RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 OR8J3Q8NGG0 315 aa14.59□□□□□ -0.07
NUP50-218ENST00000493456 SYT4Q9H2B2 425 aa14.59□□□□□ -0.07
NUP50-218ENST00000493456 WDR76Q9H967 626 aa14.59□□□□□ -0.07
NUP50-218ENST00000493456 FN3KRPQ9HA64 309 aa14.59□□□□□ -0.07
NUP50-218ENST00000493456 NMNAT1Q9HAN9 279 aaPredicted RBP14.59□□□□□ -0.07
NUP50-218ENST00000493456 TMBIM4Q9HC24 238 aa14.59□□□□□ -0.07
NUP50-218ENST00000493456 UFSP2Q9NUQ7 469 aa14.59□□□□□ -0.07
NUP50-218ENST00000493456 CAB39Q9Y376 341 aaPredicted RBP14.59□□□□□ -0.07
NUP50-218ENST00000493456 TRAV38-1A0A0B4J264 116 aa14.58□□□□□ -0.08
NUP50-218ENST00000493456 FBP1P09467 338 aa14.58□□□□□ -0.08
NUP50-218ENST00000493456 SDHAP31040 664 aa14.58□□□□□ -0.08
NUP50-218ENST00000493456 TGFBR2P37173 567 aa14.58□□□□□ -0.08
NUP50-218ENST00000493456 HIST1H3AP68431 136 aa14.58□□□□□ -0.08
NUP50-218ENST00000493456 GK2Q14410 553 aaPredicted RBP14.58□□□□□ -0.08
NUP50-218ENST00000493456 TRAM2Q15035 370 aa14.58□□□□□ -0.08
NUP50-218ENST00000493456 OR8B8Q15620 311 aa14.58□□□□□ -0.08
NUP50-218ENST00000493456 MPPED2Q15777 294 aa14.58□□□□□ -0.08
NUP50-218ENST00000493456 ZBED5Q49AG3 693 aa14.58□□□□□ -0.08
NUP50-218ENST00000493456 LRRC23Q53EV4 343 aaPredicted RBP14.58□□□□□ -0.08
NUP50-218ENST00000493456 RABL3Q5HYI8 236 aa14.58□□□□□ -0.08
NUP50-218ENST00000493456 BEND6Q5SZJ8 279 aaPredicted RBP14.58□□□□□ -0.08
NUP50-218ENST00000493456 HIST2H3PS2Q5TEC6 136 aa14.58□□□□□ -0.08
NUP50-218ENST00000493456 SAMD5Q5TGI4 173 aa14.58□□□□□ -0.08
NUP50-218ENST00000493456 OTPQ5XKR4 325 aa14.58□□□□□ -0.08
NUP50-218ENST00000493456 HIST2H3AQ71DI3 136 aa14.58□□□□□ -0.08
NUP50-218ENST00000493456 PLPP7Q8NBV4 271 aa14.58□□□□□ -0.08
NUP50-218ENST00000493456 NPRL2Q8WTW4 380 aa14.58□□□□□ -0.08
NUP50-218ENST00000493456 ACOT11Q8WXI4 607 aaPredicted RBP14.58□□□□□ -0.08
NUP50-218ENST00000493456 FNDC11Q9BVV2 318 aa14.58□□□□□ -0.08
NUP50-218ENST00000493456 SLC22A4Q9H015 551 aa14.58□□□□□ -0.08
NUP50-218ENST00000493456 RERGLQ9H628 205 aa14.58□□□□□ -0.08
NUP50-218ENST00000493456 SMURF1Q9HCE7 757 aa14.58□□□□□ -0.08
NUP50-218ENST00000493456 VSX1Q9NZR4 365 aaPredicted RBP14.58□□□□□ -0.08
NUP50-218ENST00000493456 KPTNQ9Y664 436 aa14.58□□□□□ -0.08
NUP50-218ENST00000493456 TET2Q6N021 2002 aaPredicted RBP14.58□□□□□ -0.08
NUP50-218ENST00000493456 ZNF816-ZNF321PA0A0X1KG74 233 aa14.57□□□□□ -0.08
NUP50-218ENST00000493456 A0A1B0GVI7 797 aa14.57□□□□□ -0.08
NUP50-218ENST00000493456 OOEPA6NGQ2 149 aa14.57□□□□□ -0.08
NUP50-218ENST00000493456 CDC42EP2O14613 210 aa14.57□□□□□ -0.08
NUP50-218ENST00000493456 PTBP3O95758 552 aaKnown RBP14.57□□□□□ -0.08
NUP50-218ENST00000493456 FUT4P22083 530 aa14.57□□□□□ -0.08
NUP50-218ENST00000493456 ARF6P62330 175 aa14.57□□□□□ -0.08
NUP50-218ENST00000493456 EGR3Q06889 387 aa14.57□□□□□ -0.08
NUP50-218ENST00000493456 MALLQ13021 153 aa14.57□□□□□ -0.08
NUP50-218ENST00000493456 GPR139Q6DWJ6 353 aa14.57□□□□□ -0.08
NUP50-218ENST00000493456 SFRP4Q6FHJ7 346 aaPredicted RBP14.57□□□□□ -0.08
NUP50-218ENST00000493456 ZNF730Q6ZMV8 503 aa14.57□□□□□ -0.08
NUP50-218ENST00000493456 TMPRSS11FQ6ZWK6 438 aa14.57□□□□□ -0.08
NUP50-218ENST00000493456 MBOAT2Q6ZWT7 520 aa14.57□□□□□ -0.08
NUP50-218ENST00000493456 ADCK1Q86TW2 530 aa14.57□□□□□ -0.08
NUP50-218ENST00000493456 PIP4P2Q8N4L2 257 aa14.57□□□□□ -0.08
NUP50-218ENST00000493456 TPD52L3Q96J77 140 aa14.57□□□□□ -0.08
NUP50-218ENST00000493456 ZNRD1Q9P1U0 126 aa14.57□□□□□ -0.08
NUP50-218ENST00000493456 LHFPL6Q9Y693 200 aa14.57□□□□□ -0.08
NUP50-218ENST00000493456 ZNF26P17031 533 aaPredicted RBP14.56□□□□□ -0.08
NUP50-218ENST00000493456 KDELR2P33947 212 aa14.56□□□□□ -0.08
NUP50-218ENST00000493456 GPR4P46093 362 aa14.56□□□□□ -0.08
NUP50-218ENST00000493456 SELENOWP63302 87 aa14.56□□□□□ -0.08
NUP50-218ENST00000493456 OR8G1Q15617 311 aa14.56□□□□□ -0.08
NUP50-218ENST00000493456 KRTAP27-1Q3LI81 207 aa14.56□□□□□ -0.08
NUP50-218ENST00000493456 CDONQ4KMG0 1287 aa14.56□□□□□ -0.08
NUP50-218ENST00000493456 PGAP1Q75T13 922 aa14.56□□□□□ -0.08
NUP50-218ENST00000493456 BTN2A1Q7KYR7 527 aa14.56□□□□□ -0.08
NUP50-218ENST00000493456 SPRYD4Q8WW59 207 aaPredicted RBP14.56□□□□□ -0.08
NUP50-218ENST00000493456 LZICQ8WZA0 190 aa14.56□□□□□ -0.08
NUP50-218ENST00000493456 GPX7Q96SL4 187 aaPredicted RBP14.56□□□□□ -0.08
NUP50-218ENST00000493456 FXYD1O00168 92 aa14.55□□□□□ -0.08
NUP50-218ENST00000493456 OR10H3O60404 316 aa14.55□□□□□ -0.08
NUP50-218ENST00000493456 GMDSO60547 372 aa14.55□□□□□ -0.08
NUP50-218ENST00000493456 IFNW1P05000 195 aa14.55□□□□□ -0.08
NUP50-218ENST00000493456 HOXA4Q00056 320 aaPredicted RBP14.55□□□□□ -0.08
NUP50-218ENST00000493456 ECH1Q13011 328 aa14.55□□□□□ -0.08
NUP50-218ENST00000493456 HERPUD1Q15011 391 aa14.55□□□□□ -0.08
NUP50-218ENST00000493456 FAM189A2Q15884 450 aa14.55□□□□□ -0.08
NUP50-218ENST00000493456 DNM1P34Q6PK57 102 aa14.55□□□□□ -0.08
NUP50-218ENST00000493456 METAP1DQ6UB28 335 aaPredicted RBP14.55□□□□□ -0.08
NUP50-218ENST00000493456 Q6ZTK2 550 aa14.55□□□□□ -0.08
NUP50-218ENST00000493456 VMO1Q7Z5L0 202 aa14.55□□□□□ -0.08
NUP50-218ENST00000493456 PDZD9Q8IXQ8 264 aa14.55□□□□□ -0.08
NUP50-218ENST00000493456 BOLLQ8N9W6 283 aaKnown RBP14.55□□□□□ -0.08
NUP50-218ENST00000493456 PPP1R14AQ96A00 147 aa14.55□□□□□ -0.08
NUP50-218ENST00000493456 ADAT1Q9BUB4 502 aaKnown RBP14.55□□□□□ -0.08
NUP50-218ENST00000493456 NUAK2Q9H093 628 aa14.55□□□□□ -0.08
NUP50-218ENST00000493456 CNTD2Q9H8S5 307 aa14.55□□□□□ -0.08
NUP50-218ENST00000493456 NRIP3Q9NQ35 241 aa14.55□□□□□ -0.08
NUP50-218ENST00000493456 RHCGQ9UBD6 479 aa14.55□□□□□ -0.08
NUP50-218ENST00000493456 KAAG1Q9UBP8 84 aa14.55□□□□□ -0.08
NUP50-218ENST00000493456 RPUSD1Q9UJJ7 312 aaKnown RBP14.55□□□□□ -0.08
NUP50-218ENST00000493456 RPS6KA6Q9UK32 745 aa14.55□□□□□ -0.08
NUP50-218ENST00000493456 AURKCQ9UQB9 309 aa14.55□□□□□ -0.08
NUP50-218ENST00000493456 TMEM5Q9Y2B1 443 aa14.55□□□□□ -0.08
NUP50-218ENST00000493456 A0A087WUU8 490 aa14.54□□□□□ -0.08
NUP50-218ENST00000493456 FAM220BPB1ANY3 271 aa14.54□□□□□ -0.08
NUP50-218ENST00000493456 DVL1O14640 695 aa14.54□□□□□ -0.08
NUP50-218ENST00000493456 NDUFB2O95178 105 aa14.54□□□□□ -0.08
NUP50-218ENST00000493456 NPPAP01160 153 aa14.54□□□□□ -0.08
NUP50-218ENST00000493456 ACSM4P0C7M7 580 aa14.54□□□□□ -0.08
NUP50-218ENST00000493456 CRABP1P29762 137 aa14.54□□□□□ -0.08
NUP50-218ENST00000493456 YAP1P46937 504 aaKnown RBP14.54□□□□□ -0.08
NUP50-218ENST00000493456 PRSS12P56730 875 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms