RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 CCL2P13500 99 aa11.3□□□□□ -0.6
ERCC3-209ENST00000494464 MSR1P21757 451 aa11.3□□□□□ -0.6
ERCC3-209ENST00000494464 STOMP27105 288 aa11.3□□□□□ -0.6
ERCC3-209ENST00000494464 LIPAP38571 399 aa11.3□□□□□ -0.6
ERCC3-209ENST00000494464 RAD52P43351 418 aa11.3□□□□□ -0.6
ERCC3-209ENST00000494464 UCP2P55851 309 aa11.3□□□□□ -0.6
ERCC3-209ENST00000494464 PCBD1P61457 104 aa11.3□□□□□ -0.6
ERCC3-209ENST00000494464 LCN6P62502 163 aa11.3□□□□□ -0.6
ERCC3-209ENST00000494464 PSG4Q00888 419 aa11.3□□□□□ -0.6
ERCC3-209ENST00000494464 AQP6Q13520 282 aa11.3□□□□□ -0.6
ERCC3-209ENST00000494464 GGTLC2Q14390 218 aa11.3□□□□□ -0.6
ERCC3-209ENST00000494464 CARTPTQ16568 116 aa11.3□□□□□ -0.6
ERCC3-209ENST00000494464 ADCK1Q86TW2 530 aa11.3□□□□□ -0.6
ERCC3-209ENST00000494464 LRP11Q86VZ4 500 aa11.3□□□□□ -0.6
ERCC3-209ENST00000494464 NANOGP1Q8N7R0 232 aa11.3□□□□□ -0.6
ERCC3-209ENST00000494464 POM121L2Q96KW2 1035 aa11.3□□□□□ -0.6
ERCC3-209ENST00000494464 FOXN4Q96NZ1 517 aa11.3□□□□□ -0.6
ERCC3-209ENST00000494464 OR2H1Q9GZK4 316 aa11.3□□□□□ -0.6
ERCC3-209ENST00000494464 TPK1Q9H3S4 243 aa11.3□□□□□ -0.6
ERCC3-209ENST00000494464 POLE4Q9NR33 117 aa11.3□□□□□ -0.6
ERCC3-209ENST00000494464 IL20RAQ9UHF4 553 aa11.3□□□□□ -0.6
ERCC3-209ENST00000494464 IGHV4-61A0A0C4DH41 118 aa11.29□□□□□ -0.6
ERCC3-209ENST00000494464 TEX13CA0A0J9YWL9 993 aa11.29□□□□□ -0.6
ERCC3-209ENST00000494464 PPP1R3DO95685 299 aa11.29□□□□□ -0.6
ERCC3-209ENST00000494464 TXNDC12O95881 172 aa11.29□□□□□ -0.6
ERCC3-209ENST00000494464 IGHA1P01876 353 aa11.29□□□□□ -0.6
ERCC3-209ENST00000494464 SCG5P05408 212 aa11.29□□□□□ -0.6
ERCC3-209ENST00000494464 IGHV4-31P0DP07 118 aa11.29□□□□□ -0.6
ERCC3-209ENST00000494464 APEHP13798 732 aaKnown RBP11.29□□□□□ -0.6
ERCC3-209ENST00000494464 ZNF16P17020 682 aaPredicted RBP11.29□□□□□ -0.6
ERCC3-209ENST00000494464 ZNF3P17036 446 aa11.29□□□□□ -0.6
ERCC3-209ENST00000494464 MYL12AP19105 171 aa11.29□□□□□ -0.6
ERCC3-209ENST00000494464 ALDH3B1P43353 468 aa11.29□□□□□ -0.6
ERCC3-209ENST00000494464 RGS6P49758 472 aa11.29□□□□□ -0.6
ERCC3-209ENST00000494464 GZMKP49863 264 aa11.29□□□□□ -0.6
ERCC3-209ENST00000494464 KLF3P57682 345 aaPredicted RBP11.29□□□□□ -0.6
ERCC3-209ENST00000494464 SELENOVP59797 346 aa11.29□□□□□ -0.6
ERCC3-209ENST00000494464 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.29□□□□□ -0.6
ERCC3-209ENST00000494464 MLLT11Q13015 90 aaPredicted RBP11.29□□□□□ -0.6
ERCC3-209ENST00000494464 ENDOGQ14249 297 aaKnown RBP11.29□□□□□ -0.6
ERCC3-209ENST00000494464 TIMM50Q3ZCQ8 353 aa11.29□□□□□ -0.6
ERCC3-209ENST00000494464 ARMCX4Q5H9R4 360 aa11.29□□□□□ -0.6
ERCC3-209ENST00000494464 DPY19L2P2Q6ZN68 376 aa11.29□□□□□ -0.6
ERCC3-209ENST00000494464 PRIMA1Q86XR5 153 aa11.29□□□□□ -0.6
ERCC3-209ENST00000494464 C1orf174Q8IYL3 243 aa11.29□□□□□ -0.6
ERCC3-209ENST00000494464 SYNPRQ8TBG9 265 aa11.29□□□□□ -0.6
ERCC3-209ENST00000494464 UBASH3BQ8TF42 649 aa11.29□□□□□ -0.6
ERCC3-209ENST00000494464 RASD2Q96D21 266 aa11.29□□□□□ -0.6
ERCC3-209ENST00000494464 OR5M11Q96RB7 305 aa11.29□□□□□ -0.6
ERCC3-209ENST00000494464 MGLLQ99685 303 aa11.29□□□□□ -0.6
ERCC3-209ENST00000494464 DCUN1D5Q9BTE7 237 aa11.29□□□□□ -0.6
ERCC3-209ENST00000494464 WNT5BQ9H1J7 359 aa11.29□□□□□ -0.6
ERCC3-209ENST00000494464 ISYNA1Q9NPH2 558 aa11.29□□□□□ -0.6
ERCC3-209ENST00000494464 YAE1D1Q9NRH1 226 aa11.29□□□□□ -0.6
ERCC3-209ENST00000494464 TMEM160Q9NX00 188 aa11.29□□□□□ -0.6
ERCC3-209ENST00000494464 VSX1Q9NZR4 365 aaPredicted RBP11.29□□□□□ -0.6
ERCC3-209ENST00000494464 H2AFY2Q9P0M6 372 aaPredicted RBP11.29□□□□□ -0.6
ERCC3-209ENST00000494464 DUSP13Q9UII6 198 aa11.29□□□□□ -0.6
ERCC3-209ENST00000494464 GPR160Q9UJ42 338 aa11.29□□□□□ -0.6
ERCC3-209ENST00000494464 KLHL21Q9UJP4 597 aa11.29□□□□□ -0.6
ERCC3-209ENST00000494464 FZR1Q9UM11 496 aa11.29□□□□□ -0.6
ERCC3-209ENST00000494464 TIMM10BQ9Y5J6 103 aa11.29□□□□□ -0.6
ERCC3-209ENST00000494464 ABCA2Q9BZC7 2435 aa11.29□□□□□ -0.6
ERCC3-209ENST00000494464 RTTNQ86VV8 2226 aa11.29□□□□□ -0.6
ERCC3-209ENST00000494464 LOC100509620A0A075B734 347 aa11.28□□□□□ -0.6
ERCC3-209ENST00000494464 SLC22A31A6NKX4 558 aa11.28□□□□□ -0.6
ERCC3-209ENST00000494464 C12orf71A8MTZ7 269 aa11.28□□□□□ -0.6
ERCC3-209ENST00000494464 PRR23D1E9PI22 279 aaPredicted RBP11.28□□□□□ -0.6
ERCC3-209ENST00000494464 CCRL2O00421 344 aa11.28□□□□□ -0.6
ERCC3-209ENST00000494464 ARPC3O15145 178 aa11.28□□□□□ -0.6
ERCC3-209ENST00000494464 IDH3BO43837 385 aa11.28□□□□□ -0.6
ERCC3-209ENST00000494464 TACSTD2P09758 323 aa11.28□□□□□ -0.6
ERCC3-209ENST00000494464 PRR23D2P0DMB1 279 aaPredicted RBP11.28□□□□□ -0.6
ERCC3-209ENST00000494464 COX5BP10606 129 aa11.28□□□□□ -0.6
ERCC3-209ENST00000494464 CTLA4P16410 223 aa11.28□□□□□ -0.6
ERCC3-209ENST00000494464 PAICSP22234 425 aaKnown RBP11.28□□□□□ -0.6
ERCC3-209ENST00000494464 WNT5AP41221 380 aa11.28□□□□□ -0.6
ERCC3-209ENST00000494464 GDI2P50395 445 aaKnown RBP11.28□□□□□ -0.6
ERCC3-209ENST00000494464 ERVS71-1P61550 626 aa11.28□□□□□ -0.6
ERCC3-209ENST00000494464 MRPS11P82912 194 aaKnown RBP11.28□□□□□ -0.6
ERCC3-209ENST00000494464 SCRN3Q0VDG4 424 aa11.28□□□□□ -0.6
ERCC3-209ENST00000494464 DYNC1I2Q13409 638 aaKnown RBP11.28□□□□□ -0.6
ERCC3-209ENST00000494464 RIN1Q13671 783 aa11.28□□□□□ -0.6
ERCC3-209ENST00000494464 SPCS2Q15005 226 aa11.28□□□□□ -0.6
ERCC3-209ENST00000494464 SPHARQ15513 63 aa11.28□□□□□ -0.6
ERCC3-209ENST00000494464 MED22Q15528 200 aa11.28□□□□□ -0.6
ERCC3-209ENST00000494464 NKPD1Q17RQ9 610 aa11.28□□□□□ -0.6
ERCC3-209ENST00000494464 CYB5R2Q6BCY4 276 aa11.28□□□□□ -0.6
ERCC3-209ENST00000494464 PLBD1Q6P4A8 553 aa11.28□□□□□ -0.6
ERCC3-209ENST00000494464 UNQ6126/PRO20091Q6UXV3 157 aa11.28□□□□□ -0.6
ERCC3-209ENST00000494464 CPOQ8IVL8 374 aa11.28□□□□□ -0.6
ERCC3-209ENST00000494464 AKR7LQ8NHP1 331 aa11.28□□□□□ -0.6
ERCC3-209ENST00000494464 SNX33Q8WV41 574 aa11.28□□□□□ -0.6
ERCC3-209ENST00000494464 C11orf40Q8WZ69 217 aa11.28□□□□□ -0.6
ERCC3-209ENST00000494464 OPALINQ96PE5 141 aa11.28□□□□□ -0.6
ERCC3-209ENST00000494464 ZNF416Q9BWM5 594 aa11.28□□□□□ -0.6
ERCC3-209ENST00000494464 SYT4Q9H2B2 425 aa11.28□□□□□ -0.6
ERCC3-209ENST00000494464 OR51B6Q9H340 312 aa11.28□□□□□ -0.6
ERCC3-209ENST00000494464 CHCHD3Q9NX63 227 aaKnown RBP11.28□□□□□ -0.6
ERCC3-209ENST00000494464 SLCO1C1Q9NYB5 712 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms