SEMA6DQ8NFY4 1073 aa8.05□□□□□ -1.12
MSH5-218ENST00000494646 OR10S1Q8NGN2 331 aa8.05□□□□□ -1.12
MSH5-218ENST00000494646 OR2AE1Q8NHA4 323 aa8.05□□□□□ -1.12
MSH5-218ENST00000494646 SPRYD4Q8WW59 207 aaPredicted RBP8.05□□□□□ -1.12
MSH5-218ENST00000494646 SPTSSAQ969W0 71 aa8.05□□□□□ -1.12
MSH5-218ENST00000494646 OTULINQ96BN8 352 aa8.05□□□□□ -1.12
MSH5-218ENST00000494646 MED20Q9H944 212 aa8.05□□□□□ -1.12
MSH5-218ENST00000494646 UFSP2Q9NUQ7 469 aa8.05□□□□□ -1.12
MSH5-218ENST00000494646 ARMC1Q9NVT9 282 aa8.05□□□□□ -1.12
MSH5-218ENST00000494646 SAMHD1Q9Y3Z3 626 aaKnown RBP8.05□□□□□ -1.12
MSH5-218ENST00000494646 PPIAL4AQ9Y536 164 aa8.05□□□□□ -1.12
MSH5-218ENST00000494646 AUP1Q9Y679 476 aa8.05□□□□□ -1.12
MSH5-218ENST00000494646 PPIAL4EA0A075B759 164 aa8.04□□□□□ -1.12
MSH5-218ENST00000494646 IGHV3OR16-10A0A075B7F0 116 aa8.04□□□□□ -1.12
MSH5-218ENST00000494646 GGT3PA6NGU5 568 aa8.04□□□□□ -1.12
MSH5-218ENST00000494646 F5H0A9 414 aaPredicted RBP8.04□□□□□ -1.12
MSH5-218ENST00000494646 PPIAL4DF5H284 164 aa8.04□□□□□ -1.12
MSH5-218ENST00000494646 TRIM77I1YAP6 450 aa8.04□□□□□ -1.12
MSH5-218ENST00000494646 M0R135 149 aa8.04□□□□□ -1.12
MSH5-218ENST00000494646 PPIAL4FP0DN26 164 aa8.04□□□□□ -1.12
MSH5-218ENST00000494646 SLC2A1P11166 492 aa8.04□□□□□ -1.12
MSH5-218ENST00000494646 IRF2P14316 349 aa8.04□□□□□ -1.12
MSH5-218ENST00000494646 RPS2P15880 293 aaKnown RBP8.04□□□□□ -1.12
MSH5-218ENST00000494646 ZNF12P17014 697 aa8.04□□□□□ -1.12
MSH5-218ENST00000494646 FPR2P25090 351 aa8.04□□□□□ -1.12
MSH5-218ENST00000494646 FMO3P31513 532 aa8.04□□□□□ -1.12
MSH5-218ENST00000494646 CD80P33681 288 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms