RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 THBS2P35442 1172 aa28.05■■■□□ 2.08
CBX4-203ENST00000494546 SLC6A9P48067 706 aa28.05■■■□□ 2.08
CBX4-203ENST00000494546 MALLQ13021 153 aa28.05■■■□□ 2.08
CBX4-203ENST00000494546 GK2Q14410 553 aaPredicted RBP28.05■■■□□ 2.08
CBX4-203ENST00000494546 SLC27A4Q6P1M0 643 aa28.05■■■□□ 2.08
CBX4-203ENST00000494546 ZNF283Q8N7M2 679 aa28.05■■■□□ 2.08
CBX4-203ENST00000494546 OTULINQ96BN8 352 aa28.05■■■□□ 2.08
CBX4-203ENST00000494546 YY1AP1Q9H869 796 aa28.05■■■□□ 2.08
CBX4-203ENST00000494546 TANC2Q9HCD6 1990 aa28.05■■■□□ 2.08
CBX4-203ENST00000494546 IQCF6A8MYZ5 107 aa28.04■■■□□ 2.08
CBX4-203ENST00000494546 ZNF593O00488 134 aaPredicted RBP28.04■■■□□ 2.08
CBX4-203ENST00000494546 PLPP2O43688 288 aa28.04■■■□□ 2.08
CBX4-203ENST00000494546 FKBP6O75344 327 aa28.04■■■□□ 2.08
CBX4-203ENST00000494546 SBK2P0C263 348 aa28.04■■■□□ 2.08
CBX4-203ENST00000494546 SELEP16581 610 aa28.04■■■□□ 2.08
CBX4-203ENST00000494546 GRK5P34947 590 aa28.04■■■□□ 2.08
CBX4-203ENST00000494546 CBX1P83916 185 aa28.04■■■□□ 2.08
CBX4-203ENST00000494546 FAHD2BQ6P2I3 314 aaPredicted RBP28.04■■■□□ 2.08
CBX4-203ENST00000494546 HS3ST5Q8IZT8 346 aa28.04■■■□□ 2.08
CBX4-203ENST00000494546 TMEM158Q8WZ71 300 aa28.04■■■□□ 2.08
CBX4-203ENST00000494546 FAHD2AQ96GK7 314 aa28.04■■■□□ 2.08
CBX4-203ENST00000494546 COPS4Q9BT78 406 aa28.04■■■□□ 2.08
CBX4-203ENST00000494546 MED20Q9H944 212 aa28.04■■■□□ 2.08
CBX4-203ENST00000494546 DDX28Q9NUL7 540 aaKnown RBP28.04■■■□□ 2.08
CBX4-203ENST00000494546 TCRBV3S1A0A5B6 114 aa28.03■■■□□ 2.08
CBX4-203ENST00000494546 FAM183AA6NL82 134 aa28.03■■■□□ 2.08
CBX4-203ENST00000494546 H0YL77 283 aa28.03■■■□□ 2.08
CBX4-203ENST00000494546 SLCO4A1Q96BD0 722 aa28.03■■■□□ 2.08
CBX4-203ENST00000494546 SLC30A2Q9BRI3 323 aa28.03■■■□□ 2.08
CBX4-203ENST00000494546 CENPMQ9NSP4 180 aa28.03■■■□□ 2.08
CBX4-203ENST00000494546 IGHV2-70P01814 119 aa28.02■■■□□ 2.08
CBX4-203ENST00000494546 TAF13Q15543 124 aa28.02■■■□□ 2.08
CBX4-203ENST00000494546 PGAP1Q75T13 922 aa28.02■■■□□ 2.08
CBX4-203ENST00000494546 SLAMF6Q96DU3 332 aa28.02■■■□□ 2.08
CBX4-203ENST00000494546 MEGF10Q96KG7 1140 aa28.02■■■□□ 2.08
CBX4-203ENST00000494546 ZNF556Q9HAH1 456 aa28.02■■■□□ 2.08
CBX4-203ENST00000494546 TMEM100Q9NV29 134 aa28.02■■■□□ 2.08
CBX4-203ENST00000494546 DYSFO75923 2080 aa28.01■■■□□ 2.07
CBX4-203ENST00000494546 GSC2O15499 205 aa28.01■■■□□ 2.07
CBX4-203ENST00000494546 PRKACGP22612 351 aa28.01■■■□□ 2.07
CBX4-203ENST00000494546 BLVRAP53004 296 aa28.01■■■□□ 2.07
CBX4-203ENST00000494546 PCK2Q16822 640 aa28.01■■■□□ 2.07
CBX4-203ENST00000494546 SPATC1Q76KD6 591 aa28.01■■■□□ 2.07
CBX4-203ENST00000494546 MRPL21Q7Z2W9 205 aaKnown RBP28.01■■■□□ 2.07
CBX4-203ENST00000494546 CADM1Q9BY67 442 aaKnown RBP28.01■■■□□ 2.07
CBX4-203ENST00000494546 GCM1Q9NP62 436 aa28.01■■■□□ 2.07
CBX4-203ENST00000494546 DNAJB9Q9UBS3 223 aa28.01■■■□□ 2.07
CBX4-203ENST00000494546 PCDHB10Q9UN67 800 aa28.01■■■□□ 2.07
CBX4-203ENST00000494546 IGHV3-64DA0A0J9YX35 117 aa28■■■□□ 2.07
CBX4-203ENST00000494546 MLNRO43193 412 aa28■■■□□ 2.07
CBX4-203ENST00000494546 SRP9P49458 86 aaKnown RBP28■■■□□ 2.07
CBX4-203ENST00000494546 SRSF2Q01130 221 aaKnown RBP28■■■□□ 2.07
CBX4-203ENST00000494546 BNIP1Q12981 228 aa28■■■□□ 2.07
CBX4-203ENST00000494546 GINS1Q14691 196 aa28■■■□□ 2.07
CBX4-203ENST00000494546 SNAI3Q3KNW1 292 aa28■■■□□ 2.07
CBX4-203ENST00000494546 TEX30Q5JUR7 227 aa28■■■□□ 2.07
CBX4-203ENST00000494546 LINC01590Q5TEZ4 76 aa28■■■□□ 2.07
CBX4-203ENST00000494546 SHQ1Q6PI26 577 aaKnown RBP28■■■□□ 2.07
CBX4-203ENST00000494546 SPATA3Q8NHX4 192 aa28■■■□□ 2.07
CBX4-203ENST00000494546 SPRYD4Q8WW59 207 aaPredicted RBP28■■■□□ 2.07
CBX4-203ENST00000494546 N6AMT1Q9Y5N5 214 aa28■■■□□ 2.07
CBX4-203ENST00000494546 F5H5P2 479 aa27.99■■■□□ 2.07
CBX4-203ENST00000494546 PNPP00491 289 aa27.99■■■□□ 2.07
CBX4-203ENST00000494546 HLA-DPB1P04440 258 aa27.99■■■□□ 2.07
CBX4-203ENST00000494546 MMP16P51512 607 aa27.99■■■□□ 2.07
CBX4-203ENST00000494546 PRKXP51817 358 aa27.99■■■□□ 2.07
CBX4-203ENST00000494546 BTG1P62324 171 aa27.99■■■□□ 2.07
CBX4-203ENST00000494546 DRAM2Q6UX65 266 aa27.99■■■□□ 2.07
CBX4-203ENST00000494546 ZNF420Q8TAQ5 688 aaPredicted RBP27.99■■■□□ 2.07
CBX4-203ENST00000494546 ST7LQ8TDW4 575 aa27.99■■■□□ 2.07
CBX4-203ENST00000494546 SIGLEC11Q96RL6 698 aa27.99■■■□□ 2.07
CBX4-203ENST00000494546 OR51V1Q9H2C8 321 aa27.99■■■□□ 2.07
CBX4-203ENST00000494546 G6PC2Q9NQR9 355 aa27.99■■■□□ 2.07
CBX4-203ENST00000494546 OSMP13725 252 aa27.98■■■□□ 2.07
CBX4-203ENST00000494546 PAICSP22234 425 aaKnown RBP27.98■■■□□ 2.07
CBX4-203ENST00000494546 OTX1P32242 354 aaPredicted RBP27.98■■■□□ 2.07
CBX4-203ENST00000494546 EIF2B1Q14232 305 aaKnown RBP27.98■■■□□ 2.07
CBX4-203ENST00000494546 ERI1Q8IV48 349 aaKnown RBP27.98■■■□□ 2.07
CBX4-203ENST00000494546 PHC2Q8IXK0 858 aa27.98■■■□□ 2.07
CBX4-203ENST00000494546 SPICQ8N5J4 248 aa27.98■■■□□ 2.07
CBX4-203ENST00000494546 PAPD5Q8NDF8 572 aaKnown RBP27.98■■■□□ 2.07
CBX4-203ENST00000494546 OR6N2Q8NGY6 317 aa27.98■■■□□ 2.07
CBX4-203ENST00000494546 INTS14Q96SY0 518 aa27.98■■■□□ 2.07
CBX4-203ENST00000494546 KCNJ15Q99712 375 aa27.98■■■□□ 2.07
CBX4-203ENST00000494546 METTL17Q9H7H0 456 aaPredicted RBP27.98■■■□□ 2.07
CBX4-203ENST00000494546 COL6A5A8TX70 2615 aa27.97■■■□□ 2.07
CBX4-203ENST00000494546 ZNF878C9JN71 531 aa27.97■■■□□ 2.07
CBX4-203ENST00000494546 TMEM178BH3BS89 294 aa27.97■■■□□ 2.07
CBX4-203ENST00000494546 SLC2A1P11166 492 aa27.97■■■□□ 2.07
CBX4-203ENST00000494546 ANXA8P13928 327 aa27.97■■■□□ 2.07
CBX4-203ENST00000494546 ANOS1P23352 680 aa27.97■■■□□ 2.07
CBX4-203ENST00000494546 GSTT1P30711 240 aa27.97■■■□□ 2.07
CBX4-203ENST00000494546 LCN2P80188 198 aa27.97■■■□□ 2.07
CBX4-203ENST00000494546 ZMYND11Q15326 602 aa27.97■■■□□ 2.07
CBX4-203ENST00000494546 KLHL36Q8N4N3 616 aa27.97■■■□□ 2.07
CBX4-203ENST00000494546 OR2AE1Q8NHA4 323 aa27.97■■■□□ 2.07
CBX4-203ENST00000494546 A0A0G2JMP0 313 aa27.96■■■□□ 2.07
CBX4-203ENST00000494546 A0A0X1KG70 313 aa27.96■■■□□ 2.07
CBX4-203ENST00000494546 C5orf63A6NC05 138 aa27.96■■■□□ 2.07
CBX4-203ENST00000494546 GLCEO94923 617 aa27.96■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms