RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 RPS4Y2Q8TD47 263 aa16.11■□□□□ 0.17
MCF2L-230ENST00000491028 RNF166Q96A37 237 aaPredicted RBP16.11■□□□□ 0.17
MCF2L-230ENST00000491028 APOBEC3DQ96AK3 386 aaPredicted RBP16.11■□□□□ 0.17
MCF2L-230ENST00000491028 COG8Q96MW5 612 aa16.11■□□□□ 0.17
MCF2L-230ENST00000491028 SPOCK3Q9BQ16 436 aa16.11■□□□□ 0.17
MCF2L-230ENST00000491028 NUFIP1Q9UHK0 495 aaKnown RBP16.11■□□□□ 0.17
MCF2L-230ENST00000491028 OR52A1Q9UKL2 312 aa16.11■□□□□ 0.17
MCF2L-230ENST00000491028 SPTBN1Q01082 2364 aaKnown RBP16.11■□□□□ 0.17
MCF2L-230ENST00000491028 E9PI62 339 aa16.1■□□□□ 0.17
MCF2L-230ENST00000491028 SMPD2O60906 423 aa16.1■□□□□ 0.17
MCF2L-230ENST00000491028 PNPP00491 289 aa16.1■□□□□ 0.17
MCF2L-230ENST00000491028 LALBAP00709 142 aa16.1■□□□□ 0.17
MCF2L-230ENST00000491028 LCATP04180 440 aa16.1■□□□□ 0.17
MCF2L-230ENST00000491028 WNT5AP41221 380 aa16.1■□□□□ 0.17
MCF2L-230ENST00000491028 MLLT11Q13015 90 aaPredicted RBP16.1■□□□□ 0.17
MCF2L-230ENST00000491028 ALKBH1Q13686 389 aaKnown RBP16.1■□□□□ 0.17
MCF2L-230ENST00000491028 CDK5R1Q15078 307 aa16.1■□□□□ 0.17
MCF2L-230ENST00000491028 BCL2L15Q5TBC7 163 aa16.1■□□□□ 0.17
MCF2L-230ENST00000491028 FAM57BQ71RH2 274 aa16.1■□□□□ 0.17
MCF2L-230ENST00000491028 NAA40Q86UY6 237 aa16.1■□□□□ 0.17
MCF2L-230ENST00000491028 OR2G2Q8NGZ5 317 aa16.1■□□□□ 0.17
MCF2L-230ENST00000491028 PLPPR2Q96GM1 343 aa16.1■□□□□ 0.17
MCF2L-230ENST00000491028 PGAM5Q96HS1 289 aa16.1■□□□□ 0.17
MCF2L-230ENST00000491028 RADILQ96JH8 1075 aa16.1■□□□□ 0.17
MCF2L-230ENST00000491028 MGLLQ99685 303 aa16.1■□□□□ 0.17
MCF2L-230ENST00000491028 BCL2L14Q9BZR8 327 aa16.1■□□□□ 0.17
MCF2L-230ENST00000491028 PBOV1Q9GZY1 135 aa16.1■□□□□ 0.17
MCF2L-230ENST00000491028 BRD7Q9NPI1 651 aa16.1■□□□□ 0.17
MCF2L-230ENST00000491028 ST6GALNAC2Q9UJ37 374 aa16.1■□□□□ 0.17
MCF2L-230ENST00000491028 GTF2A1LQ9UNN4 478 aa16.1■□□□□ 0.17
MCF2L-230ENST00000491028 SPEF1Q9Y4P9 236 aa16.1■□□□□ 0.17
MCF2L-230ENST00000491028 ABCD4O14678 606 aa16.09■□□□□ 0.17
MCF2L-230ENST00000491028 OGG1O15527 345 aa16.09■□□□□ 0.17
MCF2L-230ENST00000491028 CLDN1O95832 211 aa16.09■□□□□ 0.17
MCF2L-230ENST00000491028 CLPTM1O96005 669 aa16.09■□□□□ 0.17
MCF2L-230ENST00000491028 SLC2A1P11166 492 aa16.09■□□□□ 0.17
MCF2L-230ENST00000491028 JUNBP17275 347 aaPredicted RBP16.09■□□□□ 0.17
MCF2L-230ENST00000491028 TUBG1P23258 451 aa16.09■□□□□ 0.17
MCF2L-230ENST00000491028 RAD52P43351 418 aa16.09■□□□□ 0.17
MCF2L-230ENST00000491028 DOC2BQ14184 412 aa16.09■□□□□ 0.17
MCF2L-230ENST00000491028 NEDD8Q15843 81 aa16.09■□□□□ 0.17
MCF2L-230ENST00000491028 WDR38Q5JTN6 314 aa16.09■□□□□ 0.17
MCF2L-230ENST00000491028 ZNF101Q8IZC7 436 aa16.09■□□□□ 0.17
MCF2L-230ENST00000491028 OR5L1Q8NGL2 311 aa16.09■□□□□ 0.17
MCF2L-230ENST00000491028 SMIM19Q96E16 107 aa16.09■□□□□ 0.17
MCF2L-230ENST00000491028 OR10A2Q9H208 303 aa16.09■□□□□ 0.17
MCF2L-230ENST00000491028 G6PC2Q9NQR9 355 aa16.09■□□□□ 0.17
MCF2L-230ENST00000491028 TUBG2Q9NRH3 451 aa16.09■□□□□ 0.17
MCF2L-230ENST00000491028 KCNN3Q9UGI6 736 aa16.09■□□□□ 0.17
MCF2L-230ENST00000491028 ZNF391Q9UJN7 358 aa16.09■□□□□ 0.17
MCF2L-230ENST00000491028 ANKHD1Q8IWZ3 2542 aaKnown RBP16.09■□□□□ 0.17
MCF2L-230ENST00000491028 SETXQ7Z333 2677 aaKnown RBP16.09■□□□□ 0.17
MCF2L-230ENST00000491028 PRR14LQ5THK1 2151 aa16.09■□□□□ 0.17
MCF2L-230ENST00000491028 A0A0U1RQV5 110 aa16.08■□□□□ 0.16
MCF2L-230ENST00000491028 DEFB108AA8MXU0 73 aa16.08■□□□□ 0.16
MCF2L-230ENST00000491028 ATP6V1G2-DDX39BF2Z307 99 aa16.08■□□□□ 0.16
MCF2L-230ENST00000491028 TBX1O43435 398 aa16.08■□□□□ 0.16
MCF2L-230ENST00000491028 XRCC2O43543 280 aa16.08■□□□□ 0.16
MCF2L-230ENST00000491028 CD1AP06126 327 aa16.08■□□□□ 0.16
MCF2L-230ENST00000491028 CD3EP07766 207 aa16.08■□□□□ 0.16
MCF2L-230ENST00000491028 HSMCR30P0CW71 290 aa16.08■□□□□ 0.16
MCF2L-230ENST00000491028 GTF2A1P52655 376 aaPredicted RBP16.08■□□□□ 0.16
MCF2L-230ENST00000491028 UCP2P55851 309 aa16.08■□□□□ 0.16
MCF2L-230ENST00000491028 NANOS3P60323 173 aaKnown RBP16.08■□□□□ 0.16
MCF2L-230ENST00000491028 SPOCK1Q08629 439 aa16.08■□□□□ 0.16
MCF2L-230ENST00000491028 DAZAP2Q15038 168 aaPredicted RBP16.08■□□□□ 0.16
MCF2L-230ENST00000491028 TIGD6Q17RP2 521 aa16.08■□□□□ 0.16
MCF2L-230ENST00000491028 SYT6Q5T7P8 510 aaPredicted RBP16.08■□□□□ 0.16
MCF2L-230ENST00000491028 DMKNQ6E0U4 476 aaPredicted RBP16.08■□□□□ 0.16
MCF2L-230ENST00000491028 ZNF704Q6ZNC4 412 aaPredicted RBP16.08■□□□□ 0.16
MCF2L-230ENST00000491028 RFPL4BQ6ZWI9 263 aa16.08■□□□□ 0.16
MCF2L-230ENST00000491028 ELMOD2Q8IZ81 293 aa16.08■□□□□ 0.16
MCF2L-230ENST00000491028 PIAS4Q8N2W9 510 aaPredicted RBP16.08■□□□□ 0.16
MCF2L-230ENST00000491028 PRSS35Q8N3Z0 413 aa16.08■□□□□ 0.16
MCF2L-230ENST00000491028 NUP37Q8NFH4 326 aa16.08■□□□□ 0.16
MCF2L-230ENST00000491028 OR8B12Q8NGG6 310 aa16.08■□□□□ 0.16
MCF2L-230ENST00000491028 ABHD4Q8TB40 342 aa16.08■□□□□ 0.16
MCF2L-230ENST00000491028 UFD1Q92890 307 aa16.08■□□□□ 0.16
MCF2L-230ENST00000491028 MUL1Q969V5 352 aa16.08■□□□□ 0.16
MCF2L-230ENST00000491028 OPALINQ96PE5 141 aa16.08■□□□□ 0.16
MCF2L-230ENST00000491028 RGCCQ9H4X1 137 aa16.08■□□□□ 0.16
MCF2L-230ENST00000491028 OPA3Q9H6K4 179 aa16.08■□□□□ 0.16
MCF2L-230ENST00000491028 FRRS1LQ9P0K9 344 aa16.08■□□□□ 0.16
MCF2L-230ENST00000491028 SCOCQ9UIL1 159 aa16.08■□□□□ 0.16
MCF2L-230ENST00000491028 TRBV2A0A0J9YWF9 115 aa16.07■□□□□ 0.16
MCF2L-230ENST00000491028 TMEM212A6NML5 194 aa16.07■□□□□ 0.16
MCF2L-230ENST00000491028 PLPP2O43688 288 aa16.07■□□□□ 0.16
MCF2L-230ENST00000491028 TTRP02766 147 aa16.07■□□□□ 0.16
MCF2L-230ENST00000491028 UBCP0CG48 685 aaKnown RBP16.07■□□□□ 0.16
MCF2L-230ENST00000491028 NR4A1P22736 598 aa16.07■□□□□ 0.16
MCF2L-230ENST00000491028 PSMB9P28065 219 aa16.07■□□□□ 0.16
MCF2L-230ENST00000491028 KIR3DL2P43630 455 aa16.07■□□□□ 0.16
MCF2L-230ENST00000491028 RPS23P62266 143 aaKnown RBP16.07■□□□□ 0.16
MCF2L-230ENST00000491028 MALLQ13021 153 aa16.07■□□□□ 0.16
MCF2L-230ENST00000491028 GPR50Q13585 617 aa16.07■□□□□ 0.16
MCF2L-230ENST00000491028 TPBGQ13641 420 aa16.07■□□□□ 0.16
MCF2L-230ENST00000491028 SNAI3Q3KNW1 292 aa16.07■□□□□ 0.16
MCF2L-230ENST00000491028 ARMCX4Q5H9R4 360 aa16.07■□□□□ 0.16
MCF2L-230ENST00000491028 SLC22A25Q6T423 547 aa16.07■□□□□ 0.16
MCF2L-230ENST00000491028 COMMD4Q9H0A8 199 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms