RNA–Protein interactions for RNA: ENST00000493553.1

PRPF3-206, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-206ENST00000493553 TMEM123Q8N131 208 aa8.85□□□□□ -0.99
PRPF3-206ENST00000493553 GPR137CQ8N3F9 429 aa8.85□□□□□ -0.99
PRPF3-206ENST00000493553 TMEM178AQ8NBL3 297 aa8.85□□□□□ -0.99
PRPF3-206ENST00000493553 OR2M7Q8NG81 312 aa8.85□□□□□ -0.99
PRPF3-206ENST00000493553 OR52H1Q8NGJ2 320 aa8.85□□□□□ -0.99
PRPF3-206ENST00000493553 OR5M1Q8NGP8 315 aa8.85□□□□□ -0.99
PRPF3-206ENST00000493553 TMEM45BQ96B21 275 aa8.85□□□□□ -0.99
PRPF3-206ENST00000493553 CPNE2Q96FN4 548 aaPredicted RBP8.85□□□□□ -0.99
PRPF3-206ENST00000493553 MARVELD1Q9BSK0 173 aa8.85□□□□□ -0.99
PRPF3-206ENST00000493553 SLC25A18Q9H1K4 315 aa8.85□□□□□ -0.99
PRPF3-206ENST00000493553 RNF122Q9H9V4 155 aa8.85□□□□□ -0.99
PRPF3-206ENST00000493553 TMEM138Q9NPI0 162 aa8.85□□□□□ -0.99
PRPF3-206ENST00000493553 G6PC2Q9NQR9 355 aa8.85□□□□□ -0.99
PRPF3-206ENST00000493553 DDX28Q9NUL7 540 aaKnown RBP8.85□□□□□ -0.99
PRPF3-206ENST00000493553 MALT1Q9UDY8 824 aa8.85□□□□□ -0.99
PRPF3-206ENST00000493553 ATPIF1Q9UII2 106 aa8.85□□□□□ -0.99
PRPF3-206ENST00000493553 ING1Q9UK53 422 aaPredicted RBP8.85□□□□□ -0.99
PRPF3-206ENST00000493553 SLC22A13Q9Y226 551 aa8.85□□□□□ -0.99
PRPF3-206ENST00000493553 MRPS7Q9Y2R9 242 aaKnown RBP8.85□□□□□ -0.99
PRPF3-206ENST00000493553 NUBP2Q9Y5Y2 271 aa8.85□□□□□ -0.99
PRPF3-206ENST00000493553 CACNG2Q9Y698 323 aa8.85□□□□□ -0.99
PRPF3-206ENST00000493553 CACNA1CQ13936 2221 aa8.85□□□□□ -0.99
PRPF3-206ENST00000493553 OTOGLQ3ZCN5 2332 aa8.85□□□□□ -0.99
PRPF3-206ENST00000493553 IGKV3D-15A0A087WSY6 115 aa8.84□□□□□ -0.99
PRPF3-206ENST00000493553 A0A0U1RQV5 110 aa8.84□□□□□ -0.99
PRPF3-206ENST00000493553 LOC101059948A0A1B0GTJ6 334 aa8.84□□□□□ -0.99
PRPF3-206ENST00000493553 OR5H15A6NDH6 313 aa8.84□□□□□ -0.99
PRPF3-206ENST00000493553 DHRS7CA6NNS2 312 aa8.84□□□□□ -0.99
PRPF3-206ENST00000493553 EEF1E1O43324 174 aaKnown RBP8.84□□□□□ -0.99
PRPF3-206ENST00000493553 XRCC3O43542 346 aa8.84□□□□□ -0.99
PRPF3-206ENST00000493553 PRAF2O60831 178 aa8.84□□□□□ -0.99
PRPF3-206ENST00000493553 MTRF1O75570 445 aaKnown RBP8.84□□□□□ -0.99
PRPF3-206ENST00000493553 CCNKO75909 580 aa8.84□□□□□ -0.99
PRPF3-206ENST00000493553 FARS2O95363 451 aaKnown RBP8.84□□□□□ -0.99
PRPF3-206ENST00000493553 ACTL6AO96019 429 aa8.84□□□□□ -0.99
PRPF3-206ENST00000493553 PNPP00491 289 aa8.84□□□□□ -0.99
PRPF3-206ENST00000493553 CST2P09228 141 aa8.84□□□□□ -0.99
PRPF3-206ENST00000493553 UBBP0CG47 229 aa8.84□□□□□ -0.99
PRPF3-206ENST00000493553 PSKH1P11801 424 aa8.84□□□□□ -0.99
PRPF3-206ENST00000493553 IGFBP3P17936 291 aaPredicted RBP8.84□□□□□ -0.99
PRPF3-206ENST00000493553 RAB3AP20336 220 aa8.84□□□□□ -0.99
PRPF3-206ENST00000493553 TCEA1P23193 301 aaKnown RBP8.84□□□□□ -0.99
PRPF3-206ENST00000493553 HTR2CP28335 458 aa8.84□□□□□ -0.99
PRPF3-206ENST00000493553 BDKRB2P30411 391 aa8.84□□□□□ -0.99
PRPF3-206ENST00000493553 GNALP38405 381 aa8.84□□□□□ -0.99
PRPF3-206ENST00000493553 CLDN20P56880 219 aa8.84□□□□□ -0.99
PRPF3-206ENST00000493553 HIST1H3AP68431 136 aa8.84□□□□□ -0.99
PRPF3-206ENST00000493553 RIPPLY1Q0D2K3 151 aa8.84□□□□□ -0.99
PRPF3-206ENST00000493553 FOXO1Q12778 655 aa8.84□□□□□ -0.99
PRPF3-206ENST00000493553 OR1C1Q15619 314 aa8.84□□□□□ -0.99
PRPF3-206ENST00000493553 SGCAQ16586 387 aa8.84□□□□□ -0.99
PRPF3-206ENST00000493553 HIST2H3PS2Q5TEC6 136 aa8.84□□□□□ -0.99
PRPF3-206ENST00000493553 B3GNTL1Q67FW5 361 aaPredicted RBP8.84□□□□□ -0.99
PRPF3-206ENST00000493553 ABLIM2Q6H8Q1 611 aa8.84□□□□□ -0.99
PRPF3-206ENST00000493553 SLC25A25Q6KCM7 469 aa8.84□□□□□ -0.99
PRPF3-206ENST00000493553 HIST2H3AQ71DI3 136 aa8.84□□□□□ -0.99
PRPF3-206ENST00000493553 AAED1Q7RTV5 226 aa8.84□□□□□ -0.99
PRPF3-206ENST00000493553 CNTRLQ7Z7A1 2325 aa8.84□□□□□ -0.99
PRPF3-206ENST00000493553 DPPA2Q7Z7J5 298 aa8.84□□□□□ -0.99
PRPF3-206ENST00000493553 LINC00346Q8IVM7 164 aa8.84□□□□□ -0.99
PRPF3-206ENST00000493553 CMTM4Q8IZR5 234 aa8.84□□□□□ -0.99
PRPF3-206ENST00000493553 SLC22A24Q8N4F4 322 aa8.84□□□□□ -0.99
PRPF3-206ENST00000493553 OR5H6Q8NGV6 325 aa8.84□□□□□ -0.99
PRPF3-206ENST00000493553 SYNPRQ8TBG9 265 aa8.84□□□□□ -0.99
PRPF3-206ENST00000493553 TRIM63Q969Q1 353 aa8.84□□□□□ -0.99
PRPF3-206ENST00000493553 FAM3DQ96BQ1 224 aa8.84□□□□□ -0.99
PRPF3-206ENST00000493553 ZFP3Q96NJ6 502 aa8.84□□□□□ -0.99
PRPF3-206ENST00000493553 ABHD1Q96SE0 405 aa8.84□□□□□ -0.99
PRPF3-206ENST00000493553 TRAF4Q9BUZ4 470 aaPredicted RBP8.84□□□□□ -0.99
PRPF3-206ENST00000493553 PBOV1Q9GZY1 135 aa8.84□□□□□ -0.99
PRPF3-206ENST00000493553 SCPEP1Q9HB40 452 aa8.84□□□□□ -0.99
PRPF3-206ENST00000493553 FAM206AQ9NX38 181 aa8.84□□□□□ -0.99
PRPF3-206ENST00000493553 ASH2LQ9UBL3 628 aa8.84□□□□□ -0.99
PRPF3-206ENST00000493553 OR5V1Q9UGF6 321 aa8.84□□□□□ -0.99
PRPF3-206ENST00000493553 ZNF107Q9UII5 783 aaPredicted RBP8.84□□□□□ -0.99
PRPF3-206ENST00000493553 ITGB1BP2Q9UKP3 347 aa8.84□□□□□ -0.99
PRPF3-206ENST00000493553 MCTS1Q9ULC4 181 aaKnown RBP8.84□□□□□ -0.99
PRPF3-206ENST00000493553 FLVCR1Q9Y5Y0 555 aa8.84□□□□□ -0.99
PRPF3-206ENST00000493553 LHFPL6Q9Y693 200 aa8.84□□□□□ -0.99
PRPF3-206ENST00000493553 PCNX2A6NKB5 2137 aa8.84□□□□□ -0.99
PRPF3-206ENST00000493553 WDR87Q6ZQQ6 2873 aa8.83□□□□□ -1
PRPF3-206ENST00000493553 LINC00854A0A1B0GVQ3 168 aa8.83□□□□□ -1
PRPF3-206ENST00000493553 INMT-MINDY4F8WBC2 141 aa8.83□□□□□ -1
PRPF3-206ENST00000493553 G3V3Y1 287 aa8.83□□□□□ -1
PRPF3-206ENST00000493553 TNFSF11O14788 317 aa8.83□□□□□ -1
PRPF3-206ENST00000493553 SMAD9O15198 467 aaKnown RBP8.83□□□□□ -1
PRPF3-206ENST00000493553 NME2P1O60361 137 aa8.83□□□□□ -1
PRPF3-206ENST00000493553 CYTIPO60759 359 aa8.83□□□□□ -1
PRPF3-206ENST00000493553 SNAPC5O75971 98 aa8.83□□□□□ -1
PRPF3-206ENST00000493553 NEURL1O76050 574 aa8.83□□□□□ -1
PRPF3-206ENST00000493553 MPZL1O95297 269 aa8.83□□□□□ -1
PRPF3-206ENST00000493553 GPANK1O95872 356 aa8.83□□□□□ -1
PRPF3-206ENST00000493553 MAS1P04201 325 aa8.83□□□□□ -1
PRPF3-206ENST00000493553 SP1P08047 785 aa8.83□□□□□ -1
PRPF3-206ENST00000493553 CSF1P09603 554 aa8.83□□□□□ -1
PRPF3-206ENST00000493553 ACSM4P0C7M7 580 aa8.83□□□□□ -1
PRPF3-206ENST00000493553 FTH1P19P0C7X4 201 aa8.83□□□□□ -1
PRPF3-206ENST00000493553 LIPCP11150 499 aa8.83□□□□□ -1
PRPF3-206ENST00000493553 SPNP16150 400 aa8.83□□□□□ -1
PRPF3-206ENST00000493553 ZNF24P17028 368 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms